RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 COL5A3P25940 1745 aaPredicted RBP15.14■□□□□ 0.01
C9orf135-207ENST00000529446 VAMP4O75379 141 aa15.13■□□□□ 0.01
C9orf135-207ENST00000529446 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
C9orf135-207ENST00000529446 CCDC30Q5VVM6 783 aa15.13■□□□□ 0.01
C9orf135-207ENST00000529446 LINC00116Q8NCU8 138 aa15.13■□□□□ 0.01
C9orf135-207ENST00000529446 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
C9orf135-207ENST00000529446 TSPYL6Q8N831 410 aa15.12■□□□□ 0.01
C9orf135-207ENST00000529446 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
C9orf135-207ENST00000529446 TAF1LQ8IZX4 1826 aa15.12■□□□□ 0.01
C9orf135-207ENST00000529446 C4BP0C0L5 1744 aa15.12■□□□□ 0.01
C9orf135-207ENST00000529446 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
C9orf135-207ENST00000529446 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
C9orf135-207ENST00000529446 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
C9orf135-207ENST00000529446 AK7Q96M32 723 aa15.11■□□□□ 0.01
C9orf135-207ENST00000529446 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
C9orf135-207ENST00000529446 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
C9orf135-207ENST00000529446 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
C9orf135-207ENST00000529446 SOCS7O14512 581 aa15.1■□□□□ 0.01
C9orf135-207ENST00000529446 EIF2S2P20042 333 aaKnown RBP15.1■□□□□ 0.01
C9orf135-207ENST00000529446 IL6STP40189 918 aaPredicted RBP15.1■□□□□ 0.01
C9orf135-207ENST00000529446 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
C9orf135-207ENST00000529446 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
C9orf135-207ENST00000529446 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
C9orf135-207ENST00000529446 DDX21Q9NR30 783 aaKnown RBP eCLIP15.1■□□□□ 0.01
C9orf135-207ENST00000529446 MSH5O43196 834 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 ADRA2BP18089 450 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 KCNQ4P56696 695 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 FLAD1Q8NFF5 587 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 HYPKQ9NX55 129 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 STK32BQ9NY57 414 aa15.09■□□□□ 0.01
C9orf135-207ENST00000529446 A0A087WZG4 1122 aa15.08■□□□□ 0
C9orf135-207ENST00000529446 RPS6KA4O75676 772 aa15.08■□□□□ 0
C9orf135-207ENST00000529446 A1BGP04217 495 aa15.08■□□□□ 0
C9orf135-207ENST00000529446 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0
C9orf135-207ENST00000529446 ZBTB1Q9Y2K1 713 aa15.08■□□□□ 0
C9orf135-207ENST00000529446 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
C9orf135-207ENST00000529446 GNPATO15228 680 aa15.07■□□□□ 0
C9orf135-207ENST00000529446 SSFA2P28290 1259 aa15.07■□□□□ 0
C9orf135-207ENST00000529446 PDIA6Q15084 440 aa15.07■□□□□ 0
C9orf135-207ENST00000529446 SLC15A2Q16348 729 aa15.07■□□□□ 0
C9orf135-207ENST00000529446 CHPF2Q9P2E5 772 aa15.07■□□□□ 0
C9orf135-207ENST00000529446 NBPF26B4DH59 902 aa15.06■□□□□ 0
C9orf135-207ENST00000529446 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
C9orf135-207ENST00000529446 EIF5P55010 431 aaKnown RBP15.06■□□□□ 0
C9orf135-207ENST00000529446 BRPF1P55201 1214 aaPredicted RBP15.06■□□□□ 0
C9orf135-207ENST00000529446 NBPF10Q6P3W6 841 aaKnown RBP15.06■□□□□ 0
C9orf135-207ENST00000529446 NBPF15Q8N660 670 aa15.06■□□□□ 0
C9orf135-207ENST00000529446 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
C9orf135-207ENST00000529446 RGL2O15211 777 aa15.05■□□□□ -0
C9orf135-207ENST00000529446 SLC4A2P04920 1241 aa15.05■□□□□ -0
C9orf135-207ENST00000529446 RARSP54136 660 aaKnown RBP15.05■□□□□ -0
C9orf135-207ENST00000529446 NECTIN2Q92692 538 aa15.05■□□□□ -0
C9orf135-207ENST00000529446 COL15A1P39059 1388 aa15.05■□□□□ -0
C9orf135-207ENST00000529446 QSER1Q2KHR3 1735 aa15.05■□□□□ -0
C9orf135-207ENST00000529446 MYL6BP14649 208 aa15.04■□□□□ -0
C9orf135-207ENST00000529446 ZNF827Q17R98 1081 aa15.04■□□□□ -0
C9orf135-207ENST00000529446 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
C9orf135-207ENST00000529446 LRP10Q7Z4F1 713 aa15.04■□□□□ -0
C9orf135-207ENST00000529446 SSH1Q8WYL5 1049 aa15.04■□□□□ -0
C9orf135-207ENST00000529446 ANO8Q9HCE9 1232 aaPredicted RBP15.04■□□□□ -0
C9orf135-207ENST00000529446 SMC4Q9NTJ3 1288 aa15.04■□□□□ -0
C9orf135-207ENST00000529446 KIF16BQ96L93 1317 aa15.03■□□□□ -0
C9orf135-207ENST00000529446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.03■□□□□ -0
C9orf135-207ENST00000529446 DDX58O95786 925 aaKnown RBP15.03■□□□□ -0
C9orf135-207ENST00000529446 MRPL50Q8N5N7 158 aaKnown RBP15.03■□□□□ -0
C9orf135-207ENST00000529446 MYH14Q7Z406 1995 aaKnown RBP15.03■□□□□ -0
C9orf135-207ENST00000529446 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
C9orf135-207ENST00000529446 PTPRCP08575 1304 aa15.02■□□□□ -0
C9orf135-207ENST00000529446 PROSER3Q2NL68 480 aa15.02■□□□□ -0
C9orf135-207ENST00000529446 KIF6Q6ZMV9 814 aa15.02■□□□□ -0
C9orf135-207ENST00000529446 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
C9orf135-207ENST00000529446 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
C9orf135-207ENST00000529446 CACNA1FO60840 1977 aa15.02□□□□□ -0.01
C9orf135-207ENST00000529446 ERVV-1B6SEH8 477 aa15.01□□□□□ -0.01
C9orf135-207ENST00000529446 RFC4P35249 363 aa15.01□□□□□ -0.01
C9orf135-207ENST00000529446 PNPLA7Q6ZV29 1317 aa15□□□□□ -0.01
C9orf135-207ENST00000529446 ANXA1P04083 346 aa15□□□□□ -0.01
C9orf135-207ENST00000529446 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
C9orf135-207ENST00000529446 FLIIQ13045 1269 aa15□□□□□ -0.01
C9orf135-207ENST00000529446 COPS6Q7L5N1 327 aa15□□□□□ -0.01
C9orf135-207ENST00000529446 DZIP3Q86Y13 1208 aaKnown RBP15□□□□□ -0.01
C9orf135-207ENST00000529446 XAGE3Q8WTP9 111 aa15□□□□□ -0.01
C9orf135-207ENST00000529446 ARHGEF1Q92888 912 aaKnown RBP15□□□□□ -0.01
C9orf135-207ENST00000529446 NARFQ9UHQ1 456 aa15□□□□□ -0.01
C9orf135-207ENST00000529446 ZNF330Q9Y3S2 320 aaPredicted RBP15□□□□□ -0.01
C9orf135-207ENST00000529446 MAP3K15Q6ZN16 1313 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
C9orf135-207ENST00000529446 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
C9orf135-207ENST00000529446 IPO8O15397 1037 aaKnown RBP14.99□□□□□ -0.01
C9orf135-207ENST00000529446 ZPR1O75312 459 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 PHF14O94880 888 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 SLC16A10Q8TF71 515 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 ARHGAP45Q92619 1136 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
C9orf135-207ENST00000529446 ZNF652Q9Y2D9 606 aa14.99□□□□□ -0.01
C9orf135-207ENST00000529446 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
C9orf135-207ENST00000529446 ANKRD13DQ6ZTN6 518 aa14.98□□□□□ -0.01
C9orf135-207ENST00000529446 PLBD2Q8NHP8 589 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms