RNA–Protein interactions for RNA: ENST00000524661.5

PGAP2-228, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3

Gene PGAP2, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-228ENST00000524661 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
PGAP2-228ENST00000524661 GPR162Q16538 588 aa11.96□□□□□ -0.49
PGAP2-228ENST00000524661 C20orf194Q5TEA3 1177 aa11.96□□□□□ -0.49
PGAP2-228ENST00000524661 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.49
PGAP2-228ENST00000524661 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 PKD1L3Q7Z443 1732 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 SHANK3Q9BYB0 1731 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
PGAP2-228ENST00000524661 BRPF1P55201 1214 aaPredicted RBP11.95□□□□□ -0.5
PGAP2-228ENST00000524661 CABP4P57796 275 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 PDE3AQ14432 1141 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
PGAP2-228ENST00000524661 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
PGAP2-228ENST00000524661 CRBNQ96SW2 442 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
PGAP2-228ENST00000524661 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
PGAP2-228ENST00000524661 MS4A1P11836 297 aa11.94□□□□□ -0.5
PGAP2-228ENST00000524661 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
PGAP2-228ENST00000524661 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
PGAP2-228ENST00000524661 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
PGAP2-228ENST00000524661 EXOC6Q8TAG9 804 aa11.94□□□□□ -0.5
PGAP2-228ENST00000524661 TCERG1O14776 1098 aaKnown RBP11.93□□□□□ -0.5
PGAP2-228ENST00000524661 KCNQ3O43525 872 aa11.93□□□□□ -0.5
PGAP2-228ENST00000524661 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
PGAP2-228ENST00000524661 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
PGAP2-228ENST00000524661 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 MRC1P22897 1456 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 HOXB7P09629 217 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 ATF7IPQ6VMQ6 1270 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
PGAP2-228ENST00000524661 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
PGAP2-228ENST00000524661 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
PGAP2-228ENST00000524661 TRIM27P14373 513 aa11.91□□□□□ -0.5
PGAP2-228ENST00000524661 CCDC30Q5VVM6 783 aa11.91□□□□□ -0.5
PGAP2-228ENST00000524661 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
PGAP2-228ENST00000524661 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
PGAP2-228ENST00000524661 TTC5Q8N0Z6 440 aa11.91□□□□□ -0.5
PGAP2-228ENST00000524661 ARHGAP45Q92619 1136 aa11.91□□□□□ -0.5
PGAP2-228ENST00000524661 STK31Q9BXU1 1019 aa11.91□□□□□ -0.5
PGAP2-228ENST00000524661 GRIN3BO60391 1043 aa11.9□□□□□ -0.5
PGAP2-228ENST00000524661 SLC39A6Q13433 755 aa11.9□□□□□ -0.5
PGAP2-228ENST00000524661 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
PGAP2-228ENST00000524661 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
PGAP2-228ENST00000524661 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
PGAP2-228ENST00000524661 TNNQ9UQP3 1299 aa11.9□□□□□ -0.5
PGAP2-228ENST00000524661 C5P01031 1676 aa11.9□□□□□ -0.5
PGAP2-228ENST00000524661 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
PGAP2-228ENST00000524661 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
PGAP2-228ENST00000524661 RLBP1P12271 317 aa11.89□□□□□ -0.51
PGAP2-228ENST00000524661 KCNQ4P56696 695 aa11.89□□□□□ -0.51
PGAP2-228ENST00000524661 PELP1Q8IZL8 1130 aaKnown RBP11.89□□□□□ -0.51
PGAP2-228ENST00000524661 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
PGAP2-228ENST00000524661 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
PGAP2-228ENST00000524661 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
PGAP2-228ENST00000524661 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
PGAP2-228ENST00000524661 MSH5O43196 834 aa11.88□□□□□ -0.51
PGAP2-228ENST00000524661 EIF2S2P20042 333 aaKnown RBP11.88□□□□□ -0.51
PGAP2-228ENST00000524661 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
PGAP2-228ENST00000524661 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
PGAP2-228ENST00000524661 CCDC136Q96JN2 1154 aa11.88□□□□□ -0.51
PGAP2-228ENST00000524661 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
PGAP2-228ENST00000524661 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
PGAP2-228ENST00000524661 PTPRCP08575 1304 aa11.87□□□□□ -0.51
PGAP2-228ENST00000524661 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
PGAP2-228ENST00000524661 B4GALNT3Q6L9W6 998 aa11.87□□□□□ -0.51
PGAP2-228ENST00000524661 NLGN2Q8NFZ4 835 aa11.87□□□□□ -0.51
PGAP2-228ENST00000524661 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
PGAP2-228ENST00000524661 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
PGAP2-228ENST00000524661 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 TMEM57Q8N5G2 664 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 ITGB4P16144 1822 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 ABCC4O15439 1325 aa11.86□□□□□ -0.51
PGAP2-228ENST00000524661 AAMPQ13685 434 aa11.85□□□□□ -0.51
PGAP2-228ENST00000524661 PIGBQ92521 554 aa11.85□□□□□ -0.51
PGAP2-228ENST00000524661 SMARCC1Q92922 1105 aaPredicted RBP11.85□□□□□ -0.51
PGAP2-228ENST00000524661 PALLDQ8WX93 1383 aa11.84□□□□□ -0.51
PGAP2-228ENST00000524661 PRAMEF22A3QJZ6 481 aa11.84□□□□□ -0.51
PGAP2-228ENST00000524661 FLIIQ13045 1269 aa11.84□□□□□ -0.51
PGAP2-228ENST00000524661 G2E3Q7L622 706 aa11.84□□□□□ -0.51
PGAP2-228ENST00000524661 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
PGAP2-228ENST00000524661 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
PGAP2-228ENST00000524661 DDX19BQ9UMR2 479 aa11.84□□□□□ -0.51
PGAP2-228ENST00000524661 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
PGAP2-228ENST00000524661 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
PGAP2-228ENST00000524661 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
PGAP2-228ENST00000524661 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
PGAP2-228ENST00000524661 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
PGAP2-228ENST00000524661 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
PGAP2-228ENST00000524661 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
PGAP2-228ENST00000524661 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
PGAP2-228ENST00000524661 ASAP1Q9ULH1 1129 aa11.82□□□□□ -0.52
PGAP2-228ENST00000524661 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
PGAP2-228ENST00000524661 UBR3Q6ZT12 1888 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms