RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 GNASQ5JWF2 1037 aa6.92□□□□□ -1.3
VPS13B-207ENST00000518569 TMEM214Q6NUQ4 689 aaKnown RBP6.92□□□□□ -1.3
VPS13B-207ENST00000518569 POTEAQ6S8J7 498 aa6.92□□□□□ -1.3
VPS13B-207ENST00000518569 SLC9A9Q8IVB4 645 aa6.92□□□□□ -1.3
VPS13B-207ENST00000518569 ZNF295-AS1Q8N0V1 137 aa6.92□□□□□ -1.3
VPS13B-207ENST00000518569 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
VPS13B-207ENST00000518569 NIFKQ9BYG3 293 aaKnown RBP6.92□□□□□ -1.3
VPS13B-207ENST00000518569 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-207ENST00000518569 C21orf2O43822 256 aa6.91□□□□□ -1.3
VPS13B-207ENST00000518569 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
VPS13B-207ENST00000518569 SSFA2P28290 1259 aa6.91□□□□□ -1.3
VPS13B-207ENST00000518569 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.91□□□□□ -1.3
VPS13B-207ENST00000518569 SCG3Q8WXD2 468 aaKnown RBP6.91□□□□□ -1.3
VPS13B-207ENST00000518569 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-207ENST00000518569 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
VPS13B-207ENST00000518569 CARNS1A5YM72 827 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 PRMT3O60678 531 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 BRD1O95696 1058 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 HIRAP54198 1017 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-207ENST00000518569 NBPF10Q6P3W6 841 aaKnown RBP6.9□□□□□ -1.3
VPS13B-207ENST00000518569 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 DNMT3LQ9UJW3 386 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 CHMP3Q9Y3E7 222 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 USP3Q9Y6I4 520 aa6.9□□□□□ -1.3
VPS13B-207ENST00000518569 PPP1R12BO60237 982 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-207ENST00000518569 NOS2P35228 1153 aa6.89□□□□□ -1.31
VPS13B-207ENST00000518569 C4orf17Q53FE4 359 aa6.89□□□□□ -1.31
VPS13B-207ENST00000518569 PRICKLE2Q7Z3G6 844 aa6.89□□□□□ -1.31
VPS13B-207ENST00000518569 PRIMPOLQ96LW4 560 aa6.89□□□□□ -1.31
VPS13B-207ENST00000518569 C2orf49Q9BVC5 232 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-207ENST00000518569 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
VPS13B-207ENST00000518569 SERTM1A2A2V5 107 aa6.88□□□□□ -1.31
VPS13B-207ENST00000518569 FIGNL2A6NMB9 653 aa6.88□□□□□ -1.31
VPS13B-207ENST00000518569 PTCD1O75127 700 aaKnown RBP6.88□□□□□ -1.31
VPS13B-207ENST00000518569 POU4F2Q12837 409 aa6.88□□□□□ -1.31
VPS13B-207ENST00000518569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS13B-207ENST00000518569 PATL2C9JE40 543 aaKnown RBP6.87□□□□□ -1.31
VPS13B-207ENST00000518569 EML1O00423 815 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 LGR5O75473 907 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 TBCELQ5QJ74 424 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 KCTD17Q8N5Z5 321 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 ZDHHC1Q8WTX9 485 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 L3MBTL2Q969R5 705 aa6.87□□□□□ -1.31
VPS13B-207ENST00000518569 A0A1B0GTH6 734 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 PPFIA3O75145 1194 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 FKBP5Q13451 457 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-207ENST00000518569 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 CHMP7Q8WUX9 453 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-207ENST00000518569 VTI1AQ96AJ9 217 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 DYRK1BQ9Y463 629 aa6.86□□□□□ -1.31
VPS13B-207ENST00000518569 VSIG8P0DPA2 414 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 RHOQP17081 205 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 ARID4AP29374 1257 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-207ENST00000518569 PLA2G4AP47712 749 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 KCNA1Q09470 495 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 NBPF1Q3BBV0 1214 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 TIMMDC1Q9NPL8 285 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 ZNF232Q9UNY5 417 aa6.85□□□□□ -1.31
VPS13B-207ENST00000518569 GPC6Q9Y625 555 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-207ENST00000518569 SLC35F4A4IF30 521 aa6.84□□□□□ -1.31
VPS13B-207ENST00000518569 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-207ENST00000518569 PHKA2P46019 1235 aa6.84□□□□□ -1.31
VPS13B-207ENST00000518569 PTSQ03393 145 aa6.83□□□□□ -1.32
VPS13B-207ENST00000518569 TXNDC2Q86VQ3 553 aa6.83□□□□□ -1.32
VPS13B-207ENST00000518569 MYO19Q96H55 970 aa6.83□□□□□ -1.32
VPS13B-207ENST00000518569 GNEQ9Y223 722 aaKnown RBP6.83□□□□□ -1.32
VPS13B-207ENST00000518569 PARP3Q9Y6F1 533 aa6.83□□□□□ -1.32
VPS13B-207ENST00000518569 SENP3-EIF4A1A0A087X0R7 540 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 F11P03951 625 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 TATP17735 454 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-207ENST00000518569 MSX1P28360 303 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 TXLNAP40222 546 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 RTN1Q16799 776 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 SH3PXD2AQ5TCZ1 1133 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 ALDH16A1Q8IZ83 802 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 CCER1Q8TC90 406 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-207ENST00000518569 AIDAQ96BJ3 306 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 HCN4Q9Y3Q4 1203 aa6.82□□□□□ -1.32
VPS13B-207ENST00000518569 LBRQ14739 615 aaKnown RBP6.81□□□□□ -1.32
VPS13B-207ENST00000518569 HIF1AQ16665 826 aa6.81□□□□□ -1.32
VPS13B-207ENST00000518569 C7orf43Q8WVR3 580 aa6.81□□□□□ -1.32
VPS13B-207ENST00000518569 GMCL1Q96IK5 515 aa6.81□□□□□ -1.32
VPS13B-207ENST00000518569 CRISPLD1Q9H336 500 aa6.81□□□□□ -1.32
VPS13B-207ENST00000518569 QTRT2Q9H974 415 aaKnown RBP6.81□□□□□ -1.32
VPS13B-207ENST00000518569 ATP4AP20648 1035 aa6.8□□□□□ -1.32
VPS13B-207ENST00000518569 C16orf46Q6P387 395 aa6.8□□□□□ -1.32
VPS13B-207ENST00000518569 CCDC155Q8N6L0 562 aa6.8□□□□□ -1.32
VPS13B-207ENST00000518569 MKNK1Q9BUB5 465 aa6.8□□□□□ -1.32
VPS13B-207ENST00000518569 EGFL7Q9UHF1 273 aa6.8□□□□□ -1.32
VPS13B-207ENST00000518569 CDC14CA4D256 554 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 H7C1W4 665 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 CAPN12Q6ZSI9 719 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 AEBP1Q8IUX7 1158 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 CNTNAP3BQ96NU0 1288 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 ZIC5Q96T25 663 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms