RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 RAB11FIP4Q86YS3 637 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 SLC12A7Q9Y666 1083 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ZNF213O14771 459 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 CEBPAP49715 358 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-220ENST00000529526 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 CD109Q6YHK3 1445 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 A0A087WZG4 1122 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 AMOTQ4VCS5 1084 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ADGRL1O94910 1474 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ERICH4A6NGS2 130 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 UBA5Q9GZZ9 404 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 LRPPRCP42704 1394 aaKnown RBP9.47□□□□□ -0.89
CTNND1-220ENST00000529526 ABCC11Q96J66 1382 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTNND1-220ENST00000529526 NOS1P29475 1434 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 GOLGA8BA8MQT2 603 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 SLC5A1P13866 664 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 FLIIQ13045 1269 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 TAF3Q5VWG9 929 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 CHMP4BP1P59074 171 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 MAP3K12Q12852 859 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 DCAF8L1A6NGE4 600 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 EIF3JO75822 258 aaKnown RBP9.47□□□□□ -0.89
CTNND1-220ENST00000529526 IGHDP01880 384 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 SSRP1Q08945 709 aaKnown RBP9.47□□□□□ -0.89
CTNND1-220ENST00000529526 MBIPQ9NS73 344 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 GOLGA8AA7E2F4 631 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 GOLIM4O00461 696 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 KIAA0754O94854 1291 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 GJB2P29033 226 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 CCDC96Q2M329 555 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 ZNF397Q8NF99 534 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-220ENST00000529526 TAF4BQ92750 862 aa9.47□□□□□ -0.89
CTNND1-220ENST00000529526 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 IQCEQ6IPM2 695 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-220ENST00000529526 SNRKQ9NRH2 765 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 ANO10Q9NW15 660 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 HYPKQ9NX55 129 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 LIMCH1Q9UPQ0 1083 aa9.46□□□□□ -0.89
CTNND1-220ENST00000529526 IFIT3O14879 490 aaKnown RBP9.46□□□□□ -0.9
CTNND1-220ENST00000529526 DNA2P51530 1060 aa9.46□□□□□ -0.9
CTNND1-220ENST00000529526 CLIP2Q9UDT6 1046 aa9.46□□□□□ -0.9
CTNND1-220ENST00000529526 HAND2P61296 217 aa9.46□□□□□ -0.9
CTNND1-220ENST00000529526 CCDC148Q8NFR7 591 aa9.46□□□□□ -0.9
CTNND1-220ENST00000529526 CPLX3Q8WVH0 158 aa9.46□□□□□ -0.9
CTNND1-220ENST00000529526 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
CTNND1-220ENST00000529526 HMGXB3Q12766 1538 aa9.46□□□□□ -0.9
CTNND1-220ENST00000529526 DBF4Q9UBU7 674 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-220ENST00000529526 BIN1O00499 593 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 SFPQP23246 707 aaKnown RBP eCLIP9.45□□□□□ -0.91e-8■■■□□ 15.1
CTNND1-220ENST00000529526 CASQ1P31415 396 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 ZSCAN30Q86W11 494 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 ZNF444Q8N0Y2 327 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-220ENST00000529526 CTCFLQ8NI51 663 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-220ENST00000529526 PTPRCP08575 1304 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 ANXA1P04083 346 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 RBM27Q9P2N5 1060 aaKnown RBP9.45□□□□□ -0.9
CTNND1-220ENST00000529526 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 NLRP5P59047 1200 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 HSP90AB3PQ58FF7 597 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 SCAND2PQ9GZW5 306 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-220ENST00000529526 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 IDI1Q13907 227 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 JAKMIP3Q5VZ66 844 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 ISM2Q6H9L7 571 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 EVI5LQ96CN4 794 aa9.45□□□□□ -0.9
CTNND1-220ENST00000529526 TRMT1Q9NXH9 659 aaKnown RBP9.45□□□□□ -0.9
CTNND1-220ENST00000529526 SPA17Q15506 151 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 CNNM3Q8NE01 707 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 UBXN4Q92575 508 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 HMGB1P09429 215 aaKnown RBP9.44□□□□□ -0.9
CTNND1-220ENST00000529526 TOP1P11387 765 aaKnown RBP9.44□□□□□ -0.9
CTNND1-220ENST00000529526 FSIP1Q8NA03 581 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 PDCL2Q8N4E4 241 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 RPGRQ92834 1020 aaKnown RBP9.44□□□□□ -0.9
CTNND1-220ENST00000529526 TSG101Q99816 390 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 SCAF11Q99590 1463 aaKnown RBP9.44□□□□□ -0.9
CTNND1-220ENST00000529526 FKBP15Q5T1M5 1219 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 PLEKHH1Q9ULM0 1364 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 CCDC196A0A1B0GTZ2 297 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 PPP1R42Q7Z4L9 355 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 IQCA1Q86XH1 822 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 ANKRD18AQ8IVF6 992 aa9.44□□□□□ -0.9
CTNND1-220ENST00000529526 ZRSR2Q15696 482 aaKnown RBP9.43□□□□□ -0.9
CTNND1-220ENST00000529526 TRMT1LQ7Z2T5 733 aaKnown RBP9.43□□□□□ -0.9
CTNND1-220ENST00000529526 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-220ENST00000529526 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 URI1O94763 535 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-220ENST00000529526 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms