RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 MYH16Q9H6N6 1097 aa10.12□□□□□ -0.79
NPAS4-202ENST00000524617 ANO8Q9HCE9 1232 aaPredicted RBP10.12□□□□□ -0.79
NPAS4-202ENST00000524617 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
NPAS4-202ENST00000524617 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
NPAS4-202ENST00000524617 KCNQ4P56696 695 aa10.11□□□□□ -0.79
NPAS4-202ENST00000524617 ZNF827Q17R98 1081 aa10.11□□□□□ -0.79
NPAS4-202ENST00000524617 TSR2Q969E8 191 aaKnown RBP10.11□□□□□ -0.79
NPAS4-202ENST00000524617 LAS1LQ9Y4W2 734 aaKnown RBP10.11□□□□□ -0.79
NPAS4-202ENST00000524617 UBR3Q6ZT12 1888 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 TUBGCP6Q96RT7 1819 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 KAT6BQ8WYB5 2073 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 CRKLP46109 303 aaKnown RBP10.1□□□□□ -0.79
NPAS4-202ENST00000524617 SLC15A2Q16348 729 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 KRT24Q2M2I5 525 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 DUSP27Q5VZP5 1158 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 INTS5Q6P9B9 1019 aaKnown RBP10.1□□□□□ -0.79
NPAS4-202ENST00000524617 USP16Q9Y5T5 823 aa10.1□□□□□ -0.79
NPAS4-202ENST00000524617 CASZ1Q86V15 1759 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 STARD3NLO95772 234 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 ADRA2BP18089 450 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 SSFA2P28290 1259 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 C8orf58Q8NAV2 365 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 CDCA7LQ96GN5 454 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 ZBTB1Q9Y2K1 713 aa10.09□□□□□ -0.79
NPAS4-202ENST00000524617 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
NPAS4-202ENST00000524617 RPS6KA4O75676 772 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 NBPF14Q5TI25 921 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 LRP10Q7Z4F1 713 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 AMIGO3Q86WK7 504 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 TSPYL6Q8N831 410 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 AK7Q96M32 723 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 STK32BQ9NY57 414 aa10.08□□□□□ -0.8
NPAS4-202ENST00000524617 PNPLA7Q6ZV29 1317 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 SCN7AQ01118 1682 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 COL15A1P39059 1388 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 GNPATO15228 680 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 CT47B1P0C2W7 299 aaPredicted RBP10.07□□□□□ -0.8
NPAS4-202ENST00000524617 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
NPAS4-202ENST00000524617 EIF5P55010 431 aaKnown RBP10.07□□□□□ -0.8
NPAS4-202ENST00000524617 EXOSC9Q06265 439 aaKnown RBP10.07□□□□□ -0.8
NPAS4-202ENST00000524617 PDIA6Q15084 440 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 TWISTNBQ3B726 338 aaPredicted RBP10.07□□□□□ -0.8
NPAS4-202ENST00000524617 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
NPAS4-202ENST00000524617 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 CHMP4AQ9BY43 222 aa10.07□□□□□ -0.8
NPAS4-202ENST00000524617 RGL2O15211 777 aa10.06□□□□□ -0.8
NPAS4-202ENST00000524617 VAMP4O75379 141 aa10.06□□□□□ -0.8
NPAS4-202ENST00000524617 A1BGP04217 495 aa10.06□□□□□ -0.8
NPAS4-202ENST00000524617 HDGFL1Q5TGJ6 251 aa10.06□□□□□ -0.8
NPAS4-202ENST00000524617 FLAD1Q8NFF5 587 aa10.06□□□□□ -0.8
NPAS4-202ENST00000524617 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
NPAS4-202ENST00000524617 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
NPAS4-202ENST00000524617 COL24A1Q17RW2 1714 aa10.05□□□□□ -0.8
NPAS4-202ENST00000524617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
NPAS4-202ENST00000524617 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
NPAS4-202ENST00000524617 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
NPAS4-202ENST00000524617 BCORQ6W2J9 1755 aa10.05□□□□□ -0.8
NPAS4-202ENST00000524617 PROSER3Q2NL68 480 aa10.04□□□□□ -0.8
NPAS4-202ENST00000524617 CCDC30Q5VVM6 783 aa10.04□□□□□ -0.8
NPAS4-202ENST00000524617 CHPF2Q9P2E5 772 aa10.04□□□□□ -0.8
NPAS4-202ENST00000524617 DBF4Q9UBU7 674 aaPredicted RBP10.04□□□□□ -0.8
NPAS4-202ENST00000524617 USP42Q9H9J4 1324 aaKnown RBP10.04□□□□□ -0.8
NPAS4-202ENST00000524617 A0A087WZG4 1122 aa10.03□□□□□ -0.8
NPAS4-202ENST00000524617 ELL2O00472 640 aaPredicted RBP10.03□□□□□ -0.8
NPAS4-202ENST00000524617 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
NPAS4-202ENST00000524617 CANXP27824 592 aaKnown RBP10.03□□□□□ -0.8
NPAS4-202ENST00000524617 R3HDM1Q15032 1099 aaKnown RBP10.03□□□□□ -0.8
NPAS4-202ENST00000524617 COL23A1Q86Y22 540 aaPredicted RBP10.03□□□□□ -0.8
NPAS4-202ENST00000524617 SLC16A10Q8TF71 515 aa10.03□□□□□ -0.8
NPAS4-202ENST00000524617 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
NPAS4-202ENST00000524617 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
NPAS4-202ENST00000524617 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
NPAS4-202ENST00000524617 ALDH1L2Q3SY69 923 aa10.02□□□□□ -0.81
NPAS4-202ENST00000524617 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
NPAS4-202ENST00000524617 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
NPAS4-202ENST00000524617 NARFQ9UHQ1 456 aa10.02□□□□□ -0.81
NPAS4-202ENST00000524617 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
NPAS4-202ENST00000524617 ERVV-1B6SEH8 477 aa10.01□□□□□ -0.81
NPAS4-202ENST00000524617 PHF14O94880 888 aa10.01□□□□□ -0.81
NPAS4-202ENST00000524617 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
NPAS4-202ENST00000524617 SMIM5Q71RC9 77 aa10.01□□□□□ -0.81
NPAS4-202ENST00000524617 PDGFDQ9GZP0 370 aaPredicted RBP10.01□□□□□ -0.81
NPAS4-202ENST00000524617 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
NPAS4-202ENST00000524617 ANXA1P04083 346 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 GYS1P13807 737 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 MYL6BP14649 208 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 RFC4P35249 363 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 CLEC4GQ6UXB4 293 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
NPAS4-202ENST00000524617 NECTIN2Q92692 538 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 STK31Q9BXU1 1019 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 MAP3K15Q6ZN16 1313 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 LRP5O75197 1615 aa10□□□□□ -0.81
NPAS4-202ENST00000524617 PSDA5PKW4 1024 aaPredicted RBP9.99□□□□□ -0.81
NPAS4-202ENST00000524617 RARSP54136 660 aaKnown RBP9.99□□□□□ -0.81
NPAS4-202ENST00000524617 USPL1Q5W0Q7 1092 aa9.99□□□□□ -0.81
NPAS4-202ENST00000524617 TTLL7Q6ZT98 887 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms