RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
CMTM1-210ENST00000528441 MCM10Q7L590 875 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 NLGN2Q8NFZ4 835 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 MRC1P22897 1456 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 TJP1Q07157 1748 aa12□□□□□ -0.49
CMTM1-210ENST00000528441 NLGN1Q8N2Q7 840 aa12□□□□□ -0.49
CMTM1-210ENST00000528441 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
CMTM1-210ENST00000528441 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
CMTM1-210ENST00000528441 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
CMTM1-210ENST00000528441 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
CMTM1-210ENST00000528441 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
CMTM1-210ENST00000528441 NPHP1O15259 732 aa11.99□□□□□ -0.49
CMTM1-210ENST00000528441 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
CMTM1-210ENST00000528441 ZNF790Q6PG37 636 aa11.99□□□□□ -0.49
CMTM1-210ENST00000528441 IL17REQ8NFR9 667 aa11.99□□□□□ -0.49
CMTM1-210ENST00000528441 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
CMTM1-210ENST00000528441 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
CMTM1-210ENST00000528441 COL15A1P39059 1388 aa11.97□□□□□ -0.49
CMTM1-210ENST00000528441 ZNF496Q96IT1 587 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-210ENST00000528441 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-210ENST00000528441 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
CMTM1-210ENST00000528441 CD2APQ9Y5K6 639 aa11.97□□□□□ -0.49
CMTM1-210ENST00000528441 MYH14Q7Z406 1995 aaKnown RBP11.97□□□□□ -0.49
CMTM1-210ENST00000528441 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
CMTM1-210ENST00000528441 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-210ENST00000528441 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 HEG1Q9ULI3 1381 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 CYP19A1P11511 503 aaPredicted RBP11.96□□□□□ -0.49
CMTM1-210ENST00000528441 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
CMTM1-210ENST00000528441 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
CMTM1-210ENST00000528441 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
CMTM1-210ENST00000528441 A0A087WZG4 1122 aa11.95□□□□□ -0.5
CMTM1-210ENST00000528441 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
CMTM1-210ENST00000528441 GYS1P13807 737 aa11.95□□□□□ -0.5
CMTM1-210ENST00000528441 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
CMTM1-210ENST00000528441 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
CMTM1-210ENST00000528441 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
CMTM1-210ENST00000528441 CHD4Q14839 1912 aa11.94□□□□□ -0.5
CMTM1-210ENST00000528441 DLG5Q8TDM6 1919 aa11.94□□□□□ -0.5
CMTM1-210ENST00000528441 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-210ENST00000528441 KCNQ3O43525 872 aa11.94□□□□□ -0.5
CMTM1-210ENST00000528441 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
CMTM1-210ENST00000528441 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
CMTM1-210ENST00000528441 TAF7Q15545 349 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-210ENST00000528441 PNISRQ8TF01 805 aaKnown RBP11.94□□□□□ -0.5
CMTM1-210ENST00000528441 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-210ENST00000528441 RIPK4P57078 832 aa11.93□□□□□ -0.5
CMTM1-210ENST00000528441 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CMTM1-210ENST00000528441 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
CMTM1-210ENST00000528441 MIS18AQ9NYP9 233 aa11.93□□□□□ -0.5
CMTM1-210ENST00000528441 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
CMTM1-210ENST00000528441 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
CMTM1-210ENST00000528441 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CMTM1-210ENST00000528441 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
CMTM1-210ENST00000528441 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-210ENST00000528441 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
CMTM1-210ENST00000528441 PIP4K2AP48426 406 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-210ENST00000528441 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
CMTM1-210ENST00000528441 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
CMTM1-210ENST00000528441 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
CMTM1-210ENST00000528441 TSPYL4Q9UJ04 414 aa11.92□□□□□ -0.5
CMTM1-210ENST00000528441 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
CMTM1-210ENST00000528441 ANP32CO43423 234 aa11.91□□□□□ -0.5
CMTM1-210ENST00000528441 A1BGP04217 495 aa11.91□□□□□ -0.5
CMTM1-210ENST00000528441 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
CMTM1-210ENST00000528441 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-210ENST00000528441 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-210ENST00000528441 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
CMTM1-210ENST00000528441 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-210ENST00000528441 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
CMTM1-210ENST00000528441 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
CMTM1-210ENST00000528441 TGFB2P61812 414 aa11.89□□□□□ -0.51
CMTM1-210ENST00000528441 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
CMTM1-210ENST00000528441 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
CMTM1-210ENST00000528441 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
CMTM1-210ENST00000528441 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
CMTM1-210ENST00000528441 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
CMTM1-210ENST00000528441 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
CMTM1-210ENST00000528441 SERPINB2P05120 415 aa11.88□□□□□ -0.51
CMTM1-210ENST00000528441 DPEP1P16444 411 aa11.88□□□□□ -0.51
CMTM1-210ENST00000528441 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
CMTM1-210ENST00000528441 DDR1Q08345 913 aa11.88□□□□□ -0.51
CMTM1-210ENST00000528441 NFIXQ14938 502 aa11.88□□□□□ -0.51
CMTM1-210ENST00000528441 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
CMTM1-210ENST00000528441 MYL6BP14649 208 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 EIF2S2P20042 333 aaKnown RBP11.87□□□□□ -0.51
CMTM1-210ENST00000528441 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-210ENST00000528441 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
CMTM1-210ENST00000528441 ST5P78524 1137 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms