RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 WDR43Q15061 677 aaKnown RBP eCLIP17.47■□□□□ 0.39
TMEM55A-203ENST00000518869 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
TMEM55A-203ENST00000518869 IL6STP40189 918 aaPredicted RBP17.46■□□□□ 0.39
TMEM55A-203ENST00000518869 USPL1Q5W0Q7 1092 aa17.46■□□□□ 0.39
TMEM55A-203ENST00000518869 PLEKHF1Q96S99 279 aa17.46■□□□□ 0.39
TMEM55A-203ENST00000518869 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
TMEM55A-203ENST00000518869 KCPQ6ZWJ8 1503 aa17.46■□□□□ 0.39
TMEM55A-203ENST00000518869 COL15A1P39059 1388 aa17.45■□□□□ 0.38
TMEM55A-203ENST00000518869 FKBP8Q14318 412 aa17.45■□□□□ 0.38
TMEM55A-203ENST00000518869 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
TMEM55A-203ENST00000518869 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
TMEM55A-203ENST00000518869 TM4SF1P30408 202 aa17.43■□□□□ 0.38
TMEM55A-203ENST00000518869 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
TMEM55A-203ENST00000518869 TJP1Q07157 1748 aa17.43■□□□□ 0.38
TMEM55A-203ENST00000518869 YBX3P16989 372 aaKnown RBP eCLIP17.42■□□□□ 0.38
TMEM55A-203ENST00000518869 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
TMEM55A-203ENST00000518869 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
TMEM55A-203ENST00000518869 RIPK4P57078 832 aa17.41■□□□□ 0.38
TMEM55A-203ENST00000518869 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
TMEM55A-203ENST00000518869 VIRMAQ69YN4 1812 aaKnown RBP17.41■□□□□ 0.38
TMEM55A-203ENST00000518869 KCNQ3O43525 872 aa17.4■□□□□ 0.38
TMEM55A-203ENST00000518869 A1BGP04217 495 aa17.4■□□□□ 0.38
TMEM55A-203ENST00000518869 BABAM1Q9NWV8 329 aa17.4■□□□□ 0.38
TMEM55A-203ENST00000518869 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
TMEM55A-203ENST00000518869 ZNF652Q9Y2D9 606 aa17.4■□□□□ 0.38
TMEM55A-203ENST00000518869 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
TMEM55A-203ENST00000518869 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
TMEM55A-203ENST00000518869 NFIXQ14938 502 aa17.39■□□□□ 0.37
TMEM55A-203ENST00000518869 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
TMEM55A-203ENST00000518869 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
TMEM55A-203ENST00000518869 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
TMEM55A-203ENST00000518869 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 RGL2O15211 777 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 NPHP1O15259 732 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 BCS1LQ9Y276 419 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
TMEM55A-203ENST00000518869 SERPINB2P05120 415 aa17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 DPEP1P16444 411 aa17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 DDR1Q08345 913 aa17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 TBC1D2BQ9UPU7 963 aa17.37■□□□□ 0.37
TMEM55A-203ENST00000518869 SIPA1L3O60292 1781 aaPredicted RBP17.36■□□□□ 0.37
TMEM55A-203ENST00000518869 DALRD3Q5D0E6 543 aaKnown RBP17.36■□□□□ 0.37
TMEM55A-203ENST00000518869 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
TMEM55A-203ENST00000518869 CHD4Q14839 1912 aa17.36■□□□□ 0.37
TMEM55A-203ENST00000518869 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
TMEM55A-203ENST00000518869 TSPYL4Q9UJ04 414 aa17.35■□□□□ 0.37
TMEM55A-203ENST00000518869 PXDNLA1KZ92 1463 aa17.34■□□□□ 0.37
TMEM55A-203ENST00000518869 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
TMEM55A-203ENST00000518869 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
TMEM55A-203ENST00000518869 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
TMEM55A-203ENST00000518869 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
TMEM55A-203ENST00000518869 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.36
TMEM55A-203ENST00000518869 H0YIN7 160 aa17.33■□□□□ 0.36
TMEM55A-203ENST00000518869 PDE6BP35913 854 aa17.33■□□□□ 0.36
TMEM55A-203ENST00000518869 ARHGAP27Q6ZUM4 889 aa17.33■□□□□ 0.36
TMEM55A-203ENST00000518869 WWC3Q9ULE0 1092 aa17.33■□□□□ 0.36
TMEM55A-203ENST00000518869 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
TMEM55A-203ENST00000518869 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 ST5P78524 1137 aa17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 CCDC146Q8IYE0 955 aa17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
TMEM55A-203ENST00000518869 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
TMEM55A-203ENST00000518869 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
TMEM55A-203ENST00000518869 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
TMEM55A-203ENST00000518869 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
TMEM55A-203ENST00000518869 ANP32CO43423 234 aa17.3■□□□□ 0.36
TMEM55A-203ENST00000518869 KCNA3P22001 575 aa17.3■□□□□ 0.36
TMEM55A-203ENST00000518869 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
TMEM55A-203ENST00000518869 KIF6Q6ZMV9 814 aa17.3■□□□□ 0.36
TMEM55A-203ENST00000518869 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
TMEM55A-203ENST00000518869 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
TMEM55A-203ENST00000518869 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
TMEM55A-203ENST00000518869 TTLL6Q8N841 843 aa17.29■□□□□ 0.36
TMEM55A-203ENST00000518869 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 CHRNA5P30532 468 aa17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
TMEM55A-203ENST00000518869 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
TMEM55A-203ENST00000518869 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
TMEM55A-203ENST00000518869 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.36
TMEM55A-203ENST00000518869 LAS1LQ9Y4W2 734 aaKnown RBP17.27■□□□□ 0.36
TMEM55A-203ENST00000518869 PRR5LQ6MZQ0 368 aa17.26■□□□□ 0.35
TMEM55A-203ENST00000518869 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
TMEM55A-203ENST00000518869 CHL1O00533 1208 aa17.25■□□□□ 0.35
TMEM55A-203ENST00000518869 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
TMEM55A-203ENST00000518869 CNKSR1Q969H4 720 aa17.25■□□□□ 0.35
TMEM55A-203ENST00000518869 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms