RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 LAMB4A4D0S4 1761 aa8.77□□□□□ -1.01
NUP98-213ENST00000524563 GYS1P13807 737 aa8.77□□□□□ -1.01
NUP98-213ENST00000524563 APLP1P51693 650 aa8.77□□□□□ -1.01
NUP98-213ENST00000524563 DALRD3Q5D0E6 543 aaKnown RBP8.77□□□□□ -1.01
NUP98-213ENST00000524563 RC3H1Q5TC82 1133 aaKnown RBP8.77□□□□□ -1.01
NUP98-213ENST00000524563 RNF181Q9P0P0 153 aa8.77□□□□□ -1.01
NUP98-213ENST00000524563 KDM2BQ8NHM5 1336 aa8.77□□□□□ -1.01
NUP98-213ENST00000524563 FER1L6Q2WGJ9 1857 aa8.77□□□□□ -1.01
NUP98-213ENST00000524563 KIF3CO14782 793 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 NPHP1O15259 732 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 PPP2R1AP30153 589 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 IL13P35225 146 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 C9orf131Q5VYM1 1079 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 PIM2Q9P1W9 311 aa8.76□□□□□ -1.01
NUP98-213ENST00000524563 HMOX1P09601 288 aa8.75□□□□□ -1.01
NUP98-213ENST00000524563 TTC5Q8N0Z6 440 aa8.75□□□□□ -1.01
NUP98-213ENST00000524563 NFATC2IPQ8NCF5 419 aa8.75□□□□□ -1.01
NUP98-213ENST00000524563 SLC4A9Q96Q91 983 aa8.75□□□□□ -1.01
NUP98-213ENST00000524563 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
NUP98-213ENST00000524563 ZNF330Q9Y3S2 320 aaPredicted RBP8.75□□□□□ -1.01
NUP98-213ENST00000524563 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
NUP98-213ENST00000524563 TOMM70O94826 608 aa8.74□□□□□ -1.01
NUP98-213ENST00000524563 CHRNA5P30532 468 aa8.74□□□□□ -1.01
NUP98-213ENST00000524563 DDR1Q08345 913 aa8.74□□□□□ -1.01
NUP98-213ENST00000524563 FKBP8Q14318 412 aa8.74□□□□□ -1.01
NUP98-213ENST00000524563 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
NUP98-213ENST00000524563 NPM2Q86SE8 214 aaKnown RBP8.74□□□□□ -1.01
NUP98-213ENST00000524563 DNAJC10Q8IXB1 793 aa8.74□□□□□ -1.01
NUP98-213ENST00000524563 RASSF7Q02833 373 aa8.73□□□□□ -1.01
NUP98-213ENST00000524563 USPL1Q5W0Q7 1092 aa8.73□□□□□ -1.01
NUP98-213ENST00000524563 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
NUP98-213ENST00000524563 SOS1Q07889 1333 aaPredicted RBP8.73□□□□□ -1.01
NUP98-213ENST00000524563 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
NUP98-213ENST00000524563 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
NUP98-213ENST00000524563 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
NUP98-213ENST00000524563 ZBTB1Q9Y2K1 713 aa8.72□□□□□ -1.01
NUP98-213ENST00000524563 SLX4Q8IY92 1834 aa8.72□□□□□ -1.01
NUP98-213ENST00000524563 POLRMTO00411 1230 aaKnown RBP8.71□□□□□ -1.02
NUP98-213ENST00000524563 U2SURPO15042 1029 aaKnown RBP8.71□□□□□ -1.02
NUP98-213ENST00000524563 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
NUP98-213ENST00000524563 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.02
NUP98-213ENST00000524563 TEFQ10587 303 aa8.71□□□□□ -1.02
NUP98-213ENST00000524563 RALBP1Q15311 655 aa8.71□□□□□ -1.02
NUP98-213ENST00000524563 SCN4AP35499 1836 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 NUP98P52948 1817 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 C2CD5Q86YS7 1000 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 MIER1Q8N108 512 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 CFAP53Q96M91 514 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 PRKRIP1Q9H875 184 aaPredicted RBP8.7□□□□□ -1.02
NUP98-213ENST00000524563 MYBBP1AQ9BQG0 1328 aaKnown RBP8.7□□□□□ -1.02
NUP98-213ENST00000524563 KDM3BQ7LBC6 1761 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 CARMIL3Q8ND23 1372 aa8.7□□□□□ -1.02
NUP98-213ENST00000524563 A0A087WZG4 1122 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 STARD3NLO95772 234 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 LMNB1P20700 586 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 FSTL1Q12841 308 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 NFIXQ14938 502 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 INTS5Q6P9B9 1019 aaKnown RBP8.69□□□□□ -1.02
NUP98-213ENST00000524563 SMC1BQ8NDV3 1235 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 ZNF219Q9P2Y4 722 aaPredicted RBP8.69□□□□□ -1.02
NUP98-213ENST00000524563 NARFQ9UHQ1 456 aa8.69□□□□□ -1.02
NUP98-213ENST00000524563 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
NUP98-213ENST00000524563 H0YIN7 160 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 SERPINB2P05120 415 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
NUP98-213ENST00000524563 KCNA4P22459 653 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 ST5P78524 1137 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 HTRA3P83110 453 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 ZNF622Q969S3 477 aaKnown RBP eCLIP8.68□□□□□ -1.02
NUP98-213ENST00000524563 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 RRAGCQ9HB90 399 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 LGR6Q9HBX8 967 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 GTF3C3Q9Y5Q9 886 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 HEG1Q9ULI3 1381 aa8.68□□□□□ -1.02
NUP98-213ENST00000524563 CAPN15O75808 1086 aa8.67□□□□□ -1.02
NUP98-213ENST00000524563 KCNA3P22001 575 aa8.67□□□□□ -1.02
NUP98-213ENST00000524563 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
NUP98-213ENST00000524563 ANKRD36CQ5JPF3 1778 aa8.67□□□□□ -1.02
NUP98-213ENST00000524563 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
NUP98-213ENST00000524563 KLRG1Q96E93 195 aa8.67□□□□□ -1.02
NUP98-213ENST00000524563 TRPM7Q96QT4 1865 aa8.67□□□□□ -1.02
NUP98-213ENST00000524563 GNAT3A8MTJ3 354 aa8.66□□□□□ -1.02
NUP98-213ENST00000524563 U2AF1L5P0DN76 240 aaPredicted RBP8.66□□□□□ -1.02
NUP98-213ENST00000524563 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
NUP98-213ENST00000524563 U2AF1Q01081 240 aaKnown RBP eCLIP8.66□□□□□ -1.02
NUP98-213ENST00000524563 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
NUP98-213ENST00000524563 PHACTR3Q96KR7 559 aa8.66□□□□□ -1.02
NUP98-213ENST00000524563 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
NUP98-213ENST00000524563 NUDCQ9Y266 331 aa8.66□□□□□ -1.02
NUP98-213ENST00000524563 TM4SF1P30408 202 aa8.65□□□□□ -1.02
NUP98-213ENST00000524563 PDE6BP35913 854 aa8.65□□□□□ -1.02
NUP98-213ENST00000524563 CCDC24Q8N4L8 307 aa8.65□□□□□ -1.02
NUP98-213ENST00000524563 YTHDC1Q96MU7 727 aaKnown RBP8.65□□□□□ -1.02
NUP98-213ENST00000524563 TAOK3Q9H2K8 898 aa8.65□□□□□ -1.02
NUP98-213ENST00000524563 ZNF652Q9Y2D9 606 aa8.65□□□□□ -1.02
NUP98-213ENST00000524563 C21orf2O43822 256 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 NEFMP07197 916 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms