RNA–Protein interactions for RNA: ENST00000529276.1

NDUFS3-207, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-207ENST00000529276 PELP1Q8IZL8 1130 aaKnown RBP27.59■■■□□ 2.01
NDUFS3-207ENST00000529276 YY1P25490 414 aa27.58■■■□□ 2.01
NDUFS3-207ENST00000529276 COL15A1P39059 1388 aa27.58■■■□□ 2.01
NDUFS3-207ENST00000529276 ZPR1O75312 459 aa27.56■■■□□ 2
NDUFS3-207ENST00000529276 CANXP27824 592 aaKnown RBP27.56■■■□□ 2
NDUFS3-207ENST00000529276 DLG5Q8TDM6 1919 aa27.55■■■□□ 2
NDUFS3-207ENST00000529276 FKBP8Q14318 412 aa27.55■■■□□ 2
NDUFS3-207ENST00000529276 TAF7Q15545 349 aaPredicted RBP27.55■■■□□ 2
NDUFS3-207ENST00000529276 PARP3Q9Y6F1 533 aa27.54■■■□□ 2
NDUFS3-207ENST00000529276 WDR43Q15061 677 aaKnown RBP eCLIP27.53■■■□□ 2
NDUFS3-207ENST00000529276 USPL1Q5W0Q7 1092 aa27.53■■■□□ 2
NDUFS3-207ENST00000529276 NARFQ9UHQ1 456 aa27.53■■■□□ 2
NDUFS3-207ENST00000529276 YBX3P16989 372 aaKnown RBP eCLIP27.51■■□□□ 1.99
NDUFS3-207ENST00000529276 EIF5P55010 431 aaKnown RBP27.51■■□□□ 1.99
NDUFS3-207ENST00000529276 THUMPD2Q9BTF0 503 aaKnown RBP27.51■■□□□ 1.99
NDUFS3-207ENST00000529276 C10orf71Q711Q0 1435 aa27.5■■□□□ 1.99
NDUFS3-207ENST00000529276 SNRPA1P09661 255 aaKnown RBP27.5■■□□□ 1.99
NDUFS3-207ENST00000529276 PNISRQ8TF01 805 aaKnown RBP27.5■■□□□ 1.99
NDUFS3-207ENST00000529276 MIS18AQ9NYP9 233 aa27.5■■□□□ 1.99
NDUFS3-207ENST00000529276 A0A087WZG4 1122 aa27.49■■□□□ 1.99
NDUFS3-207ENST00000529276 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
NDUFS3-207ENST00000529276 A1BGP04217 495 aa27.49■■□□□ 1.99
NDUFS3-207ENST00000529276 DDR1Q08345 913 aa27.49■■□□□ 1.99
NDUFS3-207ENST00000529276 PRAMEF22A3QJZ6 481 aa27.48■■□□□ 1.99
NDUFS3-207ENST00000529276 IL6STP40189 918 aaPredicted RBP27.48■■□□□ 1.99
NDUFS3-207ENST00000529276 RIPK4P57078 832 aa27.48■■□□□ 1.99
NDUFS3-207ENST00000529276 ZNF330Q9Y3S2 320 aaPredicted RBP27.48■■□□□ 1.99
NDUFS3-207ENST00000529276 USP16Q9Y5T5 823 aa27.48■■□□□ 1.99
NDUFS3-207ENST00000529276 GRIN3BO60391 1043 aa27.47■■□□□ 1.99
NDUFS3-207ENST00000529276 CCDC146Q8IYE0 955 aa27.47■■□□□ 1.99
NDUFS3-207ENST00000529276 KIF13BQ9NQT8 1826 aa27.46■■□□□ 1.99
NDUFS3-207ENST00000529276 TM4SF1P30408 202 aa27.46■■□□□ 1.99
NDUFS3-207ENST00000529276 TMPOP42166 694 aaKnown RBP27.46■■□□□ 1.99
NDUFS3-207ENST00000529276 BCL2L12Q9HB09 334 aa27.46■■□□□ 1.99
NDUFS3-207ENST00000529276 PXDNLA1KZ92 1463 aa27.45■■□□□ 1.99
NDUFS3-207ENST00000529276 POLRMTO00411 1230 aaKnown RBP27.45■■□□□ 1.98
NDUFS3-207ENST00000529276 TGFB2P61812 414 aa27.45■■□□□ 1.98
NDUFS3-207ENST00000529276 NPM2Q86SE8 214 aaKnown RBP27.45■■□□□ 1.98
NDUFS3-207ENST00000529276 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.98
NDUFS3-207ENST00000529276 LMOD3Q0VAK6 560 aa27.44■■□□□ 1.98
NDUFS3-207ENST00000529276 NFIXQ14938 502 aa27.44■■□□□ 1.98
NDUFS3-207ENST00000529276 RUNDC1Q96C34 613 aa27.44■■□□□ 1.98
NDUFS3-207ENST00000529276 WWC3Q9ULE0 1092 aa27.44■■□□□ 1.98
NDUFS3-207ENST00000529276 KDM3BQ7LBC6 1761 aa27.43■■□□□ 1.98
NDUFS3-207ENST00000529276 RRP7AQ9Y3A4 280 aaKnown RBP27.43■■□□□ 1.98
NDUFS3-207ENST00000529276 CHD4Q14839 1912 aa27.43■■□□□ 1.98
NDUFS3-207ENST00000529276 TBC1D2BQ9UPU7 963 aa27.42■■□□□ 1.98
NDUFS3-207ENST00000529276 PIP4K2AP48426 406 aaPredicted RBP27.41■■□□□ 1.98
NDUFS3-207ENST00000529276 UTRNP46939 3433 aa27.4■■□□□ 1.98
NDUFS3-207ENST00000529276 EIF4A1P60842 406 aaKnown RBP27.4■■□□□ 1.98
NDUFS3-207ENST00000529276 KIAA1551Q9HCM1 1747 aa27.4■■□□□ 1.98
NDUFS3-207ENST00000529276 A0A0G2JLW4 131 aa27.39■■□□□ 1.98
NDUFS3-207ENST00000529276 NEUROD2Q15784 382 aa27.39■■□□□ 1.98
NDUFS3-207ENST00000529276 SCN7AQ01118 1682 aa27.39■■□□□ 1.97
NDUFS3-207ENST00000529276 DPEP1P16444 411 aa27.38■■□□□ 1.97
NDUFS3-207ENST00000529276 TSPYL4Q9UJ04 414 aa27.38■■□□□ 1.97
NDUFS3-207ENST00000529276 GIGYF1O75420 1035 aaPredicted RBP27.37■■□□□ 1.97
NDUFS3-207ENST00000529276 CAMTA2O94983 1202 aa27.37■■□□□ 1.97
NDUFS3-207ENST00000529276 BICDL1Q6ZP65 573 aa27.37■■□□□ 1.97
NDUFS3-207ENST00000529276 DZIP3Q86Y13 1208 aaKnown RBP27.37■■□□□ 1.97
NDUFS3-207ENST00000529276 N4BP2Q86UW6 1770 aaPredicted RBP27.37■■□□□ 1.97
NDUFS3-207ENST00000529276 LAMB4A4D0S4 1761 aa27.36■■□□□ 1.97
NDUFS3-207ENST00000529276 NBPF26B4DH59 902 aa27.36■■□□□ 1.97
NDUFS3-207ENST00000529276 SERPINB2P05120 415 aa27.36■■□□□ 1.97
NDUFS3-207ENST00000529276 NBPF10Q6P3W6 841 aaKnown RBP27.36■■□□□ 1.97
NDUFS3-207ENST00000529276 NBPF15Q8N660 670 aa27.36■■□□□ 1.97
NDUFS3-207ENST00000529276 TBC1D9BQ66K14 1250 aa27.35■■□□□ 1.97
NDUFS3-207ENST00000529276 GOLGB1Q14789 3259 aaKnown RBP27.34■■□□□ 1.97
NDUFS3-207ENST00000529276 BABAM1Q9NWV8 329 aa27.34■■□□□ 1.97
NDUFS3-207ENST00000529276 TRIM35Q9UPQ4 493 aa27.33■■□□□ 1.97
NDUFS3-207ENST00000529276 NRXN2Q9P2S2 1712 aa27.33■■□□□ 1.96
NDUFS3-207ENST00000529276 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
NDUFS3-207ENST00000529276 BCS1LQ9Y276 419 aa27.32■■□□□ 1.96
NDUFS3-207ENST00000529276 BCORQ6W2J9 1755 aa27.31■■□□□ 1.96
NDUFS3-207ENST00000529276 KCNA3P22001 575 aa27.31■■□□□ 1.96
NDUFS3-207ENST00000529276 ZNF784Q8NCA9 323 aaPredicted RBP27.31■■□□□ 1.96
NDUFS3-207ENST00000529276 CARMIL3Q8ND23 1372 aa27.31■■□□□ 1.96
NDUFS3-207ENST00000529276 ANP32CO43423 234 aa27.3■■□□□ 1.96
NDUFS3-207ENST00000529276 CHRNA5P30532 468 aa27.3■■□□□ 1.96
NDUFS3-207ENST00000529276 CCDC184Q52MB2 194 aa27.3■■□□□ 1.96
NDUFS3-207ENST00000529276 PIM2Q9P1W9 311 aa27.29■■□□□ 1.96
NDUFS3-207ENST00000529276 ZNF652Q9Y2D9 606 aa27.29■■□□□ 1.96
NDUFS3-207ENST00000529276 CLEC4GQ6UXB4 293 aa27.28■■□□□ 1.96
NDUFS3-207ENST00000529276 SETDB2Q96T68 719 aa27.28■■□□□ 1.96
NDUFS3-207ENST00000529276 BRCA1P38398 1863 aaKnown RBP27.27■■□□□ 1.96
NDUFS3-207ENST00000529276 APAF1O14727 1248 aa27.27■■□□□ 1.96
NDUFS3-207ENST00000529276 LAS1LQ9Y4W2 734 aaKnown RBP27.26■■□□□ 1.95
NDUFS3-207ENST00000529276 CHL1O00533 1208 aa27.25■■□□□ 1.95
NDUFS3-207ENST00000529276 RGL2O15211 777 aa27.25■■□□□ 1.95
NDUFS3-207ENST00000529276 ERBB4Q15303 1308 aa27.24■■□□□ 1.95
NDUFS3-207ENST00000529276 DALRD3Q5D0E6 543 aaKnown RBP27.24■■□□□ 1.95
NDUFS3-207ENST00000529276 PRR5LQ6MZQ0 368 aa27.24■■□□□ 1.95
NDUFS3-207ENST00000529276 NGEFQ8N5V2 710 aa27.24■■□□□ 1.95
NDUFS3-207ENST00000529276 MYL6BP14649 208 aa27.23■■□□□ 1.95
NDUFS3-207ENST00000529276 CNBD1Q8NA66 436 aa27.23■■□□□ 1.95
NDUFS3-207ENST00000529276 NPHP1O15259 732 aa27.22■■□□□ 1.95
NDUFS3-207ENST00000529276 EIF2S2P20042 333 aaKnown RBP27.22■■□□□ 1.95
NDUFS3-207ENST00000529276 C2CD5Q86YS7 1000 aa27.21■■□□□ 1.95
NDUFS3-207ENST00000529276 MRS2Q9HD23 443 aa27.21■■□□□ 1.95
NDUFS3-207ENST00000529276 KIF6Q6ZMV9 814 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms