RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
TTC1-202ENST00000518560 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
TTC1-202ENST00000518560 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
TTC1-202ENST00000518560 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
TTC1-202ENST00000518560 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
TTC1-202ENST00000518560 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 RGS20O76081 388 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 HSP90AB2PQ58FF8 381 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 VPS9D1Q9Y2B5 631 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 LY75O60449 1722 aa13.39□□□□□ -0.27
TTC1-202ENST00000518560 DSG2Q14126 1118 aa13.38□□□□□ -0.27
TTC1-202ENST00000518560 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
TTC1-202ENST00000518560 FLT4P35916 1363 aa13.37□□□□□ -0.27
TTC1-202ENST00000518560 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
TTC1-202ENST00000518560 ITGB4P16144 1822 aa13.36□□□□□ -0.27
TTC1-202ENST00000518560 INSRP06213 1382 aa13.36□□□□□ -0.27
TTC1-202ENST00000518560 NSD2O96028 1365 aa13.35□□□□□ -0.27
TTC1-202ENST00000518560 GOLGA8CPA6NN73 597 aa13.35□□□□□ -0.27
TTC1-202ENST00000518560 KCNQ4P56696 695 aa13.35□□□□□ -0.27
TTC1-202ENST00000518560 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.27
TTC1-202ENST00000518560 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
TTC1-202ENST00000518560 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
TTC1-202ENST00000518560 ZBTB7AO95365 584 aa13.34□□□□□ -0.27
TTC1-202ENST00000518560 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
TTC1-202ENST00000518560 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
TTC1-202ENST00000518560 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
TTC1-202ENST00000518560 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
TTC1-202ENST00000518560 LRRC4BQ9NT99 713 aa13.34□□□□□ -0.27
TTC1-202ENST00000518560 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
TTC1-202ENST00000518560 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
TTC1-202ENST00000518560 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
TTC1-202ENST00000518560 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
TTC1-202ENST00000518560 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
TTC1-202ENST00000518560 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.28
TTC1-202ENST00000518560 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
TTC1-202ENST00000518560 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
TTC1-202ENST00000518560 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
TTC1-202ENST00000518560 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
TTC1-202ENST00000518560 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
TTC1-202ENST00000518560 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
TTC1-202ENST00000518560 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
TTC1-202ENST00000518560 C5P01031 1676 aa13.31□□□□□ -0.28
TTC1-202ENST00000518560 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
TTC1-202ENST00000518560 SLC4A5Q9BY07 1137 aa13.31□□□□□ -0.28
TTC1-202ENST00000518560 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
TTC1-202ENST00000518560 PANK3Q9H999 370 aa13.29□□□□□ -0.28
TTC1-202ENST00000518560 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
TTC1-202ENST00000518560 CYP27B1O15528 508 aa13.28□□□□□ -0.28
TTC1-202ENST00000518560 THSD4Q6ZMP0 1018 aa13.28□□□□□ -0.28
TTC1-202ENST00000518560 EYA1Q99502 592 aa13.28□□□□□ -0.28
TTC1-202ENST00000518560 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
TTC1-202ENST00000518560 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
TTC1-202ENST00000518560 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.28
TTC1-202ENST00000518560 PTPREP23469 700 aa13.27□□□□□ -0.29
TTC1-202ENST00000518560 WNT2BQ93097 391 aa13.27□□□□□ -0.29
TTC1-202ENST00000518560 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
TTC1-202ENST00000518560 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
TTC1-202ENST00000518560 MRPL50Q8N5N7 158 aaKnown RBP13.26□□□□□ -0.29
TTC1-202ENST00000518560 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
TTC1-202ENST00000518560 PNPLA7Q6ZV29 1317 aa13.25□□□□□ -0.29
TTC1-202ENST00000518560 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
TTC1-202ENST00000518560 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
TTC1-202ENST00000518560 MTFR1LQ9H019 292 aa13.24□□□□□ -0.29
TTC1-202ENST00000518560 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
TTC1-202ENST00000518560 PALLDQ8WX93 1383 aa13.23□□□□□ -0.29
TTC1-202ENST00000518560 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
TTC1-202ENST00000518560 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
TTC1-202ENST00000518560 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
TTC1-202ENST00000518560 UBR3Q6ZT12 1888 aa13.23□□□□□ -0.29
TTC1-202ENST00000518560 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
TTC1-202ENST00000518560 BHMG1C9JSJ3 638 aaPredicted RBP13.22□□□□□ -0.29
TTC1-202ENST00000518560 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
TTC1-202ENST00000518560 MORC1Q86VD1 984 aa13.21□□□□□ -0.29
TTC1-202ENST00000518560 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.29
TTC1-202ENST00000518560 FOSBP53539 338 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 HS6ST3Q8IZP7 471 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 PIGBQ92521 554 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
TTC1-202ENST00000518560 PHKG2P15735 406 aa13.19□□□□□ -0.3
TTC1-202ENST00000518560 ARXQ96QS3 562 aa13.19□□□□□ -0.3
TTC1-202ENST00000518560 ZBED2Q9BTP6 218 aa13.19□□□□□ -0.3
TTC1-202ENST00000518560 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
TTC1-202ENST00000518560 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
TTC1-202ENST00000518560 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
TTC1-202ENST00000518560 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
TTC1-202ENST00000518560 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
TTC1-202ENST00000518560 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
TTC1-202ENST00000518560 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
TTC1-202ENST00000518560 SYT17Q9BSW7 474 aa13.18□□□□□ -0.3
TTC1-202ENST00000518560 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
TTC1-202ENST00000518560 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
TTC1-202ENST00000518560 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
TTC1-202ENST00000518560 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
TTC1-202ENST00000518560 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms