RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 SPATA31A1Q5TZJ5 1347 aa8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
CCDC90B-204ENST00000525504 PPIP5K1Q6PFW1 1433 aa8.47□□□□□ -1.05
CCDC90B-204ENST00000525504 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
CCDC90B-204ENST00000525504 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
CCDC90B-204ENST00000525504 TOR4AQ9NXH8 423 aa8.47□□□□□ -1.05
CCDC90B-204ENST00000525504 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
CCDC90B-204ENST00000525504 EP400Q96L91 3159 aa8.47□□□□□ -1.05
CCDC90B-204ENST00000525504 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.05
CCDC90B-204ENST00000525504 CARD11Q9BXL7 1154 aa8.46□□□□□ -1.06
CCDC90B-204ENST00000525504 GLI3P10071 1580 aa8.46□□□□□ -1.06
CCDC90B-204ENST00000525504 USP6P35125 1406 aa8.46□□□□□ -1.06
CCDC90B-204ENST00000525504 TLL1O43897 1013 aa8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 EVA1CP58658 441 aa8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 THRAP3Q9Y2W1 955 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 TTC21BQ7Z4L5 1316 aa8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 KIAA1210Q9ULL0 1709 aa8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 CPSF1Q10570 1443 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-204ENST00000525504 PDIA6Q15084 440 aa8.44□□□□□ -1.06
CCDC90B-204ENST00000525504 DEFB132Q7Z7B7 95 aa8.44□□□□□ -1.06
CCDC90B-204ENST00000525504 ARHGEF25Q86VW2 580 aa8.44□□□□□ -1.06
CCDC90B-204ENST00000525504 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
CCDC90B-204ENST00000525504 TESK2Q96S53 571 aa8.44□□□□□ -1.06
CCDC90B-204ENST00000525504 AATKQ6ZMQ8 1374 aa8.44□□□□□ -1.06
CCDC90B-204ENST00000525504 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 FAM196AQ6ZSG2 479 aa8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 KCNH5Q8NCM2 988 aa8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 TIMELESSQ9UNS1 1208 aa8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
CCDC90B-204ENST00000525504 ADH1BP00325 375 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 FOXC1Q12948 553 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 TTC13Q8NBP0 860 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 SLC12A5Q9H2X9 1139 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 TONSLQ96HA7 1378 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 ALS2Q96Q42 1657 aa8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 ARHGEF28Q8N1W1 1705 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-204ENST00000525504 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 USP31Q70CQ4 1352 aa8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 ST20-MTHFSA0A0A6YYL1 179 aa8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 TRIM47Q96LD4 638 aa8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
CCDC90B-204ENST00000525504 CAMTA1Q9Y6Y1 1673 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 SPDYE16A6NNV3 312 aaPredicted RBP8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 BAG6P46379 1132 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 RPIAP49247 311 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 PDE3BQ13370 1112 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 FAM182BQ5T319 152 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 CAMKK2Q96RR4 588 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 USP35Q9P2H5 1018 aa8.4□□□□□ -1.06
CCDC90B-204ENST00000525504 RGPD8O14715 1765 aaPredicted RBP8.4□□□□□ -1.07
CCDC90B-204ENST00000525504 KTN1Q86UP2 1357 aaKnown RBP8.39□□□□□ -1.07
CCDC90B-204ENST00000525504 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
CCDC90B-204ENST00000525504 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
CCDC90B-204ENST00000525504 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
CCDC90B-204ENST00000525504 TERF2IPQ9NYB0 399 aa8.39□□□□□ -1.07
CCDC90B-204ENST00000525504 COL14A1Q05707 1796 aaKnown RBP8.39□□□□□ -1.07
CCDC90B-204ENST00000525504 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 DISP2A7MBM2 1401 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 NWD2Q9ULI1 1742 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 TRIM37O94972 964 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 HDGFL2Q7Z4V5 671 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 TMC1Q8TDI8 760 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 SLC6A16Q9GZN6 736 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 SLIT3O75094 1523 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 CD163L1Q9NR16 1453 aa8.38□□□□□ -1.07
CCDC90B-204ENST00000525504 CRB1P82279 1406 aa8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 TRPM1Q7Z4N2 1603 aa8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 TOM1L2Q6ZVM7 507 aa8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 NME9Q86XW9 330 aa8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 CDHR5Q9HBB8 845 aa8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 MARF1Q9Y4F3 1742 aaKnown RBP8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
CCDC90B-204ENST00000525504 NINLQ9Y2I6 1382 aa8.36□□□□□ -1.07
CCDC90B-204ENST00000525504 APBA3O96018 575 aa8.36□□□□□ -1.07
CCDC90B-204ENST00000525504 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
CCDC90B-204ENST00000525504 BCL9O00512 1426 aa8.36□□□□□ -1.07
CCDC90B-204ENST00000525504 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 PLSCR1O15162 318 aa8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 EZH2Q15910 746 aaKnown RBP8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 DDB1Q16531 1140 aa8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 MARCH10Q8NA82 808 aaPredicted RBP8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 EDC4Q6P2E9 1401 aaKnown RBP8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
CCDC90B-204ENST00000525504 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms