RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 C20orf194Q5TEA3 1177 aa28.26■■■□□ 2.12
PTP4A3-204ENST00000521578 DNAJC10Q8IXB1 793 aa28.26■■■□□ 2.12
PTP4A3-204ENST00000521578 C8orf58Q8NAV2 365 aa28.26■■■□□ 2.12
PTP4A3-204ENST00000521578 GIGYF1O75420 1035 aaPredicted RBP28.26■■■□□ 2.11
PTP4A3-204ENST00000521578 EXOSC9Q06265 439 aaKnown RBP28.26■■■□□ 2.11
PTP4A3-204ENST00000521578 TJP1Q07157 1748 aa28.24■■■□□ 2.11
PTP4A3-204ENST00000521578 TSPYL6Q8N831 410 aa28.23■■■□□ 2.11
PTP4A3-204ENST00000521578 USP16Q9Y5T5 823 aa28.23■■■□□ 2.11
PTP4A3-204ENST00000521578 LINC00116Q8NCU8 138 aa28.23■■■□□ 2.11
PTP4A3-204ENST00000521578 C5P01031 1676 aa28.23■■■□□ 2.11
PTP4A3-204ENST00000521578 ZNF831Q5JPB2 1677 aa28.22■■■□□ 2.11
PTP4A3-204ENST00000521578 TEX13AQ9BXU3 409 aaPredicted RBP28.21■■■□□ 2.11
PTP4A3-204ENST00000521578 TAF1LQ8IZX4 1826 aa28.2■■■□□ 2.11
PTP4A3-204ENST00000521578 RREB1Q92766 1687 aa28.19■■■□□ 2.1
PTP4A3-204ENST00000521578 CYP19A1P11511 503 aaPredicted RBP28.19■■■□□ 2.1
PTP4A3-204ENST00000521578 EIF2S2P20042 333 aaKnown RBP28.19■■■□□ 2.1
PTP4A3-204ENST00000521578 TWISTNBQ3B726 338 aaPredicted RBP28.19■■■□□ 2.1
PTP4A3-204ENST00000521578 NECTIN2Q92692 538 aa28.19■■■□□ 2.1
PTP4A3-204ENST00000521578 STARD3NLO95772 234 aa28.18■■■□□ 2.1
PTP4A3-204ENST00000521578 CICQ96RK0 1608 aaPredicted RBP28.18■■■□□ 2.1
PTP4A3-204ENST00000521578 BCAR3O75815 825 aa28.18■■■□□ 2.1
PTP4A3-204ENST00000521578 COL5A3P25940 1745 aaPredicted RBP28.17■■■□□ 2.1
PTP4A3-204ENST00000521578 SOCS7O14512 581 aa28.16■■■□□ 2.1
PTP4A3-204ENST00000521578 HOXB7P09629 217 aa28.16■■■□□ 2.1
PTP4A3-204ENST00000521578 CRKLP46109 303 aaKnown RBP28.16■■■□□ 2.1
PTP4A3-204ENST00000521578 NUP188Q5SRE5 1749 aa28.16■■■□□ 2.1
PTP4A3-204ENST00000521578 A1BGP04217 495 aa28.15■■■□□ 2.1
PTP4A3-204ENST00000521578 LAMB4A4D0S4 1761 aa28.15■■■□□ 2.1
PTP4A3-204ENST00000521578 HDGFL1Q5TGJ6 251 aa28.15■■■□□ 2.1
PTP4A3-204ENST00000521578 C4BP0C0L5 1744 aa28.14■■■□□ 2.1
PTP4A3-204ENST00000521578 PIP4K2AP48426 406 aaPredicted RBP28.14■■■□□ 2.1
PTP4A3-204ENST00000521578 MYH14Q7Z406 1995 aaKnown RBP28.14■■■□□ 2.09
PTP4A3-204ENST00000521578 VAMP4O75379 141 aa28.13■■■□□ 2.09
PTP4A3-204ENST00000521578 PDE3AQ14432 1141 aa28.13■■■□□ 2.09
PTP4A3-204ENST00000521578 INTS5Q6P9B9 1019 aaKnown RBP28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 CCDC87Q9NVE4 849 aa28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 ZNF827Q17R98 1081 aa28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 AK7Q96M32 723 aa28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 ANO8Q9HCE9 1232 aaPredicted RBP28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 ZBTB1Q9Y2K1 713 aa28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 CNTNAP4Q9C0A0 1308 aa28.12■■■□□ 2.09
PTP4A3-204ENST00000521578 CT47B1P0C2W7 299 aaPredicted RBP28.11■■■□□ 2.09
PTP4A3-204ENST00000521578 CANXP27824 592 aaKnown RBP28.11■■■□□ 2.09
PTP4A3-204ENST00000521578 RARSP54136 660 aaKnown RBP28.11■■■□□ 2.09
PTP4A3-204ENST00000521578 SOS1Q07889 1333 aaPredicted RBP28.11■■■□□ 2.09
PTP4A3-204ENST00000521578 TCERG1O14776 1098 aaKnown RBP28.1■■■□□ 2.09
PTP4A3-204ENST00000521578 HMGB2P26583 209 aaKnown RBP28.1■■■□□ 2.09
PTP4A3-204ENST00000521578 RC3H1Q5TC82 1133 aaKnown RBP28.1■■■□□ 2.09
PTP4A3-204ENST00000521578 GNPATO15228 680 aa28.09■■■□□ 2.09
PTP4A3-204ENST00000521578 SMIM5Q71RC9 77 aa28.09■■■□□ 2.09
PTP4A3-204ENST00000521578 AKT1S1Q96B36 256 aa28.09■■■□□ 2.09
PTP4A3-204ENST00000521578 KDM2BQ8NHM5 1336 aa28.08■■■□□ 2.09
PTP4A3-204ENST00000521578 NBPF26B4DH59 902 aa28.08■■■□□ 2.09
PTP4A3-204ENST00000521578 NBPF14Q5TI25 921 aa28.08■■■□□ 2.09
PTP4A3-204ENST00000521578 NBPF10Q6P3W6 841 aaKnown RBP28.08■■■□□ 2.09
PTP4A3-204ENST00000521578 NBPF15Q8N660 670 aa28.08■■■□□ 2.09
PTP4A3-204ENST00000521578 CHPF2Q9P2E5 772 aa28.08■■■□□ 2.09
PTP4A3-204ENST00000521578 ANXA1P04083 346 aa28.07■■■□□ 2.08
PTP4A3-204ENST00000521578 CCDC30Q5VVM6 783 aa28.07■■■□□ 2.08
PTP4A3-204ENST00000521578 STK32BQ9NY57 414 aa28.07■■■□□ 2.08
PTP4A3-204ENST00000521578 ZNF330Q9Y3S2 320 aaPredicted RBP28.07■■■□□ 2.08
PTP4A3-204ENST00000521578 MYL6BP14649 208 aa28.06■■■□□ 2.08
PTP4A3-204ENST00000521578 AMIGO3Q86WK7 504 aa28.06■■■□□ 2.08
PTP4A3-204ENST00000521578 TFCP2L1Q9NZI6 479 aa28.06■■■□□ 2.08
PTP4A3-204ENST00000521578 SLC15A2Q16348 729 aa28.06■■■□□ 2.08
PTP4A3-204ENST00000521578 PROSER3Q2NL68 480 aa28.06■■■□□ 2.08
PTP4A3-204ENST00000521578 PDIA6Q15084 440 aa28.05■■■□□ 2.08
PTP4A3-204ENST00000521578 RPS6KA4O75676 772 aa28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 PHF14O94880 888 aa28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 CHMP4AQ9BY43 222 aa28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 RTCBQ9Y3I0 505 aaKnown RBP28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 ERBB4Q15303 1308 aa28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 CENPQQ7L2Z9 268 aaPredicted RBP28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 DBF4Q9UBU7 674 aaPredicted RBP28.04■■■□□ 2.08
PTP4A3-204ENST00000521578 MS4A1P11836 297 aa28.03■■■□□ 2.08
PTP4A3-204ENST00000521578 STK31Q9BXU1 1019 aa28.03■■■□□ 2.08
PTP4A3-204ENST00000521578 DDX21Q9NR30 783 aaKnown RBP eCLIP28.03■■■□□ 2.085e-7■■■■■ 41.3
PTP4A3-204ENST00000521578 UBR3Q6ZT12 1888 aa28.03■■■□□ 2.08
PTP4A3-204ENST00000521578 IL6STP40189 918 aaPredicted RBP28.01■■■□□ 2.07
PTP4A3-204ENST00000521578 TUBGCP6Q96RT7 1819 aa28.01■■■□□ 2.07
PTP4A3-204ENST00000521578 EIF5P55010 431 aaKnown RBP28.01■■■□□ 2.07
PTP4A3-204ENST00000521578 ZNF428Q96B54 188 aa28.01■■■□□ 2.07
PTP4A3-204ENST00000521578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28■■■□□ 2.07
PTP4A3-204ENST00000521578 SLC4A2P04920 1241 aa28■■■□□ 2.07
PTP4A3-204ENST00000521578 BCL2L13Q9BXK5 485 aa28■■■□□ 2.07
PTP4A3-204ENST00000521578 NPM2Q86SE8 214 aaKnown RBP27.99■■■□□ 2.07
PTP4A3-204ENST00000521578 SSH1Q8WYL5 1049 aa27.99■■■□□ 2.07
PTP4A3-204ENST00000521578 ARXQ96QS3 562 aa27.99■■■□□ 2.07
PTP4A3-204ENST00000521578 COL15A1P39059 1388 aa27.98■■■□□ 2.07
PTP4A3-204ENST00000521578 SSFA2P28290 1259 aa27.98■■■□□ 2.07
PTP4A3-204ENST00000521578 TRAPPC3LQ5T215 181 aa27.98■■■□□ 2.07
PTP4A3-204ENST00000521578 LRP10Q7Z4F1 713 aa27.98■■■□□ 2.07
PTP4A3-204ENST00000521578 HYPKQ9NX55 129 aa27.98■■■□□ 2.07
PTP4A3-204ENST00000521578 AAMPQ13685 434 aa27.97■■■□□ 2.07
PTP4A3-204ENST00000521578 ARHGEF1Q92888 912 aaKnown RBP27.97■■■□□ 2.07
PTP4A3-204ENST00000521578 PHAXQ9H814 394 aaKnown RBP27.97■■■□□ 2.07
PTP4A3-204ENST00000521578 PNPLA7Q6ZV29 1317 aa27.97■■■□□ 2.07
PTP4A3-204ENST00000521578 AIMP1Q12904 312 aaKnown RBP27.96■■■□□ 2.07
PTP4A3-204ENST00000521578 R3HDM1Q15032 1099 aaKnown RBP27.96■■■□□ 2.07
PTP4A3-204ENST00000521578 XAGE3Q8WTP9 111 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms