RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 USP42Q9H9J4 1324 aaKnown RBP25.63■■□□□ 1.69
CAPN1-211ENST00000527739 USPL1Q5W0Q7 1092 aa25.62■■□□□ 1.69
CAPN1-211ENST00000527739 MYH14Q7Z406 1995 aaKnown RBP25.62■■□□□ 1.69
CAPN1-211ENST00000527739 A0A0G2JLW4 131 aa25.61■■□□□ 1.69
CAPN1-211ENST00000527739 DCTN1Q14203 1278 aa25.61■■□□□ 1.69
CAPN1-211ENST00000527739 FMNL2Q96PY5 1086 aa25.61■■□□□ 1.69
CAPN1-211ENST00000527739 C10orf71Q711Q0 1435 aa25.61■■□□□ 1.69
CAPN1-211ENST00000527739 SOS1Q07889 1333 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-211ENST00000527739 KCPQ6ZWJ8 1503 aa25.6■■□□□ 1.69
CAPN1-211ENST00000527739 ZNF330Q9Y3S2 320 aaPredicted RBP25.6■■□□□ 1.69
CAPN1-211ENST00000527739 KCNQ3O43525 872 aa25.59■■□□□ 1.69
CAPN1-211ENST00000527739 RALBP1Q15311 655 aa25.59■■□□□ 1.69
CAPN1-211ENST00000527739 TEX13AQ9BXU3 409 aaPredicted RBP25.59■■□□□ 1.69
CAPN1-211ENST00000527739 C4AP0C0L4 1744 aa25.59■■□□□ 1.69
CAPN1-211ENST00000527739 TJP1Q07157 1748 aa25.59■■□□□ 1.69
CAPN1-211ENST00000527739 CEMIPQ8WUJ3 1361 aa25.58■■□□□ 1.69
CAPN1-211ENST00000527739 HEG1Q9ULI3 1381 aa25.57■■□□□ 1.68
CAPN1-211ENST00000527739 TGFB2P61812 414 aa25.57■■□□□ 1.68
CAPN1-211ENST00000527739 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
CAPN1-211ENST00000527739 ADAMTS7Q9UKP4 1686 aa25.57■■□□□ 1.68
CAPN1-211ENST00000527739 DPEP1P16444 411 aa25.56■■□□□ 1.68
CAPN1-211ENST00000527739 NARFQ9UHQ1 456 aa25.56■■□□□ 1.68
CAPN1-211ENST00000527739 COL15A1P39059 1388 aa25.56■■□□□ 1.68
CAPN1-211ENST00000527739 KIF3CO14782 793 aa25.55■■□□□ 1.68
CAPN1-211ENST00000527739 HTATSF1O43719 755 aaKnown RBP25.55■■□□□ 1.68
CAPN1-211ENST00000527739 DDR1Q08345 913 aa25.55■■□□□ 1.68
CAPN1-211ENST00000527739 NPM2Q86SE8 214 aaKnown RBP25.55■■□□□ 1.68
CAPN1-211ENST00000527739 PNNQ9H307 717 aaKnown RBP25.55■■□□□ 1.68
CAPN1-211ENST00000527739 A0A087WZG4 1122 aa25.53■■□□□ 1.68
CAPN1-211ENST00000527739 HSPA6P17066 643 aa25.53■■□□□ 1.68
CAPN1-211ENST00000527739 MAPK8IP3Q9UPT6 1336 aa25.53■■□□□ 1.68
CAPN1-211ENST00000527739 A1BGP04217 495 aa25.52■■□□□ 1.68
CAPN1-211ENST00000527739 TM4SF1P30408 202 aa25.52■■□□□ 1.68
CAPN1-211ENST00000527739 POLRMTO00411 1230 aaKnown RBP25.51■■□□□ 1.67
CAPN1-211ENST00000527739 KCNA3P22001 575 aa25.51■■□□□ 1.67
CAPN1-211ENST00000527739 EIF5P55010 431 aaKnown RBP25.51■■□□□ 1.67
CAPN1-211ENST00000527739 TAF7Q15545 349 aaPredicted RBP25.51■■□□□ 1.67
CAPN1-211ENST00000527739 BICDL1Q6ZP65 573 aa25.51■■□□□ 1.67
CAPN1-211ENST00000527739 PLEKHF1Q96S99 279 aa25.51■■□□□ 1.67
CAPN1-211ENST00000527739 MIS18AQ9NYP9 233 aa25.51■■□□□ 1.67
CAPN1-211ENST00000527739 BRCA1P38398 1863 aaKnown RBP25.51■■□□□ 1.67
CAPN1-211ENST00000527739 NFIXQ14938 502 aa25.5■■□□□ 1.67
CAPN1-211ENST00000527739 VIRMAQ69YN4 1812 aaKnown RBP25.5■■□□□ 1.67
CAPN1-211ENST00000527739 ARHGAP27Q6ZUM4 889 aa25.5■■□□□ 1.67
CAPN1-211ENST00000527739 TBC1D2BQ9UPU7 963 aa25.5■■□□□ 1.67
CAPN1-211ENST00000527739 USP16Q9Y5T5 823 aa25.5■■□□□ 1.67
CAPN1-211ENST00000527739 NFE2L2Q16236 605 aa25.49■■□□□ 1.67
CAPN1-211ENST00000527739 PRAMEF22A3QJZ6 481 aa25.48■■□□□ 1.67
CAPN1-211ENST00000527739 SNRPA1P09661 255 aaKnown RBP25.48■■□□□ 1.67
CAPN1-211ENST00000527739 BCL2L12Q9HB09 334 aa25.48■■□□□ 1.67
CAPN1-211ENST00000527739 MYBBP1AQ9BQG0 1328 aaKnown RBP25.47■■□□□ 1.67
CAPN1-211ENST00000527739 IL6STP40189 918 aaPredicted RBP25.47■■□□□ 1.67
CAPN1-211ENST00000527739 PIP4K2AP48426 406 aaPredicted RBP25.47■■□□□ 1.67
CAPN1-211ENST00000527739 SERPINB2P05120 415 aa25.46■■□□□ 1.67
CAPN1-211ENST00000527739 THUMPD2Q9BTF0 503 aaKnown RBP25.45■■□□□ 1.66
CAPN1-211ENST00000527739 PIM2Q9P1W9 311 aa25.45■■□□□ 1.66
CAPN1-211ENST00000527739 UBR2Q8IWV8 1755 aa25.44■■□□□ 1.66
CAPN1-211ENST00000527739 CHRNA5P30532 468 aa25.44■■□□□ 1.66
CAPN1-211ENST00000527739 PNISRQ8TF01 805 aaKnown RBP25.44■■□□□ 1.66
CAPN1-211ENST00000527739 TBC1D9BQ66K14 1250 aa25.42■■□□□ 1.66
CAPN1-211ENST00000527739 NMRK2Q9NPI5 230 aa25.42■■□□□ 1.66
CAPN1-211ENST00000527739 ARFGEF1Q9Y6D6 1849 aa25.42■■□□□ 1.66
CAPN1-211ENST00000527739 RIPK4P57078 832 aa25.41■■□□□ 1.66
CAPN1-211ENST00000527739 DALRD3Q5D0E6 543 aaKnown RBP25.41■■□□□ 1.66
CAPN1-211ENST00000527739 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
CAPN1-211ENST00000527739 DZIP3Q86Y13 1208 aaKnown RBP25.41■■□□□ 1.66
CAPN1-211ENST00000527739 SIPA1L3O60292 1781 aaPredicted RBP25.41■■□□□ 1.66
CAPN1-211ENST00000527739 WDR43Q15061 677 aaKnown RBP eCLIP25.4■■□□□ 1.66
CAPN1-211ENST00000527739 NPHP1O15259 732 aa25.39■■□□□ 1.66
CAPN1-211ENST00000527739 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
CAPN1-211ENST00000527739 IFFO2Q5TF58 517 aa25.39■■□□□ 1.66
CAPN1-211ENST00000527739 CCDC146Q8IYE0 955 aa25.39■■□□□ 1.66
CAPN1-211ENST00000527739 CAMTA2O94983 1202 aa25.38■■□□□ 1.65
CAPN1-211ENST00000527739 TOMM70O94826 608 aa25.37■■□□□ 1.65
CAPN1-211ENST00000527739 NEUROD2Q15784 382 aa25.37■■□□□ 1.65
CAPN1-211ENST00000527739 SETDB2Q96T68 719 aa25.37■■□□□ 1.65
CAPN1-211ENST00000527739 RRP7AQ9Y3A4 280 aaKnown RBP25.37■■□□□ 1.65
CAPN1-211ENST00000527739 CCDC24Q8N4L8 307 aa25.36■■□□□ 1.65
CAPN1-211ENST00000527739 TMPOP42166 694 aaKnown RBP25.35■■□□□ 1.65
CAPN1-211ENST00000527739 C2CD5Q86YS7 1000 aa25.35■■□□□ 1.65
CAPN1-211ENST00000527739 NGEFQ8N5V2 710 aa25.35■■□□□ 1.65
CAPN1-211ENST00000527739 PRKRIP1Q9H875 184 aaPredicted RBP25.35■■□□□ 1.65
CAPN1-211ENST00000527739 NBPF26B4DH59 902 aa25.34■■□□□ 1.65
CAPN1-211ENST00000527739 EIF4A1P60842 406 aaKnown RBP25.34■■□□□ 1.65
CAPN1-211ENST00000527739 NBPF10Q6P3W6 841 aaKnown RBP25.34■■□□□ 1.65
CAPN1-211ENST00000527739 NBPF15Q8N660 670 aa25.34■■□□□ 1.65
CAPN1-211ENST00000527739 TSPYL4Q9UJ04 414 aa25.34■■□□□ 1.65
CAPN1-211ENST00000527739 AFDNP55196 1824 aaKnown RBP25.33■■□□□ 1.65
CAPN1-211ENST00000527739 H0YIN7 160 aa25.33■■□□□ 1.65
CAPN1-211ENST00000527739 LMOD3Q0VAK6 560 aa25.33■■□□□ 1.65
CAPN1-211ENST00000527739 RNF181Q9P0P0 153 aa25.32■■□□□ 1.64
CAPN1-211ENST00000527739 ZNF652Q9Y2D9 606 aa25.32■■□□□ 1.64
CAPN1-211ENST00000527739 CARMIL3Q8ND23 1372 aa25.31■■□□□ 1.64
CAPN1-211ENST00000527739 APLP1P51693 650 aa25.31■■□□□ 1.64
CAPN1-211ENST00000527739 PRR5LQ6MZQ0 368 aa25.31■■□□□ 1.64
CAPN1-211ENST00000527739 RUNDC1Q96C34 613 aa25.31■■□□□ 1.64
CAPN1-211ENST00000527739 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
CAPN1-211ENST00000527739 NRXN2Q9P2S2 1712 aa25.3■■□□□ 1.64
CAPN1-211ENST00000527739 CNBD1Q8NA66 436 aa25.3■■□□□ 1.64
CAPN1-211ENST00000527739 ZNF622Q969S3 477 aaKnown RBP eCLIP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms