RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
SPIDR-223ENST00000524033 COG3Q96JB2 828 aa10.01□□□□□ -0.81
SPIDR-223ENST00000524033 CARD14Q9BXL6 1004 aa10.01□□□□□ -0.81
SPIDR-223ENST00000524033 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
SPIDR-223ENST00000524033 CD163L1Q9NR16 1453 aa10.01□□□□□ -0.81
SPIDR-223ENST00000524033 ERBB3P21860 1342 aa10.01□□□□□ -0.81
SPIDR-223ENST00000524033 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
SPIDR-223ENST00000524033 TESPA1A2RU30 521 aaPredicted RBP10□□□□□ -0.81
SPIDR-223ENST00000524033 APAF1O14727 1248 aa10□□□□□ -0.81
SPIDR-223ENST00000524033 IL2RBP14784 551 aa10□□□□□ -0.81
SPIDR-223ENST00000524033 IP6K1Q92551 441 aa10□□□□□ -0.81
SPIDR-223ENST00000524033 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
SPIDR-223ENST00000524033 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
SPIDR-223ENST00000524033 KCNQ2O43526 872 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 AMPHP49418 695 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 AAMPQ13685 434 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 TMEM92Q6UXU6 159 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 CCDC146Q8IYE0 955 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 LTV1Q96GA3 475 aaPredicted RBP9.99□□□□□ -0.81
SPIDR-223ENST00000524033 SPON1Q9HCB6 807 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 MAPK8IP3Q9UPT6 1336 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
SPIDR-223ENST00000524033 NFAT5O94916 1531 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 BCAR3O75815 825 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 IGHDP01880 384 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 FBLN1P23142 703 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
SPIDR-223ENST00000524033 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 RGPD1P0DJD0 1748 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 BCL9O00512 1426 aa9.98□□□□□ -0.81
SPIDR-223ENST00000524033 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
SPIDR-223ENST00000524033 FYB1O15117 783 aa9.97□□□□□ -0.81
SPIDR-223ENST00000524033 TBC1D12O60347 775 aa9.97□□□□□ -0.81
SPIDR-223ENST00000524033 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
SPIDR-223ENST00000524033 FRAT1Q92837 279 aaPredicted RBP9.97□□□□□ -0.81
SPIDR-223ENST00000524033 PPP1R1BQ9UD71 204 aaPredicted RBP9.97□□□□□ -0.81
SPIDR-223ENST00000524033 UTRNP46939 3433 aa9.96□□□□□ -0.81
SPIDR-223ENST00000524033 HOXC9P31274 260 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 CCDC27Q2M243 656 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 WWC1Q8IX03 1113 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 GGNBP2Q9H3C7 697 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 MAP3K19Q56UN5 1328 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 NSD2O96028 1365 aa9.96□□□□□ -0.82
SPIDR-223ENST00000524033 ANO8Q9HCE9 1232 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-223ENST00000524033 STK32BQ9NY57 414 aa9.95□□□□□ -0.82
SPIDR-223ENST00000524033 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
SPIDR-223ENST00000524033 COL18A1P39060 1754 aa9.95□□□□□ -0.82
SPIDR-223ENST00000524033 TNS1Q9HBL0 1735 aaKnown RBP9.94□□□□□ -0.82
SPIDR-223ENST00000524033 RGS3P49796 1198 aa9.94□□□□□ -0.82
SPIDR-223ENST00000524033 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
SPIDR-223ENST00000524033 RRS1Q15050 365 aaKnown RBP9.94□□□□□ -0.82
SPIDR-223ENST00000524033 SLC15A2Q16348 729 aa9.94□□□□□ -0.82
SPIDR-223ENST00000524033 WDR63Q8IWG1 891 aa9.94□□□□□ -0.82
SPIDR-223ENST00000524033 PDGFDQ9GZP0 370 aaPredicted RBP9.94□□□□□ -0.82
SPIDR-223ENST00000524033 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
SPIDR-223ENST00000524033 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 PARP4Q9UKK3 1724 aaKnown RBP9.93□□□□□ -0.82
SPIDR-223ENST00000524033 ABCC6O95255 1503 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 ZBTB7AO95365 584 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 PDIA6Q15084 440 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 ZCRB1Q8TBF4 217 aaKnown RBP9.93□□□□□ -0.82
SPIDR-223ENST00000524033 RUNDC1Q96C34 613 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 LRP5O75197 1615 aa9.93□□□□□ -0.82
SPIDR-223ENST00000524033 TNS2Q63HR2 1409 aa9.92□□□□□ -0.82
SPIDR-223ENST00000524033 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
SPIDR-223ENST00000524033 FRAT2O75474 233 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-223ENST00000524033 MLLT3P42568 568 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-223ENST00000524033 PRIM1P49642 420 aaKnown RBP9.92□□□□□ -0.82
SPIDR-223ENST00000524033 NBPF6Q5VWK0 638 aa9.92□□□□□ -0.82
SPIDR-223ENST00000524033 SYTL4Q96C24 671 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-223ENST00000524033 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
SPIDR-223ENST00000524033 AKAP12Q02952 1782 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 PANK1Q8TE04 598 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 RAPGEF4Q8WZA2 1011 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 TBC1D32Q96NH3 1257 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 SCUBE2Q9NQ36 999 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 LRRC37A3O60309 1634 aa9.91□□□□□ -0.82
SPIDR-223ENST00000524033 GOLGB1Q14789 3259 aaKnown RBP9.91□□□□□ -0.82
SPIDR-223ENST00000524033 PEAK1Q9H792 1746 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 RLBP1P12271 317 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 USHBP1Q8N6Y0 703 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 DAXXQ9UER7 740 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-223ENST00000524033 COG6Q9Y2V7 657 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
SPIDR-223ENST00000524033 CT47B1P0C2W7 299 aaPredicted RBP9.89□□□□□ -0.83
SPIDR-223ENST00000524033 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
SPIDR-223ENST00000524033 PTGER2P43116 358 aa9.89□□□□□ -0.83
SPIDR-223ENST00000524033 SLC27A3Q5K4L6 730 aa9.89□□□□□ -0.83
SPIDR-223ENST00000524033 MTFR1LQ9H019 292 aa9.89□□□□□ -0.83
SPIDR-223ENST00000524033 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
SPIDR-223ENST00000524033 MON2Q7Z3U7 1717 aa9.89□□□□□ -0.83
SPIDR-223ENST00000524033 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
SPIDR-223ENST00000524033 EVI5O60447 810 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms