RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 FMNL2Q96PY5 1086 aa25.36■■□□□ 1.65
FBXO28-205ENST00000523990 SCN7AQ01118 1682 aa25.36■■□□□ 1.65
FBXO28-205ENST00000523990 COL15A1P39059 1388 aa25.35■■□□□ 1.65
FBXO28-205ENST00000523990 NLGN1Q8N2Q7 840 aa25.35■■□□□ 1.65
FBXO28-205ENST00000523990 CD2APQ9Y5K6 639 aa25.35■■□□□ 1.65
FBXO28-205ENST00000523990 MMP10P09238 476 aa25.34■■□□□ 1.65
FBXO28-205ENST00000523990 STARD3NLO95772 234 aa25.33■■□□□ 1.65
FBXO28-205ENST00000523990 SRP68Q9UHB9 627 aaKnown RBP25.33■■□□□ 1.65
FBXO28-205ENST00000523990 TEX13AQ9BXU3 409 aaPredicted RBP25.32■■□□□ 1.64
FBXO28-205ENST00000523990 ZNF316A6NFI3 1004 aaPredicted RBP25.31■■□□□ 1.64
FBXO28-205ENST00000523990 AFDNP55196 1824 aaKnown RBP25.31■■□□□ 1.64
FBXO28-205ENST00000523990 BCORQ6W2J9 1755 aa25.31■■□□□ 1.64
FBXO28-205ENST00000523990 N4BP2Q86UW6 1770 aaPredicted RBP25.31■■□□□ 1.64
FBXO28-205ENST00000523990 C10orf71Q711Q0 1435 aa25.3■■□□□ 1.64
FBXO28-205ENST00000523990 TAF7Q15545 349 aaPredicted RBP25.29■■□□□ 1.64
FBXO28-205ENST00000523990 BRCA1P38398 1863 aaKnown RBP25.29■■□□□ 1.64
FBXO28-205ENST00000523990 FKBP8Q14318 412 aa25.29■■□□□ 1.64
FBXO28-205ENST00000523990 WDR43Q15061 677 aaKnown RBP eCLIP25.29■■□□□ 1.64
FBXO28-205ENST00000523990 NRXN2Q9P2S2 1712 aa25.28■■□□□ 1.64
FBXO28-205ENST00000523990 CANXP27824 592 aaKnown RBP25.28■■□□□ 1.64
FBXO28-205ENST00000523990 THUMPD2Q9BTF0 503 aaKnown RBP25.28■■□□□ 1.64
FBXO28-205ENST00000523990 EIF5P55010 431 aaKnown RBP25.27■■□□□ 1.64
FBXO28-205ENST00000523990 NARFQ9UHQ1 456 aa25.27■■□□□ 1.64
FBXO28-205ENST00000523990 ZPR1O75312 459 aa25.26■■□□□ 1.63
FBXO28-205ENST00000523990 GPR162Q16538 588 aa25.26■■□□□ 1.63
FBXO28-205ENST00000523990 USPL1Q5W0Q7 1092 aa25.26■■□□□ 1.63
FBXO28-205ENST00000523990 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
FBXO28-205ENST00000523990 PRAMEF22A3QJZ6 481 aa25.25■■□□□ 1.63
FBXO28-205ENST00000523990 TMPOP42166 694 aaKnown RBP25.25■■□□□ 1.63
FBXO28-205ENST00000523990 MIS18AQ9NYP9 233 aa25.25■■□□□ 1.63
FBXO28-205ENST00000523990 PXDNLA1KZ92 1463 aa25.24■■□□□ 1.63
FBXO28-205ENST00000523990 RIPK4P57078 832 aa25.24■■□□□ 1.63
FBXO28-205ENST00000523990 ADAMTS8Q9UP79 889 aa25.24■■□□□ 1.63
FBXO28-205ENST00000523990 PARP3Q9Y6F1 533 aa25.24■■□□□ 1.63
FBXO28-205ENST00000523990 SNRPA1P09661 255 aaKnown RBP25.23■■□□□ 1.63
FBXO28-205ENST00000523990 IL6STP40189 918 aaPredicted RBP25.23■■□□□ 1.63
FBXO28-205ENST00000523990 DDR1Q08345 913 aa25.23■■□□□ 1.63
FBXO28-205ENST00000523990 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
FBXO28-205ENST00000523990 PNISRQ8TF01 805 aaKnown RBP25.23■■□□□ 1.63
FBXO28-205ENST00000523990 USP16Q9Y5T5 823 aa25.23■■□□□ 1.63
FBXO28-205ENST00000523990 A1BGP04217 495 aa25.22■■□□□ 1.63
FBXO28-205ENST00000523990 YBX3P16989 372 aaKnown RBP eCLIP25.22■■□□□ 1.63
FBXO28-205ENST00000523990 YY1P25490 414 aa25.22■■□□□ 1.63
FBXO28-205ENST00000523990 RUNDC1Q96C34 613 aa25.22■■□□□ 1.63
FBXO28-205ENST00000523990 BCL2L12Q9HB09 334 aa25.21■■□□□ 1.63
FBXO28-205ENST00000523990 A0A087WZG4 1122 aa25.2■■□□□ 1.63
FBXO28-205ENST00000523990 TM4SF1P30408 202 aa25.2■■□□□ 1.63
FBXO28-205ENST00000523990 POLRMTO00411 1230 aaKnown RBP25.2■■□□□ 1.62
FBXO28-205ENST00000523990 LMOD3Q0VAK6 560 aa25.2■■□□□ 1.62
FBXO28-205ENST00000523990 RRP7AQ9Y3A4 280 aaKnown RBP25.2■■□□□ 1.62
FBXO28-205ENST00000523990 ZNF330Q9Y3S2 320 aaPredicted RBP25.19■■□□□ 1.62
FBXO28-205ENST00000523990 DLEC1Q9Y238 1755 aa25.17■■□□□ 1.62
FBXO28-205ENST00000523990 PIP4K2AP48426 406 aaPredicted RBP25.17■■□□□ 1.62
FBXO28-205ENST00000523990 EIF4A1P60842 406 aaKnown RBP25.17■■□□□ 1.62
FBXO28-205ENST00000523990 NFIXQ14938 502 aa25.17■■□□□ 1.62
FBXO28-205ENST00000523990 ARFGEF1Q9Y6D6 1849 aa25.17■■□□□ 1.62
FBXO28-205ENST00000523990 TGFB2P61812 414 aa25.16■■□□□ 1.62
FBXO28-205ENST00000523990 NEUROD2Q15784 382 aa25.16■■□□□ 1.62
FBXO28-205ENST00000523990 GIGYF1O75420 1035 aaPredicted RBP25.15■■□□□ 1.62
FBXO28-205ENST00000523990 TRIM35Q9UPQ4 493 aa25.15■■□□□ 1.62
FBXO28-205ENST00000523990 TBC1D2BQ9UPU7 963 aa25.15■■□□□ 1.62
FBXO28-205ENST00000523990 ANKRD31Q8N7Z5 1873 aa25.15■■□□□ 1.62
FBXO28-205ENST00000523990 GRIN3BO60391 1043 aa25.14■■□□□ 1.62
FBXO28-205ENST00000523990 CCDC184Q52MB2 194 aa25.14■■□□□ 1.62
FBXO28-205ENST00000523990 TSPYL4Q9UJ04 414 aa25.14■■□□□ 1.62
FBXO28-205ENST00000523990 NBPF26B4DH59 902 aa25.13■■□□□ 1.61
FBXO28-205ENST00000523990 NBPF10Q6P3W6 841 aaKnown RBP25.13■■□□□ 1.61
FBXO28-205ENST00000523990 NPM2Q86SE8 214 aaKnown RBP25.13■■□□□ 1.61
FBXO28-205ENST00000523990 NBPF15Q8N660 670 aa25.13■■□□□ 1.61
FBXO28-205ENST00000523990 WWC3Q9ULE0 1092 aa25.13■■□□□ 1.61
FBXO28-205ENST00000523990 CAMTA2O94983 1202 aa25.12■■□□□ 1.61
FBXO28-205ENST00000523990 BABAM1Q9NWV8 329 aa25.12■■□□□ 1.61
FBXO28-205ENST00000523990 DZIP3Q86Y13 1208 aaKnown RBP25.12■■□□□ 1.61
FBXO28-205ENST00000523990 NUP98P52948 1817 aa25.11■■□□□ 1.61
FBXO28-205ENST00000523990 A0A0G2JLW4 131 aa25.11■■□□□ 1.61
FBXO28-205ENST00000523990 TBC1D9BQ66K14 1250 aa25.11■■□□□ 1.61
FBXO28-205ENST00000523990 ANP32CO43423 234 aa25.1■■□□□ 1.61
FBXO28-205ENST00000523990 DPEP1P16444 411 aa25.1■■□□□ 1.61
FBXO28-205ENST00000523990 CARMIL3Q8ND23 1372 aa25.09■■□□□ 1.61
FBXO28-205ENST00000523990 SERPINB2P05120 415 aa25.09■■□□□ 1.61
FBXO28-205ENST00000523990 COL11A2P13942 1736 aaPredicted RBP25.08■■□□□ 1.61
FBXO28-205ENST00000523990 KCNA3P22001 575 aa25.08■■□□□ 1.61
FBXO28-205ENST00000523990 BICDL1Q6ZP65 573 aa25.08■■□□□ 1.61
FBXO28-205ENST00000523990 APAF1O14727 1248 aa25.06■■□□□ 1.6
FBXO28-205ENST00000523990 CHL1O00533 1208 aa25.04■■□□□ 1.6
FBXO28-205ENST00000523990 CLEC4GQ6UXB4 293 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 BCS1LQ9Y276 419 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 ERBB4Q15303 1308 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 RGL2O15211 777 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 CHRNA5P30532 468 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 MRS2Q9HD23 443 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 ZNF652Q9Y2D9 606 aa25.03■■□□□ 1.6
FBXO28-205ENST00000523990 CACNA1SQ13698 1873 aa25.02■■□□□ 1.6
FBXO28-205ENST00000523990 SETDB2Q96T68 719 aa25.02■■□□□ 1.6
FBXO28-205ENST00000523990 PRR5LQ6MZQ0 368 aa25.01■■□□□ 1.59
FBXO28-205ENST00000523990 ZNF784Q8NCA9 323 aaPredicted RBP25.01■■□□□ 1.59
FBXO28-205ENST00000523990 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
FBXO28-205ENST00000523990 LAS1LQ9Y4W2 734 aaKnown RBP25.01■■□□□ 1.59
FBXO28-205ENST00000523990 ANKRD36CQ5JPF3 1778 aa25.01■■□□□ 1.59
FBXO28-205ENST00000523990 ARFGEF2Q9Y6D5 1785 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms