RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NRXN2Q9P2S2 1712 aa19.07■□□□□ 0.64
SSRP1-203ENST00000526696 TNRC18O15417 2968 aaPredicted RBP19.06■□□□□ 0.64
SSRP1-203ENST00000526696 CCDC85CA6NKD9 419 aa19.06■□□□□ 0.64
SSRP1-203ENST00000526696 DPY19L2Q6NUT2 758 aa19.06■□□□□ 0.64
SSRP1-203ENST00000526696 TESK2Q96S53 571 aa19.06■□□□□ 0.64
SSRP1-203ENST00000526696 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
SSRP1-203ENST00000526696 TJP1Q07157 1748 aa19.04■□□□□ 0.64
SSRP1-203ENST00000526696 FER1L6Q2WGJ9 1857 aa19.04■□□□□ 0.64
SSRP1-203ENST00000526696 TTLL6Q8N841 843 aa19.04■□□□□ 0.64
SSRP1-203ENST00000526696 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
SSRP1-203ENST00000526696 DDNO94850 711 aaPredicted RBP19.03■□□□□ 0.64
SSRP1-203ENST00000526696 TMEM88BA6NKF7 163 aa19.02■□□□□ 0.64
SSRP1-203ENST00000526696 ITGBL1O95965 494 aaPredicted RBP19.02■□□□□ 0.64
SSRP1-203ENST00000526696 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
SSRP1-203ENST00000526696 ANKRD26Q9UPS8 1709 aa19.02■□□□□ 0.63
SSRP1-203ENST00000526696 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
SSRP1-203ENST00000526696 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
SSRP1-203ENST00000526696 NFIXQ14938 502 aa19.01■□□□□ 0.63
SSRP1-203ENST00000526696 ERFEQ4G0M1 354 aa19.01■□□□□ 0.63
SSRP1-203ENST00000526696 USPL1Q5W0Q7 1092 aa19.01■□□□□ 0.63
SSRP1-203ENST00000526696 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
SSRP1-203ENST00000526696 C2CD5Q86YS7 1000 aa19■□□□□ 0.63
SSRP1-203ENST00000526696 LDHDQ86WU2 507 aa18.99■□□□□ 0.63
SSRP1-203ENST00000526696 RASSF10A6NK89 507 aa18.98■□□□□ 0.63
SSRP1-203ENST00000526696 ANKRD31Q8N7Z5 1873 aa18.98■□□□□ 0.63
SSRP1-203ENST00000526696 WASHC2AQ641Q2 1341 aa18.98■□□□□ 0.63
SSRP1-203ENST00000526696 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
SSRP1-203ENST00000526696 BCL2L12Q9HB09 334 aa18.97■□□□□ 0.63
SSRP1-203ENST00000526696 SCN4AP35499 1836 aa18.97■□□□□ 0.63
SSRP1-203ENST00000526696 SERPINB2P05120 415 aa18.96■□□□□ 0.63
SSRP1-203ENST00000526696 TAF1DQ9H5J8 278 aaPredicted RBP18.96■□□□□ 0.63
SSRP1-203ENST00000526696 ZNF219Q9P2Y4 722 aaPredicted RBP18.96■□□□□ 0.63
SSRP1-203ENST00000526696 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
SSRP1-203ENST00000526696 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
SSRP1-203ENST00000526696 ST20-MTHFSA0A0A6YYL1 179 aa18.95■□□□□ 0.62
SSRP1-203ENST00000526696 C21orf2O43822 256 aa18.95■□□□□ 0.62
SSRP1-203ENST00000526696 ZPR1O75312 459 aa18.95■□□□□ 0.62
SSRP1-203ENST00000526696 DEFB115Q30KQ5 88 aa18.95■□□□□ 0.62
SSRP1-203ENST00000526696 SOS1Q07889 1333 aaPredicted RBP18.95■□□□□ 0.62
SSRP1-203ENST00000526696 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
SSRP1-203ENST00000526696 H0YIN7 160 aa18.94■□□□□ 0.62
SSRP1-203ENST00000526696 CABP4P57796 275 aa18.94■□□□□ 0.62
SSRP1-203ENST00000526696 MAP2K1Q02750 393 aaPredicted RBP18.94■□□□□ 0.62
SSRP1-203ENST00000526696 THSD7BQ9C0I4 1608 aa18.93■□□□□ 0.62
SSRP1-203ENST00000526696 L3MBTL3Q96JM7 780 aaPredicted RBP18.93■□□□□ 0.62
SSRP1-203ENST00000526696 LTBP3Q9NS15 1303 aa18.93■□□□□ 0.62
SSRP1-203ENST00000526696 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
SSRP1-203ENST00000526696 SLX4Q8IY92 1834 aa18.92■□□□□ 0.62
SSRP1-203ENST00000526696 CASP8AP2Q9UKL3 1982 aa18.92■□□□□ 0.62
SSRP1-203ENST00000526696 DNAJC10Q8IXB1 793 aa18.91■□□□□ 0.62
SSRP1-203ENST00000526696 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
SSRP1-203ENST00000526696 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
SSRP1-203ENST00000526696 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
SSRP1-203ENST00000526696 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
SSRP1-203ENST00000526696 EAPPQ56P03 285 aaPredicted RBP18.9■□□□□ 0.62
SSRP1-203ENST00000526696 NFATC2IPQ8NCF5 419 aa18.9■□□□□ 0.62
SSRP1-203ENST00000526696 ZNF622Q969S3 477 aaKnown RBP eCLIP18.9■□□□□ 0.624e-8■■■■□ 21.5
SSRP1-203ENST00000526696 TAOK3Q9H2K8 898 aa18.9■□□□□ 0.62
SSRP1-203ENST00000526696 CACNA1SQ13698 1873 aa18.89■□□□□ 0.61
SSRP1-203ENST00000526696 TSKSQ9UJT2 592 aa18.89■□□□□ 0.61
SSRP1-203ENST00000526696 MCOLN1Q9GZU1 580 aa18.88■□□□□ 0.61
SSRP1-203ENST00000526696 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
SSRP1-203ENST00000526696 COL15A1P39059 1388 aa18.88■□□□□ 0.61
SSRP1-203ENST00000526696 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
SSRP1-203ENST00000526696 MAP1SQ66K74 1059 aaPredicted RBP18.87■□□□□ 0.61
SSRP1-203ENST00000526696 ZNF530Q6P9A1 599 aaPredicted RBP18.87■□□□□ 0.61
SSRP1-203ENST00000526696 CNTROBQ8N137 903 aa18.87■□□□□ 0.61
SSRP1-203ENST00000526696 CCDC24Q8N4L8 307 aa18.87■□□□□ 0.61
SSRP1-203ENST00000526696 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
SSRP1-203ENST00000526696 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
SSRP1-203ENST00000526696 CYP19A1P11511 503 aaPredicted RBP18.86■□□□□ 0.61
SSRP1-203ENST00000526696 ZBTB1Q9Y2K1 713 aa18.86■□□□□ 0.61
SSRP1-203ENST00000526696 MTHFSP49914 203 aa18.85■□□□□ 0.61
SSRP1-203ENST00000526696 BICDL1Q6ZP65 573 aa18.85■□□□□ 0.61
SSRP1-203ENST00000526696 ABT1Q9ULW3 272 aaKnown RBP18.85■□□□□ 0.61
SSRP1-203ENST00000526696 CLEC11AQ9Y240 323 aa18.85■□□□□ 0.61
SSRP1-203ENST00000526696 EPHX2P34913 555 aa18.84■□□□□ 0.61
SSRP1-203ENST00000526696 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.614e-7■■■□□ 19.2
SSRP1-203ENST00000526696 PLEKHO1Q53GL0 409 aaPredicted RBP18.84■□□□□ 0.61
SSRP1-203ENST00000526696 CAPNS2Q96L46 248 aa18.84■□□□□ 0.61
SSRP1-203ENST00000526696 HACL1Q9UJ83 578 aa18.84■□□□□ 0.61
SSRP1-203ENST00000526696 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.61
SSRP1-203ENST00000526696 CYP4F22Q6NT55 531 aa18.83■□□□□ 0.6
SSRP1-203ENST00000526696 BRIP1Q9BX63 1249 aa18.83■□□□□ 0.6
SSRP1-203ENST00000526696 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.6
SSRP1-203ENST00000526696 PRR5LQ6MZQ0 368 aa18.82■□□□□ 0.6
SSRP1-203ENST00000526696 TBC1D9BQ66K14 1250 aa18.81■□□□□ 0.6
SSRP1-203ENST00000526696 GPR101Q96P66 508 aaPredicted RBP18.81■□□□□ 0.6
SSRP1-203ENST00000526696 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
SSRP1-203ENST00000526696 RNF123Q5XPI4 1314 aa18.8■□□□□ 0.6
SSRP1-203ENST00000526696 PDE6BP35913 854 aa18.8■□□□□ 0.6
SSRP1-203ENST00000526696 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
SSRP1-203ENST00000526696 BEGAINQ9BUH8 593 aa18.8■□□□□ 0.6
SSRP1-203ENST00000526696 GRM1Q13255 1194 aa18.79■□□□□ 0.6
SSRP1-203ENST00000526696 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
SSRP1-203ENST00000526696 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
SSRP1-203ENST00000526696 C7orf43Q8WVR3 580 aa18.79■□□□□ 0.6
SSRP1-203ENST00000526696 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
SSRP1-203ENST00000526696 TRPM7Q96QT4 1865 aa18.78■□□□□ 0.6
SSRP1-203ENST00000526696 SLC24A1O60721 1099 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms