RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SCHIP1Q9P0W5 487 aaPredicted RBP8.11□□□□□ -1.11
USP47-206ENST00000525367 H3BRB1 525 aa8.1□□□□□ -1.11
USP47-206ENST00000525367 PTGIRP43119 386 aa8.1□□□□□ -1.11
USP47-206ENST00000525367 MTFR1Q15390 333 aa8.1□□□□□ -1.11
USP47-206ENST00000525367 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
USP47-206ENST00000525367 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
USP47-206ENST00000525367 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
USP47-206ENST00000525367 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
USP47-206ENST00000525367 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
USP47-206ENST00000525367 PPP1R12BO60237 982 aaPredicted RBP8.09□□□□□ -1.11
USP47-206ENST00000525367 CLN3Q13286 438 aa8.09□□□□□ -1.11
USP47-206ENST00000525367 NOM1Q5C9Z4 860 aaKnown RBP8.09□□□□□ -1.11
USP47-206ENST00000525367 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
USP47-206ENST00000525367 SAP130Q9H0E3 1048 aa8.09□□□□□ -1.11
USP47-206ENST00000525367 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 FOXO3O43524 673 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 CENPCQ03188 943 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 ECM1Q16610 540 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 ZDHHC1Q8WTX9 485 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 KIFC2Q96AC6 838 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
USP47-206ENST00000525367 PARP3Q9Y6F1 533 aa8.08□□□□□ -1.12
USP47-206ENST00000525367 ZNF295-AS1Q8N0V1 137 aa8.07□□□□□ -1.12
USP47-206ENST00000525367 ICMTO60725 284 aa8.06□□□□□ -1.12
USP47-206ENST00000525367 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
USP47-206ENST00000525367 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
USP47-206ENST00000525367 C2orf49Q9BVC5 232 aaPredicted RBP8.06□□□□□ -1.12
USP47-206ENST00000525367 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
USP47-206ENST00000525367 NGLY1Q96IV0 654 aa8.05□□□□□ -1.12
USP47-206ENST00000525367 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
USP47-206ENST00000525367 EGFL7Q9UHF1 273 aa8.05□□□□□ -1.12
USP47-206ENST00000525367 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
USP47-206ENST00000525367 PTCD1O75127 700 aaKnown RBP8.04□□□□□ -1.12
USP47-206ENST00000525367 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
USP47-206ENST00000525367 FAM26DQ5JW98 314 aa8.04□□□□□ -1.12
USP47-206ENST00000525367 DNAJC14Q6Y2X3 702 aaPredicted RBP8.04□□□□□ -1.12
USP47-206ENST00000525367 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
USP47-206ENST00000525367 NLRP3Q96P20 1036 aa8.04□□□□□ -1.12
USP47-206ENST00000525367 EML1O00423 815 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 CAPN5O15484 640 aaPredicted RBP8.03□□□□□ -1.12
USP47-206ENST00000525367 CTSOP43234 321 aaPredicted RBP8.03□□□□□ -1.12
USP47-206ENST00000525367 COX20Q5RI15 118 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 HELQQ8TDG4 1101 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 VTI1AQ96AJ9 217 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
USP47-206ENST00000525367 TNFRSF10BO14763 440 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 MPSTP25325 297 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 GMPRP36959 345 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 ARHGAP4P98171 946 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 SLC16A10Q8TF71 515 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 KLRG1Q96E93 195 aa8.02□□□□□ -1.13
USP47-206ENST00000525367 ZSCAN10Q96SZ4 725 aaPredicted RBP8.02□□□□□ -1.13
USP47-206ENST00000525367 BMP1P13497 986 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 NOS2P35228 1153 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP47-206ENST00000525367 C16orf46Q6P387 395 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 PPARGC1BQ86YN6 1023 aaKnown RBP8.01□□□□□ -1.13
USP47-206ENST00000525367 NPAS3Q8IXF0 933 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 STAG2Q8N3U4 1231 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 L3MBTL2Q969R5 705 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
USP47-206ENST00000525367 NXF1Q9UBU9 619 aaKnown RBP8.01□□□□□ -1.13
USP47-206ENST00000525367 ZNF232Q9UNY5 417 aa8.01□□□□□ -1.13
USP47-206ENST00000525367 SERTM1A2A2V5 107 aa8□□□□□ -1.13
USP47-206ENST00000525367 SPINT1O43278 529 aa8□□□□□ -1.13
USP47-206ENST00000525367 TXLNAP40222 546 aa8□□□□□ -1.13
USP47-206ENST00000525367 MARSP56192 900 aaKnown RBP8□□□□□ -1.13
USP47-206ENST00000525367 TEAD4Q15561 434 aa8□□□□□ -1.13
USP47-206ENST00000525367 TMEM214Q6NUQ4 689 aaKnown RBP8□□□□□ -1.13
USP47-206ENST00000525367 GRIP2Q9C0E4 1043 aa8□□□□□ -1.13
USP47-206ENST00000525367 PHKA2P46019 1235 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 PLA2G4AP47712 749 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 SF3B2Q13435 895 aaKnown RBP7.99□□□□□ -1.13
USP47-206ENST00000525367 C4orf17Q53FE4 359 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 ALDH16A1Q8IZ83 802 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 NBPF15Q8N660 670 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 TSEN34Q9BSV6 310 aaKnown RBP7.99□□□□□ -1.13
USP47-206ENST00000525367 PHACTR1Q9C0D0 580 aa7.99□□□□□ -1.13
USP47-206ENST00000525367 ZBTB39O15060 712 aa7.98□□□□□ -1.13
USP47-206ENST00000525367 BMP2P12643 396 aa7.98□□□□□ -1.13
USP47-206ENST00000525367 MAPK1P28482 360 aa7.98□□□□□ -1.13
USP47-206ENST00000525367 RBM25P49756 843 aaKnown RBP7.98□□□□□ -1.13
USP47-206ENST00000525367 RHBDD1Q8TEB9 315 aa7.98□□□□□ -1.13
USP47-206ENST00000525367 KLK14Q9P0G3 267 aa7.98□□□□□ -1.13
USP47-206ENST00000525367 RNF144AP50876 292 aaPredicted RBP7.97□□□□□ -1.13
USP47-206ENST00000525367 HIRAP54198 1017 aaPredicted RBP7.97□□□□□ -1.13
USP47-206ENST00000525367 DGKZQ13574 1117 aa7.97□□□□□ -1.13
USP47-206ENST00000525367 SUZ12Q15022 739 aaKnown RBP7.97□□□□□ -1.13
USP47-206ENST00000525367 MRPL14Q6P1L8 145 aaKnown RBP7.97□□□□□ -1.13
USP47-206ENST00000525367 ATCAYQ86WG3 371 aa7.97□□□□□ -1.13
USP47-206ENST00000525367 RNF217Q8TC41 542 aa7.97□□□□□ -1.13
USP47-206ENST00000525367 IRF7Q92985 503 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms