RNA–Protein interactions for RNA: ENST00000524347.2

SGCD-204, Transcript of sarcoglycan delta, humanhuman

TSL 5

Gene SGCD, Length 739 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-204ENST00000524347 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
SGCD-204ENST00000524347 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
SGCD-204ENST00000524347 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
SGCD-204ENST00000524347 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
SGCD-204ENST00000524347 SSFA2P28290 1259 aa16.74■□□□□ 0.27
SGCD-204ENST00000524347 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
SGCD-204ENST00000524347 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
SGCD-204ENST00000524347 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SGCD-204ENST00000524347 MCM10Q7L590 875 aa16.73■□□□□ 0.27
SGCD-204ENST00000524347 FLAD1Q8NFF5 587 aa16.73■□□□□ 0.27
SGCD-204ENST00000524347 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
SGCD-204ENST00000524347 CNTNAP4Q9C0A0 1308 aa16.71■□□□□ 0.27
SGCD-204ENST00000524347 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
SGCD-204ENST00000524347 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.27
SGCD-204ENST00000524347 IL17REQ8NFR9 667 aa16.71■□□□□ 0.27
SGCD-204ENST00000524347 YY1P25490 414 aa16.7■□□□□ 0.26
SGCD-204ENST00000524347 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
SGCD-204ENST00000524347 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
SGCD-204ENST00000524347 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
SGCD-204ENST00000524347 RTCBQ9Y3I0 505 aaKnown RBP16.7■□□□□ 0.26
SGCD-204ENST00000524347 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
SGCD-204ENST00000524347 CHD4Q14839 1912 aa16.69■□□□□ 0.26
SGCD-204ENST00000524347 ARHGEF1Q92888 912 aaKnown RBP16.69■□□□□ 0.26
SGCD-204ENST00000524347 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
SGCD-204ENST00000524347 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
SGCD-204ENST00000524347 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
SGCD-204ENST00000524347 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
SGCD-204ENST00000524347 RPS6KA4O75676 772 aa16.68■□□□□ 0.26
SGCD-204ENST00000524347 GNAI1P63096 354 aa16.68■□□□□ 0.26
SGCD-204ENST00000524347 RC3H1Q5TC82 1133 aaKnown RBP16.68■□□□□ 0.26
SGCD-204ENST00000524347 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
SGCD-204ENST00000524347 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
SGCD-204ENST00000524347 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
SGCD-204ENST00000524347 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
SGCD-204ENST00000524347 YBX3P16989 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
SGCD-204ENST00000524347 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
SGCD-204ENST00000524347 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
SGCD-204ENST00000524347 CHL1O00533 1208 aa16.66■□□□□ 0.26
SGCD-204ENST00000524347 KCNQ3O43525 872 aa16.66■□□□□ 0.26
SGCD-204ENST00000524347 MMP10P09238 476 aa16.66■□□□□ 0.26
SGCD-204ENST00000524347 GPR162Q16538 588 aa16.66■□□□□ 0.26
SGCD-204ENST00000524347 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
SGCD-204ENST00000524347 GYS1P13807 737 aa16.65■□□□□ 0.26
SGCD-204ENST00000524347 HMGB2P26583 209 aaKnown RBP16.65■□□□□ 0.26
SGCD-204ENST00000524347 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.25
SGCD-204ENST00000524347 RFC4P35249 363 aa16.64■□□□□ 0.25
SGCD-204ENST00000524347 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
SGCD-204ENST00000524347 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
SGCD-204ENST00000524347 TEFQ10587 303 aa16.63■□□□□ 0.25
SGCD-204ENST00000524347 ZNF496Q96IT1 587 aaPredicted RBP16.63■□□□□ 0.25
SGCD-204ENST00000524347 CCDC87Q9NVE4 849 aa16.63■□□□□ 0.25
SGCD-204ENST00000524347 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
SGCD-204ENST00000524347 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
SGCD-204ENST00000524347 KIF13BQ9NQT8 1826 aa16.63■□□□□ 0.25
SGCD-204ENST00000524347 CT47B1P0C2W7 299 aaPredicted RBP16.62■□□□□ 0.25
SGCD-204ENST00000524347 ADRA2BP18089 450 aa16.62■□□□□ 0.25
SGCD-204ENST00000524347 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
SGCD-204ENST00000524347 FKBP8Q14318 412 aa16.62■□□□□ 0.25
SGCD-204ENST00000524347 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
SGCD-204ENST00000524347 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
SGCD-204ENST00000524347 USP42Q9H9J4 1324 aaKnown RBP16.62■□□□□ 0.25
SGCD-204ENST00000524347 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
SGCD-204ENST00000524347 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
SGCD-204ENST00000524347 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
SGCD-204ENST00000524347 COL15A1P39059 1388 aa16.6■□□□□ 0.25
SGCD-204ENST00000524347 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
SGCD-204ENST00000524347 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
SGCD-204ENST00000524347 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
SGCD-204ENST00000524347 DDR1Q08345 913 aa16.59■□□□□ 0.25
SGCD-204ENST00000524347 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
SGCD-204ENST00000524347 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
SGCD-204ENST00000524347 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
SGCD-204ENST00000524347 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
SGCD-204ENST00000524347 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
SGCD-204ENST00000524347 CACNA1FO60840 1977 aa16.58■□□□□ 0.25
SGCD-204ENST00000524347 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
SGCD-204ENST00000524347 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
SGCD-204ENST00000524347 NLGN1Q8N2Q7 840 aa16.58■□□□□ 0.24
SGCD-204ENST00000524347 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
SGCD-204ENST00000524347 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
SGCD-204ENST00000524347 PIP4K2AP48426 406 aaPredicted RBP16.57■□□□□ 0.24
SGCD-204ENST00000524347 RARSP54136 660 aaKnown RBP16.57■□□□□ 0.24
SGCD-204ENST00000524347 RRP1P56182 461 aaKnown RBP16.57■□□□□ 0.24
SGCD-204ENST00000524347 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
SGCD-204ENST00000524347 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
SGCD-204ENST00000524347 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
SGCD-204ENST00000524347 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
SGCD-204ENST00000524347 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
SGCD-204ENST00000524347 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
SGCD-204ENST00000524347 A1BGP04217 495 aa16.55■□□□□ 0.24
SGCD-204ENST00000524347 ZNF784Q8NCA9 323 aaPredicted RBP16.55■□□□□ 0.24
SGCD-204ENST00000524347 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
SGCD-204ENST00000524347 SCN7AQ01118 1682 aa16.55■□□□□ 0.24
SGCD-204ENST00000524347 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
SGCD-204ENST00000524347 VAMP4O75379 141 aa16.54■□□□□ 0.24
SGCD-204ENST00000524347 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
SGCD-204ENST00000524347 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
SGCD-204ENST00000524347 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
SGCD-204ENST00000524347 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
SGCD-204ENST00000524347 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms