RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 PAPPAQ13219 1627 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 E9PSI1 815 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 USP16Q9Y5T5 823 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 RGPD3A6NKT7 1758 aaPredicted RBP13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 RGPD4Q7Z3J3 1758 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
UBQLN1-204ENST00000527373 KDM3BQ7LBC6 1761 aa13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 GNPATO15228 680 aa13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 CRKLP46109 303 aaKnown RBP13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
UBQLN1-204ENST00000527373 PHF14O94880 888 aa13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 SLFN5Q08AF3 891 aa13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 R3HDM1Q15032 1099 aaKnown RBP13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 SLC15A2Q16348 729 aa13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 ARXQ96QS3 562 aa13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
UBQLN1-204ENST00000527373 RREB1Q92766 1687 aa13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 PSDA5PKW4 1024 aaPredicted RBP13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 A1BGP04217 495 aa13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 PIP4K2AP48426 406 aaPredicted RBP13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 RC3H1Q5TC82 1133 aaKnown RBP13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 RTCBQ9Y3I0 505 aaKnown RBP13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
UBQLN1-204ENST00000527373 C5P01031 1676 aa13.53□□□□□ -0.24
UBQLN1-204ENST00000527373 NUP188Q5SRE5 1749 aa13.53□□□□□ -0.24
UBQLN1-204ENST00000527373 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
UBQLN1-204ENST00000527373 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
UBQLN1-204ENST00000527373 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
UBQLN1-204ENST00000527373 TWISTNBQ3B726 338 aaPredicted RBP13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 TSPYL6Q8N831 410 aa13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 C4BP0C0L5 1744 aa13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 TJP1Q07157 1748 aa13.52□□□□□ -0.25
UBQLN1-204ENST00000527373 TCERG1O14776 1098 aaKnown RBP13.51□□□□□ -0.25
UBQLN1-204ENST00000527373 RPS6KA4O75676 772 aa13.51□□□□□ -0.25
UBQLN1-204ENST00000527373 MYL6BP14649 208 aa13.51□□□□□ -0.25
UBQLN1-204ENST00000527373 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
UBQLN1-204ENST00000527373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
UBQLN1-204ENST00000527373 HOXB7P09629 217 aa13.5□□□□□ -0.25
UBQLN1-204ENST00000527373 RFC4P35249 363 aa13.5□□□□□ -0.25
UBQLN1-204ENST00000527373 FLAD1Q8NFF5 587 aa13.5□□□□□ -0.25
UBQLN1-204ENST00000527373 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
UBQLN1-204ENST00000527373 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
UBQLN1-204ENST00000527373 MYH14Q7Z406 1995 aaKnown RBP13.49□□□□□ -0.25
UBQLN1-204ENST00000527373 ANXA1P04083 346 aa13.49□□□□□ -0.25
UBQLN1-204ENST00000527373 SSFA2P28290 1259 aa13.49□□□□□ -0.25
UBQLN1-204ENST00000527373 CCDC30Q5VVM6 783 aa13.49□□□□□ -0.25
UBQLN1-204ENST00000527373 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
UBQLN1-204ENST00000527373 COL5A3P25940 1745 aaPredicted RBP13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 IL6STP40189 918 aaPredicted RBP13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 ARHGEF1Q92888 912 aaKnown RBP13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
UBQLN1-204ENST00000527373 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 A0A087WZG4 1122 aa13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 ZPR1O75312 459 aa13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 VAMP4O75379 141 aa13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
UBQLN1-204ENST00000527373 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
UBQLN1-204ENST00000527373 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBQLN1-204ENST00000527373 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.25
UBQLN1-204ENST00000527373 COL15A1P39059 1388 aa13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 ERBB4Q15303 1308 aa13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 SRP68Q9UHB9 627 aaKnown RBP13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
UBQLN1-204ENST00000527373 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
UBQLN1-204ENST00000527373 PDIA6Q15084 440 aa13.44□□□□□ -0.26
UBQLN1-204ENST00000527373 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms