RNA–Protein interactions for RNA: ENST00000523892.5

NDRG1-227, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-227ENST00000523892 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
NDRG1-227ENST00000523892 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
NDRG1-227ENST00000523892 KCNQ3O43525 872 aa11.87□□□□□ -0.51
NDRG1-227ENST00000523892 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
NDRG1-227ENST00000523892 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
NDRG1-227ENST00000523892 TGFB2P61812 414 aa11.87□□□□□ -0.51
NDRG1-227ENST00000523892 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
NDRG1-227ENST00000523892 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
NDRG1-227ENST00000523892 COL15A1P39059 1388 aa11.87□□□□□ -0.51
NDRG1-227ENST00000523892 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
NDRG1-227ENST00000523892 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
NDRG1-227ENST00000523892 CHRNA5P30532 468 aa11.86□□□□□ -0.51
NDRG1-227ENST00000523892 PRKAR2BP31323 418 aa11.86□□□□□ -0.51
NDRG1-227ENST00000523892 NFIXQ14938 502 aa11.86□□□□□ -0.51
NDRG1-227ENST00000523892 ZNF526Q8TF50 670 aaPredicted RBP11.86□□□□□ -0.51
NDRG1-227ENST00000523892 BCORQ6W2J9 1755 aa11.86□□□□□ -0.51
NDRG1-227ENST00000523892 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
NDRG1-227ENST00000523892 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
NDRG1-227ENST00000523892 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
NDRG1-227ENST00000523892 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
NDRG1-227ENST00000523892 CCDC88AQ3V6T2 1871 aa11.85□□□□□ -0.51
NDRG1-227ENST00000523892 HEG1Q9ULI3 1381 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 PRAMEF22A3QJZ6 481 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 KIF3CO14782 793 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 PRELPP51888 382 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
NDRG1-227ENST00000523892 ZNF790Q6PG37 636 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
NDRG1-227ENST00000523892 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
NDRG1-227ENST00000523892 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
NDRG1-227ENST00000523892 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
NDRG1-227ENST00000523892 CACNA1SQ13698 1873 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 FCHSD2O94868 740 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 A1BGP04217 495 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
NDRG1-227ENST00000523892 DCTN1Q14203 1278 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 MCM10Q7L590 875 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 USP16Q9Y5T5 823 aa11.81□□□□□ -0.52
NDRG1-227ENST00000523892 ZPR1O75312 459 aa11.8□□□□□ -0.52
NDRG1-227ENST00000523892 TBC1D9BQ66K14 1250 aa11.8□□□□□ -0.52
NDRG1-227ENST00000523892 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
NDRG1-227ENST00000523892 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
NDRG1-227ENST00000523892 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 FER1L6Q2WGJ9 1857 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 SERPINB2P05120 415 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
NDRG1-227ENST00000523892 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
NDRG1-227ENST00000523892 TEFQ10587 303 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 TTC5Q8N0Z6 440 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
NDRG1-227ENST00000523892 TIAM2Q8IVF5 1701 aa11.78□□□□□ -0.52
NDRG1-227ENST00000523892 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
NDRG1-227ENST00000523892 CAMTA2O94983 1202 aa11.78□□□□□ -0.52
NDRG1-227ENST00000523892 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
NDRG1-227ENST00000523892 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
NDRG1-227ENST00000523892 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
NDRG1-227ENST00000523892 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.52
NDRG1-227ENST00000523892 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
NDRG1-227ENST00000523892 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
NDRG1-227ENST00000523892 RASSF7Q02833 373 aa11.77□□□□□ -0.53
NDRG1-227ENST00000523892 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
NDRG1-227ENST00000523892 BICDL1Q6ZP65 573 aa11.77□□□□□ -0.53
NDRG1-227ENST00000523892 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
NDRG1-227ENST00000523892 PLEKHF1Q96S99 279 aa11.77□□□□□ -0.53
NDRG1-227ENST00000523892 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
NDRG1-227ENST00000523892 STARD3NLO95772 234 aa11.76□□□□□ -0.53
NDRG1-227ENST00000523892 PRR5LQ6MZQ0 368 aa11.76□□□□□ -0.53
NDRG1-227ENST00000523892 CFAP53Q96M91 514 aa11.76□□□□□ -0.53
NDRG1-227ENST00000523892 MIS18AQ9NYP9 233 aa11.76□□□□□ -0.53
NDRG1-227ENST00000523892 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
NDRG1-227ENST00000523892 NUP98P52948 1817 aa11.75□□□□□ -0.53
NDRG1-227ENST00000523892 NFKBIEO00221 500 aa11.75□□□□□ -0.53
NDRG1-227ENST00000523892 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
NDRG1-227ENST00000523892 HSPA6P17066 643 aa11.74□□□□□ -0.53
NDRG1-227ENST00000523892 RNF181Q9P0P0 153 aa11.74□□□□□ -0.53
NDRG1-227ENST00000523892 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
NDRG1-227ENST00000523892 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
NDRG1-227ENST00000523892 WDR90Q96KV7 1748 aa11.73□□□□□ -0.53
NDRG1-227ENST00000523892 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
NDRG1-227ENST00000523892 NUDCQ9Y266 331 aa11.73□□□□□ -0.53
NDRG1-227ENST00000523892 A0A087WZG4 1122 aa11.72□□□□□ -0.53
NDRG1-227ENST00000523892 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
NDRG1-227ENST00000523892 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
NDRG1-227ENST00000523892 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
NDRG1-227ENST00000523892 HLFQ16534 295 aa11.71□□□□□ -0.53
NDRG1-227ENST00000523892 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
NDRG1-227ENST00000523892 POTECB2RU33 542 aa11.7□□□□□ -0.54
NDRG1-227ENST00000523892 TOMM70O94826 608 aa11.7□□□□□ -0.54
NDRG1-227ENST00000523892 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
NDRG1-227ENST00000523892 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
NDRG1-227ENST00000523892 DNAJC5GQ8N7S2 189 aa11.7□□□□□ -0.54
NDRG1-227ENST00000523892 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
NDRG1-227ENST00000523892 PCNTO95613 3336 aa11.69□□□□□ -0.54
NDRG1-227ENST00000523892 H0YIN7 160 aa11.69□□□□□ -0.54
NDRG1-227ENST00000523892 SRGNP10124 158 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms