RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ATP10AO60312 1499 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 POM121CA8CG34 1229 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 H3BM21 787 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 CCER2I3L3R5 266 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-212ENST00000519622 NR1H3Q13133 447 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 VASH1Q7L8A9 365 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-212ENST00000519622 TRMT44Q8IYL2 757 aaKnown RBP6.38□□□□□ -1.39
PABPC1-212ENST00000519622 ADAM32Q8TC27 787 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 TRAPPC8Q9Y2L5 1435 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 PLEKHH2Q8IVE3 1493 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 DUOX2Q9NRD8 1548 aa6.38□□□□□ -1.39
PABPC1-212ENST00000519622 A2MP01023 1474 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 PLEKHD1A6NEE1 506 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 ZBTB33Q86T24 672 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 SLC16A10Q8TF71 515 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 TRIM52Q96A61 297 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 GPSM3Q9Y4H4 160 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 MAP4K5Q9Y4K4 846 aa6.37□□□□□ -1.39
PABPC1-212ENST00000519622 PRDM15P57071 1507 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-212ENST00000519622 ERBINQ96RT1 1412 aa6.36□□□□□ -1.39
PABPC1-212ENST00000519622 HNRNPMP52272 730 aaKnown RBP eCLIP6.36□□□□□ -1.39
PABPC1-212ENST00000519622 INSM1Q01101 510 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-212ENST00000519622 WWC1Q8IX03 1113 aa6.36□□□□□ -1.39
PABPC1-212ENST00000519622 NPAS3Q8IXF0 933 aa6.36□□□□□ -1.39
PABPC1-212ENST00000519622 MEIOBQ8N635 442 aa6.36□□□□□ -1.39
PABPC1-212ENST00000519622 ZNF330Q9Y3S2 320 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-212ENST00000519622 PCDHB9Q9Y5E1 797 aa6.36□□□□□ -1.39
PABPC1-212ENST00000519622 MADDQ8WXG6 1647 aa6.36□□□□□ -1.39
PABPC1-212ENST00000519622 WDR7Q9Y4E6 1490 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 PRAG1Q86YV5 1406 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 KIF7Q2M1P5 1343 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 TRAK2O60296 914 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 BMP2P12643 396 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 CBLBQ13191 982 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 WASHC4Q2M389 1173 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 CCDC116Q8IYX3 515 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 LINC00528Q8N1L1 170 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 STK17AQ9UEE5 414 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 SPHKAPQ2M3C7 1700 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 IQGAP1P46940 1657 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 CLTCL1P53675 1640 aa6.35□□□□□ -1.39
PABPC1-212ENST00000519622 EIF2AK4Q9P2K8 1649 aaKnown RBP6.35□□□□□ -1.39
PABPC1-212ENST00000519622 KIDINS220Q9ULH0 1771 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 NUP155O75694 1391 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 GPRASP1Q5JY77 1395 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 CEP152O94986 1710 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 IFT172Q9UG01 1749 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 TET3O43151 1660 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 CCDC184Q52MB2 194 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 PPP1R26Q5T8A7 1209 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-212ENST00000519622 IRF7Q92985 503 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 SLC10A4Q96EP9 437 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 DNMT3LQ9UJW3 386 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 ZNF777Q9ULD5 760 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-212ENST00000519622 SUPT16HQ9Y5B9 1047 aaKnown RBP6.34□□□□□ -1.39
PABPC1-212ENST00000519622 FRMPD1Q5SYB0 1578 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 TRPM2O94759 1503 aa6.34□□□□□ -1.39
PABPC1-212ENST00000519622 USP47Q96K76 1375 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 SOS2Q07890 1332 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-212ENST00000519622 NEURL4Q96JN8 1562 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 MAN1A2O60476 641 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 DZIP3Q86Y13 1208 aaKnown RBP6.33□□□□□ -1.4
PABPC1-212ENST00000519622 KCTD15Q96SI1 283 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-212ENST00000519622 EMILIN1Q9Y6C2 1016 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 ATP7AQ04656 1500 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 RTEL1-TNFRSF6BF6WH68 1400 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 PTPRTO14522 1441 aa6.33□□□□□ -1.4
PABPC1-212ENST00000519622 EIF4G2P78344 907 aaKnown RBP eCLIP6.32□□□□□ -1.4
PABPC1-212ENST00000519622 ERICH6Q7L0X2 663 aa6.32□□□□□ -1.4
PABPC1-212ENST00000519622 ADAMTS19Q8TE59 1207 aa6.32□□□□□ -1.4
PABPC1-212ENST00000519622 MROH2AA6NES4 1674 aa6.32□□□□□ -1.4
PABPC1-212ENST00000519622 MYOM1P52179 1685 aa6.31□□□□□ -1.4
PABPC1-212ENST00000519622 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
PABPC1-212ENST00000519622 COL17A1Q9UMD9 1497 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-212ENST00000519622 PPFIA3O75145 1194 aa6.31□□□□□ -1.4
PABPC1-212ENST00000519622 Q6ZVU0 165 aa6.31□□□□□ -1.4
PABPC1-212ENST00000519622 GLMNQ92990 594 aa6.31□□□□□ -1.4
PABPC1-212ENST00000519622 LMTK2Q8IWU2 1503 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 FIGNL2A6NMB9 653 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 UPP2O95045 317 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 RAB15P59190 212 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 INTS6LQ5JSJ4 861 aaKnown RBP6.3□□□□□ -1.4
PABPC1-212ENST00000519622 AGBL1Q96MI9 1066 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
PABPC1-212ENST00000519622 ALG2Q9H553 416 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 ASXL2Q76L83 1435 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 EFCAB6Q5THR3 1501 aa6.3□□□□□ -1.4
PABPC1-212ENST00000519622 ABCA6Q8N139 1617 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 VSIG8P0DPA2 414 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 SEMA3FQ13275 785 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 HDGFL1Q5TGJ6 251 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 ZSCAN1Q8NBB4 408 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 PRKRIP1Q9H875 184 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-212ENST00000519622 TMPRSS4Q9NRS4 437 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 KIAA1210Q9ULL0 1709 aa6.29□□□□□ -1.4
PABPC1-212ENST00000519622 FANCAO15360 1455 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 UGGT1Q9NYU2 1555 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 HECW2Q9P2P5 1572 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 TTLL8A6PVC2 850 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms