RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SVOPQ8N4V2 548 aa6.49□□□□□ -1.37
VPS13B-209ENST00000521559 VRTNQ9H8Y1 702 aa6.49□□□□□ -1.37
VPS13B-209ENST00000521559 ENAMQ9NRM1 1142 aa6.49□□□□□ -1.37
VPS13B-209ENST00000521559 LMOD1P29536 600 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-209ENST00000521559 SEC13P55735 322 aa6.48□□□□□ -1.37
VPS13B-209ENST00000521559 TEAD4Q15561 434 aa6.48□□□□□ -1.37
VPS13B-209ENST00000521559 SLC9A9Q8IVB4 645 aa6.48□□□□□ -1.37
VPS13B-209ENST00000521559 ZMYND15Q9H091 742 aa6.48□□□□□ -1.37
VPS13B-209ENST00000521559 ATXN7L1Q9ULK2 861 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-209ENST00000521559 GTF3C3Q9Y5Q9 886 aa6.48□□□□□ -1.37
VPS13B-209ENST00000521559 GJA3Q9Y6H8 435 aa6.48□□□□□ -1.37
VPS13B-209ENST00000521559 IGF1RP08069 1367 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 NOS2P35228 1153 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 PSMA6P60900 246 aaKnown RBP6.47□□□□□ -1.37
VPS13B-209ENST00000521559 FOXK2Q01167 660 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 ZNF385CQ66K41 422 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-209ENST00000521559 BICDL1Q6ZP65 573 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 TNS4Q8IZW8 715 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 ZNF295-AS1Q8N0V1 137 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-209ENST00000521559 NEUROD4Q9HD90 331 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 ZNF232Q9UNY5 417 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 KIAA1024Q9UPX6 916 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 PCDHGC4Q9Y5F7 938 aa6.47□□□□□ -1.37
VPS13B-209ENST00000521559 GPC6Q9Y625 555 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-209ENST00000521559 SERTM1A2A2V5 107 aa6.46□□□□□ -1.38
VPS13B-209ENST00000521559 ATP4AP20648 1035 aa6.46□□□□□ -1.38
VPS13B-209ENST00000521559 EPHA4P54764 986 aa6.46□□□□□ -1.38
VPS13B-209ENST00000521559 GAS2L2Q8NHY3 880 aa6.46□□□□□ -1.38
VPS13B-209ENST00000521559 L3MBTL2Q969R5 705 aa6.46□□□□□ -1.38
VPS13B-209ENST00000521559 LRRC4BQ9NT99 713 aa6.46□□□□□ -1.38
VPS13B-209ENST00000521559 A0A1W2PNR3 127 aa6.45□□□□□ -1.38
VPS13B-209ENST00000521559 FAM196BA6NMK8 535 aa6.45□□□□□ -1.38
VPS13B-209ENST00000521559 RNF225M0QZC1 329 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-209ENST00000521559 ATXN7O15265 892 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-209ENST00000521559 KANK4Q5T7N3 995 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-209ENST00000521559 ZCCHC2Q9C0B9 1178 aaKnown RBP6.45□□□□□ -1.38
VPS13B-209ENST00000521559 USP3Q9Y6I4 520 aa6.45□□□□□ -1.38
VPS13B-209ENST00000521559 SFI1A8K8P3 1242 aa6.44□□□□□ -1.38
VPS13B-209ENST00000521559 THBS1P07996 1170 aa6.44□□□□□ -1.38
VPS13B-209ENST00000521559 CELA2BP08218 269 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-209ENST00000521559 BMP4P12644 408 aa6.44□□□□□ -1.38
VPS13B-209ENST00000521559 MARSP56192 900 aaKnown RBP6.44□□□□□ -1.38
VPS13B-209ENST00000521559 UBAP2LQ14157 1087 aaKnown RBP6.44□□□□□ -1.38
VPS13B-209ENST00000521559 ZIC5Q96T25 663 aa6.44□□□□□ -1.38
VPS13B-209ENST00000521559 ADAMTS8Q9UP79 889 aa6.44□□□□□ -1.38
VPS13B-209ENST00000521559 PARP3Q9Y6F1 533 aa6.44□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L15C9J2P7 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L10C9JJH3 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L13C9JLJ4 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L12C9JPN9 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L11C9JVI0 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L21D6R901 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L18D6R9N7 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L22D6RA61 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L17D6RBQ6 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L19D6RCP7 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L20D6RJB6 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 PPP1R12BO60237 982 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-209ENST00000521559 ARHGEF15O94989 841 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 BCRP11274 1271 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 FGFR3P22607 806 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 HIRAP54198 1017 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-209ENST00000521559 USP17L24Q0WX57 530 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 PTK7Q13308 1070 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 SAMD5Q5TGI4 173 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 C1orf53Q5VUE5 145 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 LYPD4Q6UWN0 246 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 ANKMY2Q8IV38 441 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 STAG2Q8N3U4 1231 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 TSEN2Q8NCE0 465 aaKnown RBP6.43□□□□□ -1.38
VPS13B-209ENST00000521559 ZDHHC1Q8WTX9 485 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 HINFPQ9BQA5 517 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 OXCT2Q9BYC2 517 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-209ENST00000521559 TSPAN10Q9H1Z9 355 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-209ENST00000521559 NDFIP2Q9NV92 336 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 ANKIB1Q9P2G1 1089 aa6.43□□□□□ -1.38
VPS13B-209ENST00000521559 GDF2Q9UK05 429 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-209ENST00000521559 EML1O00423 815 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 BNIP3LO60238 219 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 DKK1O94907 266 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 RFX1P22670 979 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 TXLNAP40222 546 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 DPYDQ12882 1025 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 LAMC2Q13753 1193 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 HIF1AQ16665 826 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 CRTC2Q53ET0 693 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-209ENST00000521559 TBCELQ5QJ74 424 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 CFAP70Q5T0N1 1121 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 GOLGA6L1Q8N7Z2 621 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 WHAMMQ8TF30 809 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 SCARF2Q96GP6 870 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-209ENST00000521559 ABHD17AQ96GS6 310 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 ATAD2Q6PL18 1390 aa6.42□□□□□ -1.38
VPS13B-209ENST00000521559 FAM157BP0CG42 384 aa6.41□□□□□ -1.38
VPS13B-209ENST00000521559 FAM182BQ5T319 152 aa6.41□□□□□ -1.38
VPS13B-209ENST00000521559 NEDD1Q8NHV4 660 aa6.41□□□□□ -1.38
VPS13B-209ENST00000521559 RHPN1Q8TCX5 695 aa6.41□□□□□ -1.38
VPS13B-209ENST00000521559 ACDQ96AP0 544 aa6.41□□□□□ -1.38
VPS13B-209ENST00000521559 KLRG1Q96E93 195 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms