RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-216	ENST00000525506	AFDN	P55196	1824 aa	Known RBP	13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	CANX	P27824	592 aa	Known RBP	13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	DDR1	Q08345	913 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	DCTN1	Q14203	1278 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	USPL1	Q5W0Q7	1092 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	ZNF790	Q6PG37	636 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	MCM10	Q7L590	875 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	VSIG10	Q8N0Z9	540 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	BRCA1	P38398	1863 aa	Known RBP	13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	CEMIP	Q8WUJ3	1361 aa		13.92	□□□□□ -0.18
RBBP4-216	ENST00000525506	C10orf71	Q711Q0	1435 aa		13.91	□□□□□ -0.18
RBBP4-216	ENST00000525506	ZPR1	O75312	459 aa		13.91	□□□□□ -0.18
RBBP4-216	ENST00000525506	DPEP1	P16444	411 aa		13.91	□□□□□ -0.18
RBBP4-216	ENST00000525506	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.91	□□□□□ -0.18
RBBP4-216	ENST00000525506	COL15A1	P39059	1388 aa		13.91	□□□□□ -0.18
RBBP4-216	ENST00000525506	HEG1	Q9ULI3	1381 aa		13.91	□□□□□ -0.18
RBBP4-216	ENST00000525506	BTBD11	A6QL63	1104 aa		13.9	□□□□□ -0.18
RBBP4-216	ENST00000525506	PNN	Q9H307	717 aa	Known RBP	13.9	□□□□□ -0.18
RBBP4-216	ENST00000525506	POLRMT	O00411	1230 aa	Known RBP	13.89	□□□□□ -0.19
RBBP4-216	ENST00000525506	TM4SF1	P30408	202 aa		13.89	□□□□□ -0.19
RBBP4-216	ENST00000525506	TGFB2	P61812	414 aa		13.89	□□□□□ -0.19
RBBP4-216	ENST00000525506	RTF1	Q92541	710 aa	Known RBP	13.89	□□□□□ -0.19
RBBP4-216	ENST00000525506	BCL2L12	Q9HB09	334 aa		13.89	□□□□□ -0.19
RBBP4-216	ENST00000525506	NARF	Q9UHQ1	456 aa		13.89	□□□□□ -0.19
RBBP4-216	ENST00000525506	PRAMEF22	A3QJZ6	481 aa		13.88	□□□□□ -0.19
RBBP4-216	ENST00000525506	STARD3NL	O95772	234 aa		13.88	□□□□□ -0.19
RBBP4-216	ENST00000525506	A1BG	P04217	495 aa		13.88	□□□□□ -0.19
RBBP4-216	ENST00000525506	FMNL2	Q96PY5	1086 aa		13.88	□□□□□ -0.19
RBBP4-216	ENST00000525506	BCS1L	Q9Y276	419 aa		13.88	□□□□□ -0.19
RBBP4-216	ENST00000525506	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.88	□□□□□ -0.19
RBBP4-216	ENST00000525506	HTATSF1	O43719	755 aa	Known RBP	13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	NEFM	P07197	916 aa		13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	KCNA3	P22001	575 aa		13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	PIP4K2A	P48426	406 aa	Predicted RBP	13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	EIF5	P55010	431 aa	Known RBP	13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	NFIX	Q14938	502 aa		13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	MIS18A	Q9NYP9	233 aa		13.87	□□□□□ -0.19
RBBP4-216	ENST00000525506	ARFGEF1	Q9Y6D6	1849 aa		13.86	□□□□□ -0.19
RBBP4-216	ENST00000525506	CHRNA5	P30532	468 aa		13.86	□□□□□ -0.19
RBBP4-216	ENST00000525506	BICDL1	Q6ZP65	573 aa		13.86	□□□□□ -0.19
RBBP4-216	ENST00000525506	PLEKHF1	Q96S99	279 aa		13.86	□□□□□ -0.19
RBBP4-216	ENST00000525506	USP16	Q9Y5T5	823 aa		13.86	□□□□□ -0.19
RBBP4-216	ENST00000525506	NRXN2	Q9P2S2	1712 aa		13.86	□□□□□ -0.19
RBBP4-216	ENST00000525506	ATP10D	Q9P241	1426 aa		13.85	□□□□□ -0.19
RBBP4-216	ENST00000525506	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.85	□□□□□ -0.19
RBBP4-216	ENST00000525506	TBC1D2B	Q9UPU7	963 aa		13.85	□□□□□ -0.19
RBBP4-216	ENST00000525506	SCN7A	Q01118	1682 aa		13.85	□□□□□ -0.19
RBBP4-216	ENST00000525506	ZNF526	Q8TF50	670 aa	Predicted RBP	13.84	□□□□□ -0.19
RBBP4-216	ENST00000525506	THUMPD2	Q9BTF0	503 aa	Known RBP	13.84	□□□□□ -0.19
RBBP4-216	ENST00000525506	SERPINB2	P05120	415 aa		13.83	□□□□□ -0.2
RBBP4-216	ENST00000525506	TAF7	Q15545	349 aa	Predicted RBP	13.83	□□□□□ -0.2
RBBP4-216	ENST00000525506	TBC1D9B	Q66K14	1250 aa		13.83	□□□□□ -0.2
RBBP4-216	ENST00000525506	ARHGAP27	Q6ZUM4	889 aa		13.83	□□□□□ -0.2
RBBP4-216	ENST00000525506	MAPK8IP3	Q9UPT6	1336 aa		13.83	□□□□□ -0.2
RBBP4-216	ENST00000525506	KDM3B	Q7LBC6	1761 aa		13.83	□□□□□ -0.2
RBBP4-216	ENST00000525506	ANKRD31	Q8N7Z5	1873 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	BCOR	Q6W2J9	1755 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506		A0A087WZG4	1122 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	IL6ST	P40189	918 aa	Predicted RBP	13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	NFE2L2	Q16236	605 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	CCDC24	Q8N4L8	307 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	PIM2	Q9P1W9	311 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	ADCY9	O60503	1353 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	CARMIL3	Q8ND23	1372 aa		13.82	□□□□□ -0.2
RBBP4-216	ENST00000525506	SBF1	O95248	1867 aa		13.81	□□□□□ -0.2
RBBP4-216	ENST00000525506	GIGYF1	O75420	1035 aa	Predicted RBP	13.81	□□□□□ -0.2
RBBP4-216	ENST00000525506	SNRPA1	P09661	255 aa	Known RBP	13.81	□□□□□ -0.2
RBBP4-216	ENST00000525506	C1QTNF8	P60827	252 aa		13.81	□□□□□ -0.2
RBBP4-216	ENST00000525506	DLEC1	Q9Y238	1755 aa		13.81	□□□□□ -0.2
RBBP4-216	ENST00000525506	CAMTA2	O94983	1202 aa		13.8	□□□□□ -0.2
RBBP4-216	ENST00000525506	WDR43	Q15061	677 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
RBBP4-216	ENST00000525506	DALRD3	Q5D0E6	543 aa	Known RBP	13.8	□□□□□ -0.2
RBBP4-216	ENST00000525506	LAMB4	A4D0S4	1761 aa		13.8	□□□□□ -0.2
RBBP4-216	ENST00000525506	CCDC88A	Q3V6T2	1871 aa		13.8	□□□□□ -0.2
RBBP4-216	ENST00000525506	CACNA1S	Q13698	1873 aa		13.79	□□□□□ -0.2
RBBP4-216	ENST00000525506	NBPF26	B4DH59	902 aa		13.79	□□□□□ -0.2
RBBP4-216	ENST00000525506	NBPF10	Q6P3W6	841 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-216	ENST00000525506	DZIP3	Q86Y13	1208 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-216	ENST00000525506	NBPF15	Q8N660	670 aa		13.79	□□□□□ -0.2
RBBP4-216	ENST00000525506	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.79	□□□□□ -0.2
RBBP4-216	ENST00000525506	LMOD3	Q0VAK6	560 aa		13.78	□□□□□ -0.2
RBBP4-216	ENST00000525506	NPM2	Q86SE8	214 aa	Known RBP	13.78	□□□□□ -0.2
RBBP4-216	ENST00000525506	CCDC146	Q8IYE0	955 aa		13.78	□□□□□ -0.2
RBBP4-216	ENST00000525506	COL11A2	P13942	1736 aa	Predicted RBP	13.78	□□□□□ -0.2
RBBP4-216	ENST00000525506	ANP32C	O43423	234 aa		13.77	□□□□□ -0.21
RBBP4-216	ENST00000525506	C2CD5	Q86YS7	1000 aa		13.77	□□□□□ -0.21
RBBP4-216	ENST00000525506	RUNDC1	Q96C34	613 aa		13.77	□□□□□ -0.21
RBBP4-216	ENST00000525506	RRP7A	Q9Y3A4	280 aa	Known RBP	13.77	□□□□□ -0.21
RBBP4-216	ENST00000525506	NUP98	P52948	1817 aa		13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	RIPK4	P57078	832 aa		13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	EIF4A1	P60842	406 aa	Known RBP	13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	C9orf131	Q5VYM1	1079 aa		13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	PRR5L	Q6MZQ0	368 aa		13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	NGEF	Q8N5V2	710 aa		13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	PNISR	Q8TF01	805 aa	Known RBP	13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	SETDB2	Q96T68	719 aa		13.76	□□□□□ -0.21
RBBP4-216	ENST00000525506	SENP3-EIF4A1	A0A087X0R7	540 aa		13.75	□□□□□ -0.21
RBBP4-216	ENST00000525506	TMPO	P42166	694 aa	Known RBP	13.75	□□□□□ -0.21
RBBP4-216	ENST00000525506	NEUROD2	Q15784	382 aa		13.75	□□□□□ -0.21
RBBP4-216	ENST00000525506	BABAM1	Q9NWV8	329 aa		13.75	□□□□□ -0.21

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