RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 C1orf141Q5JVX7 400 aa11.55□□□□□ -0.56
CTNNA1-242ENST00000524292 ZNF530Q6P9A1 599 aaPredicted RBP11.55□□□□□ -0.56
CTNNA1-242ENST00000524292 DCAF5Q96JK2 942 aa11.55□□□□□ -0.56
CTNNA1-242ENST00000524292 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
CTNNA1-242ENST00000524292 TAF1LQ8IZX4 1826 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 ERVV-2B6SEH9 535 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 GPR162Q16538 588 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 UTRNP46939 3433 aa11.54□□□□□ -0.56
CTNNA1-242ENST00000524292 PHF14O94880 888 aa11.53□□□□□ -0.56
CTNNA1-242ENST00000524292 SSFA2P28290 1259 aa11.53□□□□□ -0.56
CTNNA1-242ENST00000524292 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
CTNNA1-242ENST00000524292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-242ENST00000524292 CABP4P57796 275 aa11.52□□□□□ -0.57
CTNNA1-242ENST00000524292 SULT6B1Q6IMI4 303 aa11.52□□□□□ -0.57
CTNNA1-242ENST00000524292 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
CTNNA1-242ENST00000524292 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-242ENST00000524292 GNPATO15228 680 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 IL13P35225 146 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 MTHFSP49914 203 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 ATG3Q9NT62 314 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 KDRP35968 1356 aa11.51□□□□□ -0.57
CTNNA1-242ENST00000524292 CC2D1BQ5T0F9 858 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-242ENST00000524292 NLGN2Q8NFZ4 835 aa11.5□□□□□ -0.57
CTNNA1-242ENST00000524292 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
CTNNA1-242ENST00000524292 KDM6AO15550 1401 aaPredicted RBP11.5□□□□□ -0.57
CTNNA1-242ENST00000524292 GOLGB1Q14789 3259 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-242ENST00000524292 ITPK1Q13572 414 aa11.49□□□□□ -0.57
CTNNA1-242ENST00000524292 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
CTNNA1-242ENST00000524292 CHD4Q14839 1912 aa11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 PDCD7Q8N8D1 485 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
CTNNA1-242ENST00000524292 ZNF831Q5JPB2 1677 aa11.47□□□□□ -0.57
CTNNA1-242ENST00000524292 DIAPH1O60610 1272 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-242ENST00000524292 AKAP4Q5JQC9 854 aa11.47□□□□□ -0.57
CTNNA1-242ENST00000524292 HS6ST3Q8IZP7 471 aa11.47□□□□□ -0.57
CTNNA1-242ENST00000524292 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-242ENST00000524292 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 PTCD1O75127 700 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 HMOX1P09601 288 aa11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 TRAPPC3LQ5T215 181 aa11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 SMIM5Q71RC9 77 aa11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
CTNNA1-242ENST00000524292 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
CTNNA1-242ENST00000524292 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-242ENST00000524292 YBX3P16989 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTNNA1-242ENST00000524292 RFC4P35249 363 aa11.44□□□□□ -0.58
CTNNA1-242ENST00000524292 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
CTNNA1-242ENST00000524292 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
CTNNA1-242ENST00000524292 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
CTNNA1-242ENST00000524292 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 U2SURPO15042 1029 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 MMP10P09238 476 aa11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 CFAP53Q96M91 514 aa11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 SLC52A2Q9HAB3 445 aa11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 SCN11AQ9UI33 1791 aa11.43□□□□□ -0.58
CTNNA1-242ENST00000524292 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-242ENST00000524292 CRKLP46109 303 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-242ENST00000524292 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-242ENST00000524292 SCUBE2Q9NQ36 999 aa11.42□□□□□ -0.58
CTNNA1-242ENST00000524292 MRC1P22897 1456 aa11.42□□□□□ -0.58
CTNNA1-242ENST00000524292 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-242ENST00000524292 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-242ENST00000524292 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
CTNNA1-242ENST00000524292 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-242ENST00000524292 GYS1P13807 737 aa11.4□□□□□ -0.58
CTNNA1-242ENST00000524292 GAS2L2Q8NHY3 880 aa11.4□□□□□ -0.58
CTNNA1-242ENST00000524292 LGR6Q9HBX8 967 aa11.4□□□□□ -0.58
CTNNA1-242ENST00000524292 CCDC87Q9NVE4 849 aa11.4□□□□□ -0.58
CTNNA1-242ENST00000524292 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.58
CTNNA1-242ENST00000524292 TJP1Q07157 1748 aa11.39□□□□□ -0.59
CTNNA1-242ENST00000524292 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-242ENST00000524292 NUDCQ9Y266 331 aa11.39□□□□□ -0.59
CTNNA1-242ENST00000524292 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 MYH14Q7Z406 1995 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 C10orf71Q711Q0 1435 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 TGFB2P61812 414 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 TEFQ10587 303 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 DNAJC10Q8IXB1 793 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 MFRPQ9BY79 579 aa11.38□□□□□ -0.59
CTNNA1-242ENST00000524292 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 ADAMTS7Q9UKP4 1686 aa11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 ZPR1O75312 459 aa11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms