RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 DCAF8L1A6NGE4 600 aa25.1■■□□□ 1.61
UBXN1-204ENST00000524762 STARD3NLO95772 234 aa25.1■■□□□ 1.61
UBXN1-204ENST00000524762 MMP10P09238 476 aa25.1■■□□□ 1.61
UBXN1-204ENST00000524762 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
UBXN1-204ENST00000524762 TAF7Q15545 349 aaPredicted RBP25.1■■□□□ 1.61
UBXN1-204ENST00000524762 CD2APQ9Y5K6 639 aa25.1■■□□□ 1.61
UBXN1-204ENST00000524762 LAMB4A4D0S4 1761 aa25.09■■□□□ 1.61
UBXN1-204ENST00000524762 THUMPD2Q9BTF0 503 aaKnown RBP25.08■■□□□ 1.61
UBXN1-204ENST00000524762 SCN7AQ01118 1682 aa25.07■■□□□ 1.6
UBXN1-204ENST00000524762 KIAA1551Q9HCM1 1747 aa25.07■■□□□ 1.6
UBXN1-204ENST00000524762 TMPOP42166 694 aaKnown RBP25.07■■□□□ 1.6
UBXN1-204ENST00000524762 CCDC146Q8IYE0 955 aa25.07■■□□□ 1.6
UBXN1-204ENST00000524762 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
UBXN1-204ENST00000524762 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
UBXN1-204ENST00000524762 RIPK4P57078 832 aa25.06■■□□□ 1.6
UBXN1-204ENST00000524762 FKBP8Q14318 412 aa25.06■■□□□ 1.6
UBXN1-204ENST00000524762 PRAMEF22A3QJZ6 481 aa25.05■■□□□ 1.6
UBXN1-204ENST00000524762 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
UBXN1-204ENST00000524762 PNISRQ8TF01 805 aaKnown RBP25.05■■□□□ 1.6
UBXN1-204ENST00000524762 RUNDC1Q96C34 613 aa25.05■■□□□ 1.6
UBXN1-204ENST00000524762 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
UBXN1-204ENST00000524762 C10orf71Q711Q0 1435 aa25.04■■□□□ 1.6
UBXN1-204ENST00000524762 USPL1Q5W0Q7 1092 aa25.04■■□□□ 1.6
UBXN1-204ENST00000524762 NARFQ9UHQ1 456 aa25.04■■□□□ 1.6
UBXN1-204ENST00000524762 USP16Q9Y5T5 823 aa25.04■■□□□ 1.6
UBXN1-204ENST00000524762 ZPR1O75312 459 aa25.03■■□□□ 1.6
UBXN1-204ENST00000524762 SNRPA1P09661 255 aaKnown RBP25.03■■□□□ 1.6
UBXN1-204ENST00000524762 BCORQ6W2J9 1755 aa25.03■■□□□ 1.6
UBXN1-204ENST00000524762 A1BGP04217 495 aa25.02■■□□□ 1.6
UBXN1-204ENST00000524762 IL6STP40189 918 aaPredicted RBP25.01■■□□□ 1.59
UBXN1-204ENST00000524762 DDR1Q08345 913 aa25.01■■□□□ 1.59
UBXN1-204ENST00000524762 LMOD3Q0VAK6 560 aa25.01■■□□□ 1.59
UBXN1-204ENST00000524762 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
UBXN1-204ENST00000524762 RRP7AQ9Y3A4 280 aaKnown RBP25.01■■□□□ 1.59
UBXN1-204ENST00000524762 PARP3Q9Y6F1 533 aa25.01■■□□□ 1.59
UBXN1-204ENST00000524762 NRXN2Q9P2S2 1712 aa25■■□□□ 1.59
UBXN1-204ENST00000524762 A0A087WZG4 1122 aa24.99■■□□□ 1.59
UBXN1-204ENST00000524762 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
UBXN1-204ENST00000524762 TM4SF1P30408 202 aa24.99■■□□□ 1.59
UBXN1-204ENST00000524762 AFDNP55196 1824 aaKnown RBP24.99■■□□□ 1.59
UBXN1-204ENST00000524762 GPR162Q16538 588 aa24.99■■□□□ 1.59
UBXN1-204ENST00000524762 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
UBXN1-204ENST00000524762 N4BP2Q86UW6 1770 aaPredicted RBP24.99■■□□□ 1.59
UBXN1-204ENST00000524762 CHD4Q14839 1912 aa24.98■■□□□ 1.59
UBXN1-204ENST00000524762 EIF4A1P60842 406 aaKnown RBP24.98■■□□□ 1.59
UBXN1-204ENST00000524762 UTRNP46939 3433 aa24.98■■□□□ 1.59
UBXN1-204ENST00000524762 POLRMTO00411 1230 aaKnown RBP24.97■■□□□ 1.59
UBXN1-204ENST00000524762 YBX3P16989 372 aaKnown RBP eCLIP24.97■■□□□ 1.59
UBXN1-204ENST00000524762 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
UBXN1-204ENST00000524762 NEUROD2Q15784 382 aa24.96■■□□□ 1.59
UBXN1-204ENST00000524762 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
UBXN1-204ENST00000524762 GIGYF1O75420 1035 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-204ENST00000524762 PIP4K2AP48426 406 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-204ENST00000524762 NFIXQ14938 502 aa24.95■■□□□ 1.58
UBXN1-204ENST00000524762 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
UBXN1-204ENST00000524762 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-204ENST00000524762 BRCA1P38398 1863 aaKnown RBP24.95■■□□□ 1.58
UBXN1-204ENST00000524762 ANP32CO43423 234 aa24.94■■□□□ 1.58
UBXN1-204ENST00000524762 TSPYL4Q9UJ04 414 aa24.94■■□□□ 1.58
UBXN1-204ENST00000524762 GOLGB1Q14789 3259 aaKnown RBP24.93■■□□□ 1.58
UBXN1-204ENST00000524762 NBPF26B4DH59 902 aa24.93■■□□□ 1.58
UBXN1-204ENST00000524762 YY1P25490 414 aa24.93■■□□□ 1.58
UBXN1-204ENST00000524762 NBPF10Q6P3W6 841 aaKnown RBP24.93■■□□□ 1.58
UBXN1-204ENST00000524762 NBPF15Q8N660 670 aa24.93■■□□□ 1.58
UBXN1-204ENST00000524762 TBC1D2BQ9UPU7 963 aa24.93■■□□□ 1.58
UBXN1-204ENST00000524762 CAMTA2O94983 1202 aa24.92■■□□□ 1.58
UBXN1-204ENST00000524762 TGFB2P61812 414 aa24.92■■□□□ 1.58
UBXN1-204ENST00000524762 DZIP3Q86Y13 1208 aaKnown RBP24.9■■□□□ 1.58
UBXN1-204ENST00000524762 APAF1O14727 1248 aa24.89■■□□□ 1.58
UBXN1-204ENST00000524762 TBC1D9BQ66K14 1250 aa24.89■■□□□ 1.58
UBXN1-204ENST00000524762 NPM2Q86SE8 214 aaKnown RBP24.89■■□□□ 1.58
UBXN1-204ENST00000524762 CHL1O00533 1208 aa24.88■■□□□ 1.57
UBXN1-204ENST00000524762 GRIN3BO60391 1043 aa24.88■■□□□ 1.57
UBXN1-204ENST00000524762 A0A0G2JLW4 131 aa24.87■■□□□ 1.57
UBXN1-204ENST00000524762 SERPINB2P05120 415 aa24.87■■□□□ 1.57
UBXN1-204ENST00000524762 DPEP1P16444 411 aa24.87■■□□□ 1.57
UBXN1-204ENST00000524762 DLEC1Q9Y238 1755 aa24.86■■□□□ 1.57
UBXN1-204ENST00000524762 BICDL1Q6ZP65 573 aa24.86■■□□□ 1.57
UBXN1-204ENST00000524762 WWC3Q9ULE0 1092 aa24.86■■□□□ 1.57
UBXN1-204ENST00000524762 ANKRD31Q8N7Z5 1873 aa24.85■■□□□ 1.57
UBXN1-204ENST00000524762 CARMIL3Q8ND23 1372 aa24.85■■□□□ 1.57
UBXN1-204ENST00000524762 KCNA3P22001 575 aa24.85■■□□□ 1.57
UBXN1-204ENST00000524762 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
UBXN1-204ENST00000524762 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
UBXN1-204ENST00000524762 ERBB4Q15303 1308 aa24.84■■□□□ 1.57
UBXN1-204ENST00000524762 RGL2O15211 777 aa24.83■■□□□ 1.57
UBXN1-204ENST00000524762 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
UBXN1-204ENST00000524762 LAS1LQ9Y4W2 734 aaKnown RBP24.82■■□□□ 1.56
UBXN1-204ENST00000524762 CFAP44Q96MT7 982 aa24.81■■□□□ 1.56
UBXN1-204ENST00000524762 NUP98P52948 1817 aa24.8■■□□□ 1.56
UBXN1-204ENST00000524762 ZNF853P0CG23 659 aa24.8■■□□□ 1.56
UBXN1-204ENST00000524762 CHRNA5P30532 468 aa24.8■■□□□ 1.56
UBXN1-204ENST00000524762 KRT24Q2M2I5 525 aa24.8■■□□□ 1.56
UBXN1-204ENST00000524762 ZNF652Q9Y2D9 606 aa24.8■■□□□ 1.56
UBXN1-204ENST00000524762 COL11A2P13942 1736 aaPredicted RBP24.79■■□□□ 1.56
UBXN1-204ENST00000524762 LRP10Q7Z4F1 713 aa24.79■■□□□ 1.56
UBXN1-204ENST00000524762 SETDB2Q96T68 719 aa24.79■■□□□ 1.56
UBXN1-204ENST00000524762 MYL6BP14649 208 aa24.78■■□□□ 1.56
UBXN1-204ENST00000524762 PDIA6Q15084 440 aa24.78■■□□□ 1.56
UBXN1-204ENST00000524762 PRR5LQ6MZQ0 368 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms