RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
TRAPPC9-209ENST00000521167 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-209ENST00000521167 SIPA1L3O60292 1781 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-209ENST00000521167 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 NEFMP07197 916 aa13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 TRAPPC3LQ5T215 181 aa13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 AMIGO3Q86WK7 504 aa13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 TJP1Q07157 1748 aa13.84□□□□□ -0.19
TRAPPC9-209ENST00000521167 PHF14O94880 888 aa13.83□□□□□ -0.2
TRAPPC9-209ENST00000521167 SLC39A6Q13433 755 aa13.83□□□□□ -0.2
TRAPPC9-209ENST00000521167 DLG5Q8TDM6 1919 aa13.83□□□□□ -0.2
TRAPPC9-209ENST00000521167 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-209ENST00000521167 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
TRAPPC9-209ENST00000521167 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.2
TRAPPC9-209ENST00000521167 TTC5Q8N0Z6 440 aa13.82□□□□□ -0.2
TRAPPC9-209ENST00000521167 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-209ENST00000521167 CRKLP46109 303 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-209ENST00000521167 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
TRAPPC9-209ENST00000521167 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 MSL1Q68DK7 614 aa13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 MIER1Q8N108 512 aa13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 PLEKHF1Q96S99 279 aa13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-209ENST00000521167 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-209ENST00000521167 RFC4P35249 363 aa13.79□□□□□ -0.2
TRAPPC9-209ENST00000521167 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-209ENST00000521167 NLGN1Q8N2Q7 840 aa13.79□□□□□ -0.2
TRAPPC9-209ENST00000521167 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-209ENST00000521167 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
TRAPPC9-209ENST00000521167 BTBD11A6QL63 1104 aa13.78□□□□□ -0.2
TRAPPC9-209ENST00000521167 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
TRAPPC9-209ENST00000521167 STARD3NLO95772 234 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 C4AP0C0L4 1744 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 CHD4Q14839 1912 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 MCM10Q7L590 875 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.21
TRAPPC9-209ENST00000521167 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
TRAPPC9-209ENST00000521167 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-209ENST00000521167 TAF7Q15545 349 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-209ENST00000521167 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
TRAPPC9-209ENST00000521167 GYS1P13807 737 aa13.75□□□□□ -0.21
TRAPPC9-209ENST00000521167 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-209ENST00000521167 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
TRAPPC9-209ENST00000521167 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-209ENST00000521167 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 KCNQ3O43525 872 aa13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 ZPR1O75312 459 aa13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 MMP10P09238 476 aa13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 ZBTB1Q9Y2K1 713 aa13.73□□□□□ -0.21
TRAPPC9-209ENST00000521167 KIF13BQ9NQT8 1826 aa13.72□□□□□ -0.21
TRAPPC9-209ENST00000521167 A0A087WZG4 1122 aa13.72□□□□□ -0.21
TRAPPC9-209ENST00000521167 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-209ENST00000521167 EIF5P55010 431 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-209ENST00000521167 GPR162Q16538 588 aa13.72□□□□□ -0.21
TRAPPC9-209ENST00000521167 PARP3Q9Y6F1 533 aa13.72□□□□□ -0.21
TRAPPC9-209ENST00000521167 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-209ENST00000521167 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-209ENST00000521167 RIPK4P57078 832 aa13.71□□□□□ -0.21
TRAPPC9-209ENST00000521167 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-209ENST00000521167 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
TRAPPC9-209ENST00000521167 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.22
TRAPPC9-209ENST00000521167 COL15A1P39059 1388 aa13.71□□□□□ -0.22
TRAPPC9-209ENST00000521167 TM4SF1P30408 202 aa13.7□□□□□ -0.22
TRAPPC9-209ENST00000521167 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-209ENST00000521167 LMOD3Q0VAK6 560 aa13.7□□□□□ -0.22
TRAPPC9-209ENST00000521167 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
TRAPPC9-209ENST00000521167 RUNDC1Q96C34 613 aa13.7□□□□□ -0.22
TRAPPC9-209ENST00000521167 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
TRAPPC9-209ENST00000521167 GRIN3BO60391 1043 aa13.69□□□□□ -0.22
TRAPPC9-209ENST00000521167 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
TRAPPC9-209ENST00000521167 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-209ENST00000521167 BABAM1Q9NWV8 329 aa13.69□□□□□ -0.22
TRAPPC9-209ENST00000521167 USP16Q9Y5T5 823 aa13.69□□□□□ -0.22
TRAPPC9-209ENST00000521167 A1BGP04217 495 aa13.68□□□□□ -0.22
TRAPPC9-209ENST00000521167 TGFB2P61812 414 aa13.68□□□□□ -0.22
TRAPPC9-209ENST00000521167 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
TRAPPC9-209ENST00000521167 AFDNP55196 1824 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-209ENST00000521167 YY1P25490 414 aa13.67□□□□□ -0.22
TRAPPC9-209ENST00000521167 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
TRAPPC9-209ENST00000521167 THUMPD2Q9BTF0 503 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-209ENST00000521167 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-209ENST00000521167 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-209ENST00000521167 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-209ENST00000521167 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
TRAPPC9-209ENST00000521167 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-209ENST00000521167 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms