RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 CHMLP26374 656 aa13.19□□□□□ -0.3
RAB11FIP1-204ENST00000522774 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
RAB11FIP1-204ENST00000522774 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP1-204ENST00000522774 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP1-204ENST00000522774 DBF4Q9UBU7 674 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ERBB3P21860 1342 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 OVOS2A0A0G2JMS6 1433 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ST18O60284 1047 aa13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP1-204ENST00000522774 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 IL25Q9H293 177 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 MAP3K2Q9Y2U5 619 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 AOX1Q06278 1338 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 XRCC6P12956 609 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 PKP1Q13835 747 aa13.16□□□□□ -0.3
RAB11FIP1-204ENST00000522774 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
RAB11FIP1-204ENST00000522774 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 MST1RQ04912 1400 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 NEK4P51957 841 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
RAB11FIP1-204ENST00000522774 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
RAB11FIP1-204ENST00000522774 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
RAB11FIP1-204ENST00000522774 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 ALDH1L1O75891 902 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 ATF3P18847 181 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 MTX1Q13505 466 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 PDIA6Q15084 440 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
RAB11FIP1-204ENST00000522774 NUCB2P80303 420 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 MEGF6O75095 1541 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 MCCP23508 829 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 C5P01031 1676 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 ZDHHC9Q9Y397 364 aa13.11□□□□□ -0.31
RAB11FIP1-204ENST00000522774 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 COL18A1P39060 1754 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 SCN11AQ9UI33 1791 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 PHKG2P15735 406 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 ANAPC15P60006 121 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
RAB11FIP1-204ENST00000522774 PTMSP20962 102 aa13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 CRYBG1Q9Y4K1 1723 aa13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 GOLGA6L22H0YM25 854 aa13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 TATP17735 454 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 LINS1Q8NG48 757 aa13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-204ENST00000522774 GRM8O00222 908 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 SGSM2O43147 1006 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 MYL6BP14649 208 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 MRE11P49959 708 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 IL17RAQ96F46 866 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CHAMP1Q96JM3 812 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 IGKV5-2P06315 115 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP1-204ENST00000522774 HSPA4P34932 840 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms