RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 ZPR1O75312 459 aa19.01■□□□□ 0.63
R3HCC1-206ENST00000520480 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
R3HCC1-206ENST00000520480 PRKRIP1Q9H875 184 aaPredicted RBP19.01■□□□□ 0.63
R3HCC1-206ENST00000520480 ZBTB1Q9Y2K1 713 aa19.01■□□□□ 0.63
R3HCC1-206ENST00000520480 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
R3HCC1-206ENST00000520480 PARP3Q9Y6F1 533 aa19■□□□□ 0.63
R3HCC1-206ENST00000520480 COL15A1P39059 1388 aa19■□□□□ 0.63
R3HCC1-206ENST00000520480 CHD4Q14839 1912 aa19■□□□□ 0.63
R3HCC1-206ENST00000520480 KCNQ3O43525 872 aa18.99■□□□□ 0.63
R3HCC1-206ENST00000520480 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
R3HCC1-206ENST00000520480 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
R3HCC1-206ENST00000520480 NARFQ9UHQ1 456 aa18.99■□□□□ 0.63
R3HCC1-206ENST00000520480 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
R3HCC1-206ENST00000520480 FKBP8Q14318 412 aa18.98■□□□□ 0.63
R3HCC1-206ENST00000520480 A0A087WZG4 1122 aa18.97■□□□□ 0.63
R3HCC1-206ENST00000520480 GRIN3BO60391 1043 aa18.97■□□□□ 0.63
R3HCC1-206ENST00000520480 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
R3HCC1-206ENST00000520480 USPL1Q5W0Q7 1092 aa18.97■□□□□ 0.63
R3HCC1-206ENST00000520480 PNISRQ8TF01 805 aaKnown RBP18.97■□□□□ 0.63
R3HCC1-206ENST00000520480 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
R3HCC1-206ENST00000520480 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
R3HCC1-206ENST00000520480 C10orf71Q711Q0 1435 aa18.95■□□□□ 0.62
R3HCC1-206ENST00000520480 YBX3P16989 372 aaKnown RBP eCLIP18.95■□□□□ 0.62
R3HCC1-206ENST00000520480 IL6STP40189 918 aaPredicted RBP18.95■□□□□ 0.62
R3HCC1-206ENST00000520480 TGFB2P61812 414 aa18.94■□□□□ 0.62
R3HCC1-206ENST00000520480 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
R3HCC1-206ENST00000520480 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 ZNF316A6NFI3 1004 aaPredicted RBP18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 TM4SF1P30408 202 aa18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 RIPK4P57078 832 aa18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 DDR1Q08345 913 aa18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 LMOD3Q0VAK6 560 aa18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
R3HCC1-206ENST00000520480 PXDNLA1KZ92 1463 aa18.92■□□□□ 0.62
R3HCC1-206ENST00000520480 A1BGP04217 495 aa18.92■□□□□ 0.62
R3HCC1-206ENST00000520480 TMPOP42166 694 aaKnown RBP18.92■□□□□ 0.62
R3HCC1-206ENST00000520480 THUMPD2Q9BTF0 503 aaKnown RBP18.92■□□□□ 0.62
R3HCC1-206ENST00000520480 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
R3HCC1-206ENST00000520480 USP16Q9Y5T5 823 aa18.92■□□□□ 0.62
R3HCC1-206ENST00000520480 POLRMTO00411 1230 aaKnown RBP18.91■□□□□ 0.62
R3HCC1-206ENST00000520480 RUNDC1Q96C34 613 aa18.91■□□□□ 0.62
R3HCC1-206ENST00000520480 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
R3HCC1-206ENST00000520480 SCN7AQ01118 1682 aa18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 PRAMEF22A3QJZ6 481 aa18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 NFIXQ14938 502 aa18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 BCL2L12Q9HB09 334 aa18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 N4BP2Q86UW6 1770 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-206ENST00000520480 LAMB4A4D0S4 1761 aa18.89■□□□□ 0.61
R3HCC1-206ENST00000520480 TBC1D2BQ9UPU7 963 aa18.89■□□□□ 0.61
R3HCC1-206ENST00000520480 A0A0G2JLW4 131 aa18.88■□□□□ 0.61
R3HCC1-206ENST00000520480 DPEP1P16444 411 aa18.87■□□□□ 0.61
R3HCC1-206ENST00000520480 AFDNP55196 1824 aaKnown RBP18.87■□□□□ 0.61
R3HCC1-206ENST00000520480 EIF4A1P60842 406 aaKnown RBP18.87■□□□□ 0.61
R3HCC1-206ENST00000520480 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
R3HCC1-206ENST00000520480 WWC3Q9ULE0 1092 aa18.87■□□□□ 0.61
R3HCC1-206ENST00000520480 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
R3HCC1-206ENST00000520480 NRXN2Q9P2S2 1712 aa18.86■□□□□ 0.61
R3HCC1-206ENST00000520480 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
R3HCC1-206ENST00000520480 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
R3HCC1-206ENST00000520480 DZIP3Q86Y13 1208 aaKnown RBP18.86■□□□□ 0.61
R3HCC1-206ENST00000520480 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
R3HCC1-206ENST00000520480 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 SERPINB2P05120 415 aa18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 BRCA1P38398 1863 aaKnown RBP18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 BCORQ6W2J9 1755 aa18.85■□□□□ 0.61
R3HCC1-206ENST00000520480 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
R3HCC1-206ENST00000520480 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
R3HCC1-206ENST00000520480 BICDL1Q6ZP65 573 aa18.84■□□□□ 0.61
R3HCC1-206ENST00000520480 ZNF784Q8NCA9 323 aaPredicted RBP18.83■□□□□ 0.6
R3HCC1-206ENST00000520480 PIM2Q9P1W9 311 aa18.83■□□□□ 0.6
R3HCC1-206ENST00000520480 BCS1LQ9Y276 419 aa18.83■□□□□ 0.6
R3HCC1-206ENST00000520480 ZNF652Q9Y2D9 606 aa18.83■□□□□ 0.6
R3HCC1-206ENST00000520480 CARMIL3Q8ND23 1372 aa18.82■□□□□ 0.6
R3HCC1-206ENST00000520480 RGL2O15211 777 aa18.82■□□□□ 0.6
R3HCC1-206ENST00000520480 KCNA3P22001 575 aa18.82■□□□□ 0.6
R3HCC1-206ENST00000520480 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
R3HCC1-206ENST00000520480 SETDB2Q96T68 719 aa18.82■□□□□ 0.6
R3HCC1-206ENST00000520480 TRIM35Q9UPQ4 493 aa18.82■□□□□ 0.6
R3HCC1-206ENST00000520480 ANP32CO43423 234 aa18.8■□□□□ 0.6
R3HCC1-206ENST00000520480 CHRNA5P30532 468 aa18.8■□□□□ 0.6
R3HCC1-206ENST00000520480 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
R3HCC1-206ENST00000520480 ARFGEF1Q9Y6D6 1849 aa18.79■□□□□ 0.6
R3HCC1-206ENST00000520480 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
R3HCC1-206ENST00000520480 CHL1O00533 1208 aa18.78■□□□□ 0.6
R3HCC1-206ENST00000520480 DLEC1Q9Y238 1755 aa18.78■□□□□ 0.6
R3HCC1-206ENST00000520480 H0YIN7 160 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 APAF1O14727 1248 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 NPHP1O15259 732 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 PRR5LQ6MZQ0 368 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 BRIP1Q9BX63 1249 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 LAS1LQ9Y4W2 734 aaKnown RBP18.77■□□□□ 0.6
R3HCC1-206ENST00000520480 MYL6BP14649 208 aa18.76■□□□□ 0.59
R3HCC1-206ENST00000520480 PDE6BP35913 854 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms