RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 MCM10Q7L590 875 aa16.87■□□□□ 0.29
MCPH1-202ENST00000519221 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
MCPH1-202ENST00000519221 PARP3Q9Y6F1 533 aa16.87■□□□□ 0.29
MCPH1-202ENST00000519221 COL15A1P39059 1388 aa16.87■□□□□ 0.29
MCPH1-202ENST00000519221 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
MCPH1-202ENST00000519221 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
MCPH1-202ENST00000519221 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
MCPH1-202ENST00000519221 NARFQ9UHQ1 456 aa16.86■□□□□ 0.29
MCPH1-202ENST00000519221 KIAA1551Q9HCM1 1747 aa16.86■□□□□ 0.29
MCPH1-202ENST00000519221 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
MCPH1-202ENST00000519221 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
MCPH1-202ENST00000519221 A0A087WZG4 1122 aa16.85■□□□□ 0.29
MCPH1-202ENST00000519221 TGFB2P61812 414 aa16.85■□□□□ 0.29
MCPH1-202ENST00000519221 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
MCPH1-202ENST00000519221 YBX3P16989 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
MCPH1-202ENST00000519221 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
MCPH1-202ENST00000519221 FKBP8Q14318 412 aa16.84■□□□□ 0.29
MCPH1-202ENST00000519221 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
MCPH1-202ENST00000519221 N4BP2Q86UW6 1770 aaPredicted RBP16.84■□□□□ 0.29
MCPH1-202ENST00000519221 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
MCPH1-202ENST00000519221 BRCA1P38398 1863 aaKnown RBP16.84■□□□□ 0.29
MCPH1-202ENST00000519221 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
MCPH1-202ENST00000519221 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
MCPH1-202ENST00000519221 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
MCPH1-202ENST00000519221 USPL1Q5W0Q7 1092 aa16.83■□□□□ 0.28
MCPH1-202ENST00000519221 KDM3BQ7LBC6 1761 aa16.83■□□□□ 0.28
MCPH1-202ENST00000519221 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
MCPH1-202ENST00000519221 KCNQ3O43525 872 aa16.82■□□□□ 0.28
MCPH1-202ENST00000519221 SNRPA1P09661 255 aaKnown RBP16.82■□□□□ 0.28
MCPH1-202ENST00000519221 TM4SF1P30408 202 aa16.82■□□□□ 0.28
MCPH1-202ENST00000519221 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
MCPH1-202ENST00000519221 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
MCPH1-202ENST00000519221 DDR1Q08345 913 aa16.81■□□□□ 0.28
MCPH1-202ENST00000519221 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
MCPH1-202ENST00000519221 LAMB4A4D0S4 1761 aa16.81■□□□□ 0.28
MCPH1-202ENST00000519221 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
MCPH1-202ENST00000519221 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
MCPH1-202ENST00000519221 ARFGEF1Q9Y6D6 1849 aa16.8■□□□□ 0.28
MCPH1-202ENST00000519221 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
MCPH1-202ENST00000519221 NFIXQ14938 502 aa16.79■□□□□ 0.28
MCPH1-202ENST00000519221 BCL2L12Q9HB09 334 aa16.79■□□□□ 0.28
MCPH1-202ENST00000519221 A1BGP04217 495 aa16.78■□□□□ 0.28
MCPH1-202ENST00000519221 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
MCPH1-202ENST00000519221 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
MCPH1-202ENST00000519221 BCORQ6W2J9 1755 aa16.78■□□□□ 0.28
MCPH1-202ENST00000519221 ZNF784Q8NCA9 323 aaPredicted RBP16.77■□□□□ 0.28
MCPH1-202ENST00000519221 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
MCPH1-202ENST00000519221 DPEP1P16444 411 aa16.76■□□□□ 0.27
MCPH1-202ENST00000519221 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
MCPH1-202ENST00000519221 RIPK4P57078 832 aa16.76■□□□□ 0.27
MCPH1-202ENST00000519221 ZNF330Q9Y3S2 320 aaPredicted RBP16.76■□□□□ 0.27
MCPH1-202ENST00000519221 RGL2O15211 777 aa16.75■□□□□ 0.27
MCPH1-202ENST00000519221 SERPINB2P05120 415 aa16.75■□□□□ 0.27
MCPH1-202ENST00000519221 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
MCPH1-202ENST00000519221 BABAM1Q9NWV8 329 aa16.75■□□□□ 0.27
MCPH1-202ENST00000519221 MIS18AQ9NYP9 233 aa16.75■□□□□ 0.27
MCPH1-202ENST00000519221 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
MCPH1-202ENST00000519221 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
MCPH1-202ENST00000519221 PRAMEF22A3QJZ6 481 aa16.74■□□□□ 0.27
MCPH1-202ENST00000519221 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
MCPH1-202ENST00000519221 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
MCPH1-202ENST00000519221 THUMPD2Q9BTF0 503 aaKnown RBP16.74■□□□□ 0.27
MCPH1-202ENST00000519221 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
MCPH1-202ENST00000519221 GIGYF1O75420 1035 aaPredicted RBP16.73■□□□□ 0.27
MCPH1-202ENST00000519221 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
MCPH1-202ENST00000519221 KCNA3P22001 575 aa16.73■□□□□ 0.27
MCPH1-202ENST00000519221 BCS1LQ9Y276 419 aa16.73■□□□□ 0.27
MCPH1-202ENST00000519221 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
MCPH1-202ENST00000519221 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
MCPH1-202ENST00000519221 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
MCPH1-202ENST00000519221 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
MCPH1-202ENST00000519221 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
MCPH1-202ENST00000519221 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
MCPH1-202ENST00000519221 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
MCPH1-202ENST00000519221 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
MCPH1-202ENST00000519221 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
MCPH1-202ENST00000519221 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
MCPH1-202ENST00000519221 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
MCPH1-202ENST00000519221 ADCY9O60503 1353 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
MCPH1-202ENST00000519221 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
MCPH1-202ENST00000519221 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 NUP98P52948 1817 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
MCPH1-202ENST00000519221 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
MCPH1-202ENST00000519221 CHRNA5P30532 468 aa16.68■□□□□ 0.26
MCPH1-202ENST00000519221 RRP7AQ9Y3A4 280 aaKnown RBP16.68■□□□□ 0.26
MCPH1-202ENST00000519221 PDE6BP35913 854 aa16.67■□□□□ 0.26
MCPH1-202ENST00000519221 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
MCPH1-202ENST00000519221 PRR5LQ6MZQ0 368 aa16.67■□□□□ 0.26
MCPH1-202ENST00000519221 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
MCPH1-202ENST00000519221 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
MCPH1-202ENST00000519221 SBF1O95248 1867 aa16.67■□□□□ 0.26
MCPH1-202ENST00000519221 H0YIN7 160 aa16.66■□□□□ 0.26
MCPH1-202ENST00000519221 ARHGAP27Q6ZUM4 889 aa16.66■□□□□ 0.26
MCPH1-202ENST00000519221 CNBD1Q8NA66 436 aa16.66■□□□□ 0.26
MCPH1-202ENST00000519221 ATP10DQ9P241 1426 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms