RNA–Protein interactions for RNA: ENST00000527308.5

PDZD3-207, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-207ENST00000527308 POLRMTO00411 1230 aaKnown RBP13.96□□□□□ -0.17
PDZD3-207ENST00000527308 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
PDZD3-207ENST00000527308 CHRNA5P30532 468 aa13.96□□□□□ -0.17
PDZD3-207ENST00000527308 MTHFSP49914 203 aa13.96□□□□□ -0.17
PDZD3-207ENST00000527308 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDZD3-207ENST00000527308 SRP68Q9UHB9 627 aaKnown RBP13.96□□□□□ -0.17
PDZD3-207ENST00000527308 SUPT16HQ9Y5B9 1047 aaKnown RBP13.96□□□□□ -0.17
PDZD3-207ENST00000527308 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.18
PDZD3-207ENST00000527308 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
PDZD3-207ENST00000527308 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
PDZD3-207ENST00000527308 MYBBP1AQ9BQG0 1328 aaKnown RBP13.95□□□□□ -0.18
PDZD3-207ENST00000527308 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
PDZD3-207ENST00000527308 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
PDZD3-207ENST00000527308 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
PDZD3-207ENST00000527308 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
PDZD3-207ENST00000527308 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
PDZD3-207ENST00000527308 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
PDZD3-207ENST00000527308 SCN11AQ9UI33 1791 aa13.95□□□□□ -0.18
PDZD3-207ENST00000527308 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
PDZD3-207ENST00000527308 CCDC88AQ3V6T2 1871 aa13.94□□□□□ -0.18
PDZD3-207ENST00000527308 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
PDZD3-207ENST00000527308 INTS5Q6P9B9 1019 aaKnown RBP13.94□□□□□ -0.18
PDZD3-207ENST00000527308 CAPN15O75808 1086 aa13.93□□□□□ -0.18
PDZD3-207ENST00000527308 LMNB1P20700 586 aa13.93□□□□□ -0.18
PDZD3-207ENST00000527308 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
PDZD3-207ENST00000527308 ZPR1O75312 459 aa13.92□□□□□ -0.18
PDZD3-207ENST00000527308 TIAM2Q8IVF5 1701 aa13.92□□□□□ -0.18
PDZD3-207ENST00000527308 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
PDZD3-207ENST00000527308 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
PDZD3-207ENST00000527308 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
PDZD3-207ENST00000527308 RASSF7Q02833 373 aa13.91□□□□□ -0.18
PDZD3-207ENST00000527308 USPL1Q5W0Q7 1092 aa13.91□□□□□ -0.18
PDZD3-207ENST00000527308 PNISRQ8TF01 805 aaKnown RBP13.9□□□□□ -0.18
PDZD3-207ENST00000527308 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
PDZD3-207ENST00000527308 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
PDZD3-207ENST00000527308 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.19
PDZD3-207ENST00000527308 NEFLP07196 543 aa13.89□□□□□ -0.19
PDZD3-207ENST00000527308 NFIXQ14938 502 aa13.89□□□□□ -0.19
PDZD3-207ENST00000527308 TTLL6Q8N841 843 aa13.89□□□□□ -0.19
PDZD3-207ENST00000527308 DICER1Q9UPY3 1922 aaKnown RBP13.89□□□□□ -0.19
PDZD3-207ENST00000527308 VIRMAQ69YN4 1812 aaKnown RBP13.88□□□□□ -0.19
PDZD3-207ENST00000527308 SERPINB2P05120 415 aa13.88□□□□□ -0.19
PDZD3-207ENST00000527308 CYP19A1P11511 503 aaPredicted RBP13.88□□□□□ -0.19
PDZD3-207ENST00000527308 DPY19L2Q6NUT2 758 aa13.88□□□□□ -0.19
PDZD3-207ENST00000527308 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
PDZD3-207ENST00000527308 FAM9BQ8IZU0 186 aa13.88□□□□□ -0.19
PDZD3-207ENST00000527308 COL15A1P39059 1388 aa13.87□□□□□ -0.19
PDZD3-207ENST00000527308 POTECB2RU33 542 aa13.87□□□□□ -0.19
PDZD3-207ENST00000527308 AKAP4Q5JQC9 854 aa13.87□□□□□ -0.19
PDZD3-207ENST00000527308 ERICH6BQ5W0A0 696 aa13.87□□□□□ -0.19
PDZD3-207ENST00000527308 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
PDZD3-207ENST00000527308 SLC52A2Q9HAB3 445 aa13.87□□□□□ -0.19
PDZD3-207ENST00000527308 H0YIN7 160 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 NFKBIEO00221 500 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 BCL2L12Q9HB09 334 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 PDZRN3Q9UPQ7 1066 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 FER1L6Q2WGJ9 1857 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 MRC1P22897 1456 aa13.86□□□□□ -0.19
PDZD3-207ENST00000527308 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
PDZD3-207ENST00000527308 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
PDZD3-207ENST00000527308 PANK3Q9H999 370 aa13.85□□□□□ -0.19
PDZD3-207ENST00000527308 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
PDZD3-207ENST00000527308 ZBTB1Q9Y2K1 713 aa13.84□□□□□ -0.19
PDZD3-207ENST00000527308 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.19
PDZD3-207ENST00000527308 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.2
PDZD3-207ENST00000527308 IL13P35225 146 aa13.83□□□□□ -0.2
PDZD3-207ENST00000527308 RNMTO43148 476 aaKnown RBP13.82□□□□□ -0.2
PDZD3-207ENST00000527308 MORC1Q86VD1 984 aa13.82□□□□□ -0.2
PDZD3-207ENST00000527308 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
PDZD3-207ENST00000527308 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
PDZD3-207ENST00000527308 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
PDZD3-207ENST00000527308 PDE6BP35913 854 aa13.81□□□□□ -0.2
PDZD3-207ENST00000527308 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
PDZD3-207ENST00000527308 ERFEQ4G0M1 354 aa13.81□□□□□ -0.2
PDZD3-207ENST00000527308 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
PDZD3-207ENST00000527308 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
PDZD3-207ENST00000527308 PCNTO95613 3336 aa13.8□□□□□ -0.2
PDZD3-207ENST00000527308 A0A087WZG4 1122 aa13.8□□□□□ -0.2
PDZD3-207ENST00000527308 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
PDZD3-207ENST00000527308 KNSTRNQ9Y448 316 aa13.8□□□□□ -0.2
PDZD3-207ENST00000527308 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
PDZD3-207ENST00000527308 ARFGEF2Q9Y6D5 1785 aa13.79□□□□□ -0.2
PDZD3-207ENST00000527308 SCN4AP35499 1836 aa13.79□□□□□ -0.2
PDZD3-207ENST00000527308 C21orf2O43822 256 aa13.79□□□□□ -0.2
PDZD3-207ENST00000527308 STARD3NLO95772 234 aa13.79□□□□□ -0.2
PDZD3-207ENST00000527308 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
PDZD3-207ENST00000527308 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
PDZD3-207ENST00000527308 ZNF622Q969S3 477 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDZD3-207ENST00000527308 PRDM10Q9NQV6 1147 aa13.79□□□□□ -0.2
PDZD3-207ENST00000527308 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
PDZD3-207ENST00000527308 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
PDZD3-207ENST00000527308 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
PDZD3-207ENST00000527308 CACNA1SQ13698 1873 aa13.77□□□□□ -0.21
PDZD3-207ENST00000527308 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
PDZD3-207ENST00000527308 TBC1D9BQ66K14 1250 aa13.77□□□□□ -0.21
PDZD3-207ENST00000527308 PRR5LQ6MZQ0 368 aa13.77□□□□□ -0.21
PDZD3-207ENST00000527308 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
PDZD3-207ENST00000527308 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
PDZD3-207ENST00000527308 TAOK3Q9H2K8 898 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms