RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 PGBD3Q8N328 593 aa15.46■□□□□ 0.07
CTNND1-217ENST00000527599 TSPAN10Q9H1Z9 355 aaPredicted RBP15.46■□□□□ 0.07
CTNND1-217ENST00000527599 ADAMTS2O95450 1211 aa15.45■□□□□ 0.06
CTNND1-217ENST00000527599 TXLNAP40222 546 aa15.45■□□□□ 0.06
CTNND1-217ENST00000527599 TEAD4Q15561 434 aa15.45■□□□□ 0.06
CTNND1-217ENST00000527599 SH3PXD2AQ5TCZ1 1133 aa15.45■□□□□ 0.06
CTNND1-217ENST00000527599 VRTNQ9H8Y1 702 aa15.45■□□□□ 0.06
CTNND1-217ENST00000527599 SRSF11Q05519 484 aaKnown RBP15.44■□□□□ 0.06
CTNND1-217ENST00000527599 LBRQ14739 615 aaKnown RBP15.44■□□□□ 0.06
CTNND1-217ENST00000527599 ZNF385CQ66K41 422 aaPredicted RBP15.44■□□□□ 0.06
CTNND1-217ENST00000527599 C1orf216Q8TAB5 229 aa15.44■□□□□ 0.06
CTNND1-217ENST00000527599 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
CTNND1-217ENST00000527599 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
CTNND1-217ENST00000527599 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
CTNND1-217ENST00000527599 NOS2P35228 1153 aa15.43■□□□□ 0.06
CTNND1-217ENST00000527599 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L15C9J2P7 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L10C9JJH3 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L13C9JLJ4 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L12C9JPN9 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L11C9JVI0 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L21D6R901 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L18D6R9N7 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L22D6RA61 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L17D6RBQ6 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L19D6RCP7 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L20D6RJB6 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 USP17L24Q0WX57 530 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 DPYDQ12882 1025 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 NDFIP2Q9NV92 336 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 ZDHHC3Q9NYG2 299 aa15.42■□□□□ 0.06
CTNND1-217ENST00000527599 FAM196BA6NMK8 535 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 C21orf2O43822 256 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 SEC13P55735 322 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 CDCA8Q53HL2 280 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 EFHC2Q5JST6 749 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 ZIC5Q96T25 663 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 CFHR5Q9BXR6 569 aa15.41■□□□□ 0.06
CTNND1-217ENST00000527599 IGF1RP08069 1367 aa15.4■□□□□ 0.06
CTNND1-217ENST00000527599 A0A1W2PNR3 127 aa15.4■□□□□ 0.06
CTNND1-217ENST00000527599 RFX1P22670 979 aa15.4■□□□□ 0.06
CTNND1-217ENST00000527599 C7orf43Q8WVR3 580 aa15.4■□□□□ 0.06
CTNND1-217ENST00000527599 ARXQ96QS3 562 aa15.4■□□□□ 0.06
CTNND1-217ENST00000527599 HCN2Q9UL51 889 aa15.4■□□□□ 0.06
CTNND1-217ENST00000527599 EML1O00423 815 aa15.39■□□□□ 0.05
CTNND1-217ENST00000527599 BNIP3LO60238 219 aa15.39■□□□□ 0.05
CTNND1-217ENST00000527599 LYPD4Q6UWN0 246 aa15.39■□□□□ 0.05
CTNND1-217ENST00000527599 ZCCHC2Q9C0B9 1178 aaKnown RBP15.39■□□□□ 0.05
CTNND1-217ENST00000527599 LGR5O75473 907 aa15.38■□□□□ 0.05
CTNND1-217ENST00000527599 ARSJQ5FYB0 599 aaPredicted RBP15.38■□□□□ 0.05
CTNND1-217ENST00000527599 POTEAQ6S8J7 498 aa15.38■□□□□ 0.05
CTNND1-217ENST00000527599 ANKMY2Q8IV38 441 aa15.38■□□□□ 0.05
CTNND1-217ENST00000527599 ABHD17AQ96GS6 310 aa15.38■□□□□ 0.05
CTNND1-217ENST00000527599 SERTM1A2A2V5 107 aa15.37■□□□□ 0.05
CTNND1-217ENST00000527599 TATP17735 454 aaPredicted RBP15.37■□□□□ 0.05
CTNND1-217ENST00000527599 MX2P20592 715 aa15.37■□□□□ 0.05
CTNND1-217ENST00000527599 NLRP8Q86W28 1048 aa15.37■□□□□ 0.05
CTNND1-217ENST00000527599 ZNF232Q9UNY5 417 aa15.37■□□□□ 0.05
CTNND1-217ENST00000527599 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
CTNND1-217ENST00000527599 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
CTNND1-217ENST00000527599 FAM181BA6NEQ2 426 aa15.35■□□□□ 0.05
CTNND1-217ENST00000527599 PSMA6P60900 246 aaKnown RBP15.35■□□□□ 0.05
CTNND1-217ENST00000527599 SRPK2P78362 688 aaKnown RBP15.35■□□□□ 0.05
CTNND1-217ENST00000527599 ARHGEF15O94989 841 aa15.34■□□□□ 0.05
CTNND1-217ENST00000527599 GAS2L2Q8NHY3 880 aa15.34■□□□□ 0.05
CTNND1-217ENST00000527599 ATXN7L1Q9ULK2 861 aaPredicted RBP15.34■□□□□ 0.05
CTNND1-217ENST00000527599 CELA2BP08218 269 aaPredicted RBP15.33■□□□□ 0.04
CTNND1-217ENST00000527599 SVOPQ8N4V2 548 aa15.33■□□□□ 0.04
CTNND1-217ENST00000527599 ACDQ96AP0 544 aa15.33■□□□□ 0.04
CTNND1-217ENST00000527599 PCDHGC4Q9Y5F7 938 aa15.33■□□□□ 0.04
CTNND1-217ENST00000527599 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
CTNND1-217ENST00000527599 C2CD2LO14523 706 aa15.32■□□□□ 0.04
CTNND1-217ENST00000527599 HIRAP54198 1017 aaPredicted RBP15.32■□□□□ 0.04
CTNND1-217ENST00000527599 SCG3Q8WXD2 468 aaKnown RBP15.32■□□□□ 0.04
CTNND1-217ENST00000527599 PHF24Q9UPV7 400 aa15.32■□□□□ 0.04
CTNND1-217ENST00000527599 HCN4Q9Y3Q4 1203 aa15.32■□□□□ 0.04
CTNND1-217ENST00000527599 ATXN7O15265 892 aaPredicted RBP15.31■□□□□ 0.04
CTNND1-217ENST00000527599 PPP1R12BO60237 982 aaPredicted RBP15.31■□□□□ 0.04
CTNND1-217ENST00000527599 CTBSQ01459 385 aa15.31■□□□□ 0.04
CTNND1-217ENST00000527599 FIGNL1Q6PIW4 674 aa15.31■□□□□ 0.04
CTNND1-217ENST00000527599 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
CTNND1-217ENST00000527599 HINFPQ9BQA5 517 aa15.31■□□□□ 0.04
CTNND1-217ENST00000527599 ADAMTS8Q9UP79 889 aa15.3■□□□□ 0.04
CTNND1-217ENST00000527599 FGFR3P22607 806 aa15.29■□□□□ 0.04
CTNND1-217ENST00000527599 TNP2Q05952 138 aa15.29■□□□□ 0.04
CTNND1-217ENST00000527599 C2orf49Q9BVC5 232 aaPredicted RBP15.29■□□□□ 0.04
CTNND1-217ENST00000527599 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.28■□□□□ 0.04
CTNND1-217ENST00000527599 PHACTR1Q9C0D0 580 aa15.28■□□□□ 0.04
CTNND1-217ENST00000527599 DCDC2BA2VCK2 349 aa15.27■□□□□ 0.04
CTNND1-217ENST00000527599 STAG2Q8N3U4 1231 aa15.27■□□□□ 0.04
CTNND1-217ENST00000527599 MAPTP10636 758 aaKnown RBP15.26■□□□□ 0.03
CTNND1-217ENST00000527599 C1orf53Q5VUE5 145 aa15.26■□□□□ 0.03
CTNND1-217ENST00000527599 LRRC69Q6ZNQ3 347 aa15.26■□□□□ 0.03
CTNND1-217ENST00000527599 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
CTNND1-217ENST00000527599 ZMIZ1Q9ULJ6 1067 aa15.26■□□□□ 0.03
CTNND1-217ENST00000527599 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
CTNND1-217ENST00000527599 MAP2K3P46734 347 aa15.25■□□□□ 0.03
CTNND1-217ENST00000527599 SAMD5Q5TGI4 173 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms