RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 MEIS3Q99687 375 aa10.33□□□□□ -0.76
AMBRA1-206ENST00000528950 SYNMO15061 1565 aa10.33□□□□□ -0.76
AMBRA1-206ENST00000528950 SHANK2Q9UPX8 1470 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 STX6O43752 255 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 CEBPZQ03701 1054 aaKnown RBP10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 CEP135Q66GS9 1140 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 ERCC4Q92889 916 aaPredicted RBP10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 PHF23Q9BUL5 403 aaPredicted RBP10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 PDCP20941 246 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 KIAA1524Q8TCG1 905 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 GTF3C6Q969F1 213 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 CLIP2Q9UDT6 1046 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 F6X3S4 739 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 USP8P40818 1118 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 KRT85P78386 507 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 KRT24Q2M2I5 525 aa10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 RPAP2Q8IXW5 612 aaPredicted RBP10.32□□□□□ -0.76
AMBRA1-206ENST00000528950 ZSCAN22P10073 491 aaPredicted RBP10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 NCBP1Q09161 790 aaKnown RBP10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 DUOX2Q9NRD8 1548 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 SMTNL1A8MU46 457 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 SLC4A2P04920 1241 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 CPA1P15085 419 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 PDE1AP54750 535 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 NFE2L2Q16236 605 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 FBXO31Q5XUX0 539 aaPredicted RBP10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 IL16Q14005 1332 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 CCP110O43303 1012 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 GABPB1Q06547 395 aaPredicted RBP10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 NRBP1Q9UHY1 535 aa10.31□□□□□ -0.76
AMBRA1-206ENST00000528950 BMS1Q14692 1282 aaKnown RBP10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 INO80Q9ULG1 1556 aaPredicted RBP10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 GTF2A1P52655 376 aaPredicted RBP10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 ANO6Q4KMQ2 910 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 ANKRD44Q8N8A2 993 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 RASSF8Q8NHQ8 419 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 FCHSD2O94868 740 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 ELF2Q15723 593 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 FAM173BQ6P4H8 233 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 SYTL4Q96C24 671 aaPredicted RBP10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 LRRCC1Q9C099 1032 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
AMBRA1-206ENST00000528950 CASTP20810 708 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 SYT1P21579 422 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 LARP1BQ659C4 914 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 CEP85Q6P2H3 762 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 GJB2P29033 226 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 STK3Q13188 491 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
AMBRA1-206ENST00000528950 ERLIN1O75477 346 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 URI1O94763 535 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 ARHGAP45Q92619 1136 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 KCNF1Q9H3M0 494 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 TMX1Q9H3N1 280 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 KIF2AO00139 706 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 TULP2O00295 520 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 F13A1P00488 732 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 TYRO3Q06418 890 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 ZNF397Q8NF99 534 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 SPG7Q9UQ90 795 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 CCDC9Q9Y3X0 531 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 PLXNC1O60486 1568 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 CPLX1O14810 134 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 KIAA0754O94854 1291 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 ST7Q9NRC1 585 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 SPTLC3Q9NUV7 552 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 ZNF215Q9UL58 517 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 PTPRTO14522 1441 aa10.28□□□□□ -0.76
AMBRA1-206ENST00000528950 ZNF165P49910 485 aa10.27□□□□□ -0.76
AMBRA1-206ENST00000528950 CDR1P51861 262 aa10.27□□□□□ -0.76
AMBRA1-206ENST00000528950 CHMP4CQ96CF2 233 aa10.27□□□□□ -0.76
AMBRA1-206ENST00000528950 JAKMIP1Q96N16 626 aaKnown RBP10.27□□□□□ -0.76
AMBRA1-206ENST00000528950 IFIT2P09913 472 aaKnown RBP10.27□□□□□ -0.77
AMBRA1-206ENST00000528950 INTS4Q96HW7 963 aaKnown RBP10.27□□□□□ -0.77
AMBRA1-206ENST00000528950 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
AMBRA1-206ENST00000528950 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.77
AMBRA1-206ENST00000528950 DACT1Q9NYF0 836 aa10.27□□□□□ -0.77
AMBRA1-206ENST00000528950 A0A0G2JS52 829 aa10.27□□□□□ -0.77
AMBRA1-206ENST00000528950 SERPINC1P01008 464 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms