RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
CDC27-202ENST00000525495 TRAPPC3LQ5T215 181 aa15.71■□□□□ 0.11
CDC27-202ENST00000525495 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.11
CDC27-202ENST00000525495 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
CDC27-202ENST00000525495 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.1
CDC27-202ENST00000525495 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.1
CDC27-202ENST00000525495 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.1
CDC27-202ENST00000525495 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDC27-202ENST00000525495 CCDC184Q52MB2 194 aa15.7■□□□□ 0.1
CDC27-202ENST00000525495 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
CDC27-202ENST00000525495 KDM3BQ7LBC6 1761 aa15.69■□□□□ 0.1
CDC27-202ENST00000525495 ZBTB1Q9Y2K1 713 aa15.69■□□□□ 0.1
CDC27-202ENST00000525495 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
CDC27-202ENST00000525495 FMNL2Q96PY5 1086 aa15.68■□□□□ 0.1
CDC27-202ENST00000525495 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
CDC27-202ENST00000525495 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
CDC27-202ENST00000525495 UTRNP46939 3433 aa15.68■□□□□ 0.1
CDC27-202ENST00000525495 GOLGB1Q14789 3259 aaKnown RBP15.68■□□□□ 0.1
CDC27-202ENST00000525495 GYS1P13807 737 aa15.67■□□□□ 0.1
CDC27-202ENST00000525495 RFC4P35249 363 aa15.67■□□□□ 0.1
CDC27-202ENST00000525495 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
CDC27-202ENST00000525495 RIPK4P57078 832 aa15.67■□□□□ 0.1
CDC27-202ENST00000525495 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
CDC27-202ENST00000525495 RRP7AQ9Y3A4 280 aaKnown RBP15.67■□□□□ 0.1
CDC27-202ENST00000525495 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
CDC27-202ENST00000525495 NLGN2Q8NFZ4 835 aa15.66■□□□□ 0.1
CDC27-202ENST00000525495 SRP68Q9UHB9 627 aaKnown RBP15.66■□□□□ 0.1
CDC27-202ENST00000525495 STARD3NLO95772 234 aa15.65■□□□□ 0.1
CDC27-202ENST00000525495 RUNDC1Q96C34 613 aa15.65■□□□□ 0.1
CDC27-202ENST00000525495 USP42Q9H9J4 1324 aaKnown RBP15.65■□□□□ 0.1
CDC27-202ENST00000525495 COL15A1P39059 1388 aa15.65■□□□□ 0.1
CDC27-202ENST00000525495 MMP10P09238 476 aa15.65■□□□□ 0.1
CDC27-202ENST00000525495 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
CDC27-202ENST00000525495 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
CDC27-202ENST00000525495 POTEHQ6S545 545 aa15.65■□□□□ 0.1
CDC27-202ENST00000525495 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
CDC27-202ENST00000525495 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
CDC27-202ENST00000525495 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
CDC27-202ENST00000525495 ANP32CO43423 234 aa15.63■□□□□ 0.09
CDC27-202ENST00000525495 A1BGP04217 495 aa15.63■□□□□ 0.09
CDC27-202ENST00000525495 EIF5P55010 431 aaKnown RBP15.63■□□□□ 0.09
CDC27-202ENST00000525495 FKBP8Q14318 412 aa15.63■□□□□ 0.09
CDC27-202ENST00000525495 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
CDC27-202ENST00000525495 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
CDC27-202ENST00000525495 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
CDC27-202ENST00000525495 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
CDC27-202ENST00000525495 PIP4K2AP48426 406 aaPredicted RBP15.61■□□□□ 0.09
CDC27-202ENST00000525495 PNISRQ8TF01 805 aaKnown RBP15.61■□□□□ 0.09
CDC27-202ENST00000525495 CD2APQ9Y5K6 639 aa15.61■□□□□ 0.09
CDC27-202ENST00000525495 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
CDC27-202ENST00000525495 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
CDC27-202ENST00000525495 LMOD3Q0VAK6 560 aa15.6■□□□□ 0.09
CDC27-202ENST00000525495 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
CDC27-202ENST00000525495 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
CDC27-202ENST00000525495 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
CDC27-202ENST00000525495 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
CDC27-202ENST00000525495 ZPR1O75312 459 aa15.59■□□□□ 0.09
CDC27-202ENST00000525495 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
CDC27-202ENST00000525495 DDR1Q08345 913 aa15.59■□□□□ 0.09
CDC27-202ENST00000525495 ZNF330Q9Y3S2 320 aaPredicted RBP15.59■□□□□ 0.09
CDC27-202ENST00000525495 APAF1O14727 1248 aa15.59■□□□□ 0.09
CDC27-202ENST00000525495 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
CDC27-202ENST00000525495 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
CDC27-202ENST00000525495 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
CDC27-202ENST00000525495 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
CDC27-202ENST00000525495 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
CDC27-202ENST00000525495 TM4SF1P30408 202 aa15.58■□□□□ 0.08
CDC27-202ENST00000525495 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
CDC27-202ENST00000525495 C10orf71Q711Q0 1435 aa15.58■□□□□ 0.08
CDC27-202ENST00000525495 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
CDC27-202ENST00000525495 TBC1D2BQ9UPU7 963 aa15.58■□□□□ 0.08
CDC27-202ENST00000525495 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
CDC27-202ENST00000525495 BCORQ6W2J9 1755 aa15.57■□□□□ 0.08
CDC27-202ENST00000525495 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
CDC27-202ENST00000525495 N4BP2Q86UW6 1770 aaPredicted RBP15.57■□□□□ 0.08
CDC27-202ENST00000525495 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
CDC27-202ENST00000525495 NFIXQ14938 502 aa15.56■□□□□ 0.08
CDC27-202ENST00000525495 NRXN2Q9P2S2 1712 aa15.55■□□□□ 0.08
CDC27-202ENST00000525495 A0A087WZG4 1122 aa15.55■□□□□ 0.08
CDC27-202ENST00000525495 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
CDC27-202ENST00000525495 GPR162Q16538 588 aa15.55■□□□□ 0.08
CDC27-202ENST00000525495 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
CDC27-202ENST00000525495 PXDNLA1KZ92 1463 aa15.55■□□□□ 0.08
CDC27-202ENST00000525495 CHL1O00533 1208 aa15.54■□□□□ 0.08
CDC27-202ENST00000525495 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
CDC27-202ENST00000525495 YBX3P16989 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDC27-202ENST00000525495 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
CDC27-202ENST00000525495 WWC3Q9ULE0 1092 aa15.54■□□□□ 0.08
CDC27-202ENST00000525495 DZIP3Q86Y13 1208 aaKnown RBP15.53■□□□□ 0.08
CDC27-202ENST00000525495 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
CDC27-202ENST00000525495 KRT24Q2M2I5 525 aa15.52■□□□□ 0.08
CDC27-202ENST00000525495 TBC1D9BQ66K14 1250 aa15.52■□□□□ 0.08
CDC27-202ENST00000525495 BICDL1Q6ZP65 573 aa15.52■□□□□ 0.08
CDC27-202ENST00000525495 BRCA1P38398 1863 aaKnown RBP15.52■□□□□ 0.08
CDC27-202ENST00000525495 CHD4Q14839 1912 aa15.52■□□□□ 0.08
CDC27-202ENST00000525495 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.07
CDC27-202ENST00000525495 A0A0G2JLW4 131 aa15.51■□□□□ 0.07
CDC27-202ENST00000525495 SERPINB2P05120 415 aa15.51■□□□□ 0.07
CDC27-202ENST00000525495 TGFB2P61812 414 aa15.51■□□□□ 0.07
CDC27-202ENST00000525495 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms