RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
NUP98-215ENST00000529063 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
NUP98-215ENST00000529063 WASHC2AQ641Q2 1341 aa8.37□□□□□ -1.07
NUP98-215ENST00000529063 PHKG2P15735 406 aa8.37□□□□□ -1.07
NUP98-215ENST00000529063 ZNF526Q8TF50 670 aaPredicted RBP8.37□□□□□ -1.07
NUP98-215ENST00000529063 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
NUP98-215ENST00000529063 EYA1Q99502 592 aa8.37□□□□□ -1.07
NUP98-215ENST00000529063 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
NUP98-215ENST00000529063 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
NUP98-215ENST00000529063 KIF3CO14782 793 aa8.36□□□□□ -1.07
NUP98-215ENST00000529063 GNPATO15228 680 aa8.36□□□□□ -1.07
NUP98-215ENST00000529063 HSPA6P17066 643 aa8.36□□□□□ -1.07
NUP98-215ENST00000529063 ATG3Q9NT62 314 aa8.36□□□□□ -1.07
NUP98-215ENST00000529063 PLEKHG2Q9H7P9 1386 aa8.35□□□□□ -1.07
NUP98-215ENST00000529063 EIF4A2Q14240 407 aaKnown RBP8.35□□□□□ -1.07
NUP98-215ENST00000529063 EFCAB3Q8N7B9 438 aa8.35□□□□□ -1.07
NUP98-215ENST00000529063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.35□□□□□ -1.07
NUP98-215ENST00000529063 TMOD3Q9NYL9 352 aa8.35□□□□□ -1.07
NUP98-215ENST00000529063 POLKQ9UBT6 870 aa8.35□□□□□ -1.07
NUP98-215ENST00000529063 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
NUP98-215ENST00000529063 VIRMAQ69YN4 1812 aaKnown RBP8.35□□□□□ -1.07
NUP98-215ENST00000529063 SCN11AQ9UI33 1791 aa8.35□□□□□ -1.07
NUP98-215ENST00000529063 WDR90Q96KV7 1748 aa8.34□□□□□ -1.07
NUP98-215ENST00000529063 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
NUP98-215ENST00000529063 SEMA3EO15041 775 aa8.34□□□□□ -1.07
NUP98-215ENST00000529063 PPM1GO15355 546 aaPredicted RBP8.34□□□□□ -1.07
NUP98-215ENST00000529063 MMP10P09238 476 aa8.34□□□□□ -1.07
NUP98-215ENST00000529063 ATP6V1AP38606 617 aa8.34□□□□□ -1.07
NUP98-215ENST00000529063 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
NUP98-215ENST00000529063 SBF1O95248 1867 aa8.33□□□□□ -1.08
NUP98-215ENST00000529063 HMGB2P26583 209 aaKnown RBP8.33□□□□□ -1.08
NUP98-215ENST00000529063 NEUROD2Q15784 382 aa8.33□□□□□ -1.08
NUP98-215ENST00000529063 CDCA8Q53HL2 280 aa8.33□□□□□ -1.08
NUP98-215ENST00000529063 IFNL1Q8IU54 200 aa8.33□□□□□ -1.08
NUP98-215ENST00000529063 IFNL2Q8IZJ0 200 aa8.33□□□□□ -1.08
NUP98-215ENST00000529063 CNTNAP4Q9C0A0 1308 aa8.32□□□□□ -1.08
NUP98-215ENST00000529063 AFDNP55196 1824 aaKnown RBP8.32□□□□□ -1.08
NUP98-215ENST00000529063 GYS1P13807 737 aa8.32□□□□□ -1.08
NUP98-215ENST00000529063 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
NUP98-215ENST00000529063 DLEC1Q9Y238 1755 aa8.32□□□□□ -1.08
NUP98-215ENST00000529063 NRXN2Q9P2S2 1712 aa8.32□□□□□ -1.08
NUP98-215ENST00000529063 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
NUP98-215ENST00000529063 PRKAR2AP13861 404 aaKnown RBP8.31□□□□□ -1.08
NUP98-215ENST00000529063 TNRC6CQ9HCJ0 1690 aaKnown RBP8.3□□□□□ -1.08
NUP98-215ENST00000529063 ERVV-2B6SEH9 535 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 DPEP1P16444 411 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 KCNA3P22001 575 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 TNNT2P45379 298 aaPredicted RBP8.3□□□□□ -1.08
NUP98-215ENST00000529063 TGFB2P61812 414 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
NUP98-215ENST00000529063 AEBP1Q8IUX7 1158 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 BCS1LQ9Y276 419 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
NUP98-215ENST00000529063 MRC1P22897 1456 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 UBR2Q8IWV8 1755 aa8.3□□□□□ -1.08
NUP98-215ENST00000529063 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 RPS6KA4O75676 772 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 DDR1Q08345 913 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 SMYD5Q6GMV2 418 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 NLGN1Q8N2Q7 840 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 DNAJC5GQ8N7S2 189 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 DCAF5Q96JK2 942 aa8.29□□□□□ -1.08
NUP98-215ENST00000529063 SRP68Q9UHB9 627 aaKnown RBP8.29□□□□□ -1.08
NUP98-215ENST00000529063 MAP3K13O43283 966 aa8.28□□□□□ -1.08
NUP98-215ENST00000529063 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
NUP98-215ENST00000529063 LARP6Q9BRS8 491 aaKnown RBP8.28□□□□□ -1.08
NUP98-215ENST00000529063 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
NUP98-215ENST00000529063 USP42Q9H9J4 1324 aaKnown RBP8.28□□□□□ -1.08
NUP98-215ENST00000529063 COL11A2P13942 1736 aaPredicted RBP8.27□□□□□ -1.09
NUP98-215ENST00000529063 TOMM70O94826 608 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 FCHSD2O94868 740 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 PDE4AP27815 886 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
NUP98-215ENST00000529063 APLP1P51693 650 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 ARHGAP27Q6ZUM4 889 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 CCDC88AQ3V6T2 1871 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 ANKRD31Q8N7Z5 1873 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 PCNTO95613 3336 aa8.27□□□□□ -1.09
NUP98-215ENST00000529063 SIPA1L3O60292 1781 aaPredicted RBP8.26□□□□□ -1.09
NUP98-215ENST00000529063 PTCD1O75127 700 aaKnown RBP8.26□□□□□ -1.09
NUP98-215ENST00000529063 HSP90AB1P08238 724 aaKnown RBP8.26□□□□□ -1.09
NUP98-215ENST00000529063 RFC4P35249 363 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 CABP4P57796 275 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 HTRA3P83110 453 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 PLEKHO1Q53GL0 409 aaPredicted RBP8.26□□□□□ -1.09
NUP98-215ENST00000529063 C9orf131Q5VYM1 1079 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 INTS5Q6P9B9 1019 aaKnown RBP8.26□□□□□ -1.09
NUP98-215ENST00000529063 KIF12Q96FN5 646 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 PARP3Q9Y6F1 533 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 SCN7AQ01118 1682 aa8.26□□□□□ -1.09
NUP98-215ENST00000529063 POLRMTO00411 1230 aaKnown RBP8.25□□□□□ -1.09
NUP98-215ENST00000529063 ZMYND10O75800 440 aa8.25□□□□□ -1.09
NUP98-215ENST00000529063 CHRNA5P30532 468 aa8.25□□□□□ -1.09
NUP98-215ENST00000529063 PRELPP51888 382 aa8.25□□□□□ -1.09
NUP98-215ENST00000529063 AMOTQ4VCS5 1084 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms