RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	RHOQ	P17081	205 aa		6.27	□□□□□ -1.41
EFCAB13-208	ENST00000520776	MFAP1	P55081	439 aa	Known RBP	6.27	□□□□□ -1.41
EFCAB13-208	ENST00000520776	LBR	Q14739	615 aa	Known RBP	6.27	□□□□□ -1.41
EFCAB13-208	ENST00000520776	GNAS	Q5JWF2	1037 aa		6.27	□□□□□ -1.41
EFCAB13-208	ENST00000520776	CLP1	Q92989	425 aa	Known RBP	6.27	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ATP1A2	P50993	1020 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	CENPC	Q03188	943 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	POU4F2	Q12837	409 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	TXNDC2	Q86VQ3	553 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SIX5	Q8N196	739 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ZNF594	Q96JF6	807 aa	Predicted RBP	6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	TIMMDC1	Q9NPL8	285 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776		A0A1B0GTH6	734 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	F11	P03951	625 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	GTF2I	P78347	998 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	RNFT1	Q5M7Z0	435 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	NPM2	Q86SE8	214 aa	Known RBP	6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	TRERF1	Q96PN7	1200 aa		6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.26	□□□□□ -1.41
EFCAB13-208	ENST00000520776	B4GALNT3	Q6L9W6	998 aa		6.25	□□□□□ -1.41
EFCAB13-208	ENST00000520776	RAB6B	Q9NRW1	208 aa		6.25	□□□□□ -1.41
EFCAB13-208	ENST00000520776	MBIP	Q9NS73	344 aa		6.25	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SWI5	Q1ZZU3	235 aa		6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	CCDC102B	Q68D86	513 aa		6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	RIPOR1	Q6ZS17	1223 aa		6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	RHBDD1	Q8TEB9	315 aa		6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	NSFL1C	Q9UNZ2	370 aa	Known RBP	6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	MTMR7	Q9Y216	660 aa		6.24	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SFI1	A8K8P3	1242 aa		6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SEC13	P55735	322 aa		6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ZNF385C	Q66K41	422 aa	Predicted RBP	6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	TMEM214	Q6NUQ4	689 aa	Known RBP	6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	PPARGC1B	Q86YN6	1023 aa	Known RBP	6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SVOP	Q8N4V2	548 aa		6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	GAS2L1	Q99501	681 aa	Predicted RBP	6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	NUCKS1	Q9H1E3	243 aa	Known RBP	6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ETNK1	Q9HBU6	452 aa		6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	LRRC4B	Q9NT99	713 aa		6.23	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ADAMTS2	O95450	1211 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ATP2B4	P23634	1241 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	ARID4A	P29374	1257 aa	Predicted RBP	6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	KCNMA1	Q12791	1236 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	GAS6	Q14393	721 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	TLR1	Q15399	786 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	DBN1	Q16643	649 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SND1	Q7KZF4	910 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	PHF24	Q9UPV7	400 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	INHA	P05111	366 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	SCNN1A	P37088	669 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	MAP3K10	Q02779	954 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	TPCN2	Q8NHX9	752 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	C1orf216	Q8TAB5	229 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	CCER1	Q8TC90	406 aa	Predicted RBP	6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	CFHR5	Q9BXR6	569 aa		6.22	□□□□□ -1.41
EFCAB13-208	ENST00000520776	GDF10	P55107	478 aa		6.21	□□□□□ -1.42
EFCAB13-208	ENST00000520776	ENAM	Q9NRM1	1142 aa		6.21	□□□□□ -1.42
EFCAB13-208	ENST00000520776	ARHGEF15	O94989	841 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	SCNN1D	P51172	638 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	OCLN	Q16625	522 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	PGBD3	Q8N328	593 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	ADAMTS8	Q9UP79	889 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	MAP2K3	P46734	347 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	C4orf17	Q53FE4	359 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	GTPBP3	Q969Y2	492 aa	Known RBP	6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	PRIMPOL	Q96LW4	560 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	CRISPLD1	Q9H336	500 aa		6.2	□□□□□ -1.42
EFCAB13-208	ENST00000520776	PRMT3	O60678	531 aa		6.19	□□□□□ -1.42
EFCAB13-208	ENST00000520776	PSME1	Q06323	249 aa		6.19	□□□□□ -1.42
EFCAB13-208	ENST00000520776	EFHC2	Q5JST6	749 aa		6.19	□□□□□ -1.42
EFCAB13-208	ENST00000520776	SLC4A9	Q96Q91	983 aa		6.19	□□□□□ -1.42
EFCAB13-208	ENST00000520776	BACH1	O14867	736 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	LGR5	O75473	907 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	MX2	P20592	715 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	SMTN	P53814	917 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	MTFR1	Q15390	333 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	CCDC27	Q2M243	656 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	SCARF2	Q96GP6	870 aa	Predicted RBP	6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	NIFK	Q9BYG3	293 aa	Known RBP	6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	RBM19	Q9Y4C8	960 aa	Known RBP	6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	IGF1R	P08069	1367 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	TMEM229A	B2RXF0	380 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776		M0R2N6	131 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	FIGNL1	Q6PIW4	674 aa		6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.18	□□□□□ -1.42
EFCAB13-208	ENST00000520776	CELA2B	P08218	269 aa	Predicted RBP	6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	MSX1	P28360	303 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	WEE1	P30291	646 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	SERPINB4	P48594	390 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	KANK3	Q6NY19	840 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	TSEN2	Q8NCE0	465 aa	Known RBP	6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	WHAMM	Q8TF30	809 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	HINFP	Q9BQA5	517 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	ZDHHC3	Q9NYG2	299 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	GPR25	O00155	361 aa		6.17	□□□□□ -1.42
EFCAB13-208	ENST00000520776	CDK2AP1	O14519	115 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms