RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PHF24Q9UPV7 400 aa7.59□□□□□ -1.19
CD44-219ENST00000525685 MAFBQ9Y5Q3 323 aaPredicted RBP7.59□□□□□ -1.19
CD44-219ENST00000525685 NBPF1Q3BBV0 1214 aa7.58□□□□□ -1.2
CD44-219ENST00000525685 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
CD44-219ENST00000525685 LARGE2Q8N3Y3 721 aa7.58□□□□□ -1.2
CD44-219ENST00000525685 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
CD44-219ENST00000525685 ACDQ96AP0 544 aa7.58□□□□□ -1.2
CD44-219ENST00000525685 CALR3Q96L12 384 aaKnown RBP7.58□□□□□ -1.2
CD44-219ENST00000525685 ATXN7L1Q9ULK2 861 aaPredicted RBP7.58□□□□□ -1.2
CD44-219ENST00000525685 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
CD44-219ENST00000525685 BNIP3LO60238 219 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 DKK1O94907 266 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 MAP3K10Q02779 954 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 NLRP8Q86W28 1048 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 SIX5Q8N196 739 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 NSFL1CQ9UNZ2 370 aaKnown RBP7.57□□□□□ -1.2
CD44-219ENST00000525685 PARP3Q9Y6F1 533 aa7.57□□□□□ -1.2
CD44-219ENST00000525685 A0A1W2PNR3 127 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 M0R2N6 131 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 SUPT5HO00267 1087 aaKnown RBP7.56□□□□□ -1.2
CD44-219ENST00000525685 TATP17735 454 aaPredicted RBP7.56□□□□□ -1.2
CD44-219ENST00000525685 MAP2K3P46734 347 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 GSK3AP49840 483 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 TEAD4Q15561 434 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 FIGNL1Q6PIW4 674 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 ZIC5Q96T25 663 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
CD44-219ENST00000525685 ZCCHC2Q9C0B9 1178 aaKnown RBP7.56□□□□□ -1.2
CD44-219ENST00000525685 BCRP11274 1271 aa7.55□□□□□ -1.2
CD44-219ENST00000525685 NOS2P35228 1153 aa7.55□□□□□ -1.2
CD44-219ENST00000525685 TXLNAP40222 546 aa7.55□□□□□ -1.2
CD44-219ENST00000525685 ARSJQ5FYB0 599 aaPredicted RBP7.55□□□□□ -1.2
CD44-219ENST00000525685 TBCELQ5QJ74 424 aa7.55□□□□□ -1.2
CD44-219ENST00000525685 L3MBTL2Q969R5 705 aa7.55□□□□□ -1.2
CD44-219ENST00000525685 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
CD44-219ENST00000525685 PCDHGC4Q9Y5F7 938 aa7.55□□□□□ -1.2
CD44-219ENST00000525685 RASA1P20936 1047 aa7.54□□□□□ -1.2
CD44-219ENST00000525685 FGFR3P22607 806 aa7.54□□□□□ -1.2
CD44-219ENST00000525685 KANK4Q5T7N3 995 aaPredicted RBP7.54□□□□□ -1.2
CD44-219ENST00000525685 KLRG1Q96E93 195 aa7.54□□□□□ -1.2
CD44-219ENST00000525685 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
CD44-219ENST00000525685 ENAMQ9NRM1 1142 aa7.54□□□□□ -1.2
CD44-219ENST00000525685 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
CD44-219ENST00000525685 HCN2Q9UL51 889 aa7.54□□□□□ -1.2
CD44-219ENST00000525685 SFI1A8K8P3 1242 aa7.53□□□□□ -1.2
CD44-219ENST00000525685 C2CD2LO14523 706 aa7.53□□□□□ -1.2
CD44-219ENST00000525685 ATXN7O15265 892 aaPredicted RBP7.53□□□□□ -1.2
CD44-219ENST00000525685 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
CD44-219ENST00000525685 CTBSQ01459 385 aa7.53□□□□□ -1.2
CD44-219ENST00000525685 TSEN2Q8NCE0 465 aaKnown RBP7.53□□□□□ -1.2
CD44-219ENST00000525685 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
CD44-219ENST00000525685 SERTM1A2A2V5 107 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
CD44-219ENST00000525685 EML1O00423 815 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 OIP5O43482 229 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 BMP4P12644 408 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 PSMA6P60900 246 aaKnown RBP7.52□□□□□ -1.21
CD44-219ENST00000525685 TNP2Q05952 138 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 SH3PXD2AQ5TCZ1 1133 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 POTEAQ6S8J7 498 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 ZNF777Q9ULD5 760 aaPredicted RBP7.52□□□□□ -1.21
CD44-219ENST00000525685 ZNF232Q9UNY5 417 aa7.52□□□□□ -1.21
CD44-219ENST00000525685 FAM157BP0CG42 384 aa7.51□□□□□ -1.21
CD44-219ENST00000525685 MAPTP10636 758 aaKnown RBP7.51□□□□□ -1.21
CD44-219ENST00000525685 PTK7Q13308 1070 aa7.51□□□□□ -1.21
CD44-219ENST00000525685 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
CD44-219ENST00000525685 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
CD44-219ENST00000525685 BICDL1Q6ZP65 573 aa7.51□□□□□ -1.21
CD44-219ENST00000525685 C1orf229Q6ZS94 237 aaPredicted RBP7.51□□□□□ -1.21
CD44-219ENST00000525685 GDF2Q9UK05 429 aaPredicted RBP7.51□□□□□ -1.21
CD44-219ENST00000525685 RBM19Q9Y4C8 960 aaKnown RBP7.51□□□□□ -1.21
CD44-219ENST00000525685 DCDC2BA2VCK2 349 aa7.5□□□□□ -1.21
CD44-219ENST00000525685 C21orf2O43822 256 aa7.5□□□□□ -1.21
CD44-219ENST00000525685 LMOD1P29536 600 aaPredicted RBP7.5□□□□□ -1.21
CD44-219ENST00000525685 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
CD44-219ENST00000525685 SEC13P55735 322 aa7.5□□□□□ -1.21
CD44-219ENST00000525685 RASSF7Q02833 373 aa7.5□□□□□ -1.21
CD44-219ENST00000525685 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
CD44-219ENST00000525685 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
CD44-219ENST00000525685 SCARF2Q96GP6 870 aaPredicted RBP7.5□□□□□ -1.21
CD44-219ENST00000525685 GPC6Q9Y625 555 aaPredicted RBP7.5□□□□□ -1.21
CD44-219ENST00000525685 GJA3Q9Y6H8 435 aa7.5□□□□□ -1.21
CD44-219ENST00000525685 KHNYNO15037 678 aaKnown RBP7.49□□□□□ -1.21
CD44-219ENST00000525685 FAM182BQ5T319 152 aa7.49□□□□□ -1.21
CD44-219ENST00000525685 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
CD44-219ENST00000525685 NEDD1Q8NHV4 660 aa7.49□□□□□ -1.21
CD44-219ENST00000525685 FAM196BA6NMK8 535 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 SHISA8B8ZZ34 492 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L21D6R901 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
CD44-219ENST00000525685 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms