RNA–Protein interactions for RNA: ENST00000520264.1

TRIM17-208, Transcript of tripartite motif containing 17, humanhuman

TSL 4

Gene TRIM17, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-208ENST00000520264 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 WBP1LQ9NX94 342 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 ADAMTSL1Q8N6G6 1762 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 SCN4AP35499 1836 aa16.27■□□□□ 0.2
TRIM17-208ENST00000520264 RASSF7Q02833 373 aa16.27■□□□□ 0.2
TRIM17-208ENST00000520264 MPRIPQ6WCQ1 1025 aa16.27■□□□□ 0.2
TRIM17-208ENST00000520264 PIM2Q9P1W9 311 aa16.27■□□□□ 0.2
TRIM17-208ENST00000520264 NRXN2Q9P2S2 1712 aa16.27■□□□□ 0.19
TRIM17-208ENST00000520264 DALRD3Q5D0E6 543 aaKnown RBP16.26■□□□□ 0.19
TRIM17-208ENST00000520264 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
TRIM17-208ENST00000520264 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
TRIM17-208ENST00000520264 ITPK1Q13572 414 aa16.25■□□□□ 0.19
TRIM17-208ENST00000520264 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
TRIM17-208ENST00000520264 KDRP35968 1356 aa16.25■□□□□ 0.19
TRIM17-208ENST00000520264 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
TRIM17-208ENST00000520264 CCDC85CA6NKD9 419 aa16.24■□□□□ 0.19
TRIM17-208ENST00000520264 ANP32CO43423 234 aa16.24■□□□□ 0.19
TRIM17-208ENST00000520264 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
TRIM17-208ENST00000520264 VEGFBP49765 207 aa16.24■□□□□ 0.19
TRIM17-208ENST00000520264 SIK1P57059 783 aa16.24■□□□□ 0.19
TRIM17-208ENST00000520264 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRIM17-208ENST00000520264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRIM17-208ENST00000520264 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
TRIM17-208ENST00000520264 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
TRIM17-208ENST00000520264 PASKQ96RG2 1323 aa16.22■□□□□ 0.19
TRIM17-208ENST00000520264 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
TRIM17-208ENST00000520264 CYP27B1O15528 508 aa16.22■□□□□ 0.19
TRIM17-208ENST00000520264 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
TRIM17-208ENST00000520264 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
TRIM17-208ENST00000520264 CACNA1SQ13698 1873 aa16.22■□□□□ 0.19
TRIM17-208ENST00000520264 GYS1P13807 737 aa16.21■□□□□ 0.19
TRIM17-208ENST00000520264 LMNB1P20700 586 aa16.21■□□□□ 0.19
TRIM17-208ENST00000520264 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
TRIM17-208ENST00000520264 PIGBQ92521 554 aa16.21■□□□□ 0.19
TRIM17-208ENST00000520264 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
TRIM17-208ENST00000520264 POTEJP0CG39 1038 aa16.2■□□□□ 0.18
TRIM17-208ENST00000520264 PHKG2P15735 406 aa16.2■□□□□ 0.18
TRIM17-208ENST00000520264 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
TRIM17-208ENST00000520264 COL11A2P13942 1736 aaPredicted RBP16.19■□□□□ 0.18
TRIM17-208ENST00000520264 TJP1Q07157 1748 aa16.19■□□□□ 0.18
TRIM17-208ENST00000520264 ANKRD31Q8N7Z5 1873 aa16.19■□□□□ 0.18
TRIM17-208ENST00000520264 NEFMP07197 916 aa16.19■□□□□ 0.18
TRIM17-208ENST00000520264 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
TRIM17-208ENST00000520264 CHRNA5P30532 468 aa16.19■□□□□ 0.18
TRIM17-208ENST00000520264 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
TRIM17-208ENST00000520264 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
TRIM17-208ENST00000520264 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
TRIM17-208ENST00000520264 WDR43Q15061 677 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM17-208ENST00000520264 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
TRIM17-208ENST00000520264 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
TRIM17-208ENST00000520264 SCN11AQ9UI33 1791 aa16.16■□□□□ 0.18
TRIM17-208ENST00000520264 DDR1Q08345 913 aa16.16■□□□□ 0.18
TRIM17-208ENST00000520264 PNNQ9H307 717 aaKnown RBP16.16■□□□□ 0.18
TRIM17-208ENST00000520264 ADRA2BP18089 450 aa16.15■□□□□ 0.18
TRIM17-208ENST00000520264 NKX1-1Q15270 411 aaPredicted RBP16.15■□□□□ 0.18
TRIM17-208ENST00000520264 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
TRIM17-208ENST00000520264 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
TRIM17-208ENST00000520264 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
TRIM17-208ENST00000520264 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
TRIM17-208ENST00000520264 NFKBIEO00221 500 aa16.14■□□□□ 0.17
TRIM17-208ENST00000520264 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
TRIM17-208ENST00000520264 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
TRIM17-208ENST00000520264 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
TRIM17-208ENST00000520264 RASSF10A6NK89 507 aa16.13■□□□□ 0.17
TRIM17-208ENST00000520264 TMOD3Q9NYL9 352 aa16.13■□□□□ 0.17
TRIM17-208ENST00000520264 ASAP1Q9ULH1 1129 aa16.13■□□□□ 0.17
TRIM17-208ENST00000520264 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
TRIM17-208ENST00000520264 CABP4P57796 275 aa16.12■□□□□ 0.17
TRIM17-208ENST00000520264 CNTNAP4Q9C0A0 1308 aa16.12■□□□□ 0.17
TRIM17-208ENST00000520264 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
TRIM17-208ENST00000520264 TMEM88BA6NKF7 163 aa16.11■□□□□ 0.17
TRIM17-208ENST00000520264 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
TRIM17-208ENST00000520264 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
TRIM17-208ENST00000520264 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
TRIM17-208ENST00000520264 ERVV-2B6SEH9 535 aa16.1■□□□□ 0.17
TRIM17-208ENST00000520264 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
TRIM17-208ENST00000520264 MRS2Q9HD23 443 aa16.1■□□□□ 0.17
TRIM17-208ENST00000520264 ITGBL1O95965 494 aaPredicted RBP16.09■□□□□ 0.17
TRIM17-208ENST00000520264 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
TRIM17-208ENST00000520264 RFC4P35249 363 aa16.08■□□□□ 0.16
TRIM17-208ENST00000520264 FKBP8Q14318 412 aa16.08■□□□□ 0.16
TRIM17-208ENST00000520264 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
TRIM17-208ENST00000520264 ATG3Q9NT62 314 aa16.08■□□□□ 0.16
TRIM17-208ENST00000520264 WDR33Q9C0J8 1336 aaKnown RBP16.08■□□□□ 0.16
TRIM17-208ENST00000520264 USP42Q9H9J4 1324 aaKnown RBP16.08■□□□□ 0.16
TRIM17-208ENST00000520264 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
TRIM17-208ENST00000520264 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
TRIM17-208ENST00000520264 PRPF38BQ5VTL8 546 aaKnown RBP16.07■□□□□ 0.16
TRIM17-208ENST00000520264 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
TRIM17-208ENST00000520264 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
TRIM17-208ENST00000520264 MCOLN1Q9GZU1 580 aa16.07■□□□□ 0.16
TRIM17-208ENST00000520264 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 TEFQ10587 303 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 PLEKHF1Q96S99 279 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
TRIM17-208ENST00000520264 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms