RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 FIGNL1Q6PIW4 674 aa8.69□□□□□ -1.02
SMN1-210ENST00000518504 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
SMN1-210ENST00000518504 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
SMN1-210ENST00000518504 KHNYNO15037 678 aaKnown RBP8.68□□□□□ -1.02
SMN1-210ENST00000518504 SCNN1DP51172 638 aa8.68□□□□□ -1.02
SMN1-210ENST00000518504 PCBP4P57723 403 aaKnown RBP8.68□□□□□ -1.02
SMN1-210ENST00000518504 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
SMN1-210ENST00000518504 ARSJQ5FYB0 599 aaPredicted RBP8.68□□□□□ -1.02
SMN1-210ENST00000518504 TBC1D2BQ9UPU7 963 aa8.68□□□□□ -1.02
SMN1-210ENST00000518504 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
SMN1-210ENST00000518504 GDF10P55107 478 aa8.67□□□□□ -1.02
SMN1-210ENST00000518504 TNP2Q05952 138 aa8.67□□□□□ -1.02
SMN1-210ENST00000518504 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
SMN1-210ENST00000518504 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
SMN1-210ENST00000518504 ADH6P28332 368 aa8.66□□□□□ -1.02
SMN1-210ENST00000518504 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
SMN1-210ENST00000518504 PLVAPQ9BX97 442 aa8.66□□□□□ -1.02
SMN1-210ENST00000518504 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
SMN1-210ENST00000518504 INHAP05111 366 aa8.65□□□□□ -1.02
SMN1-210ENST00000518504 ZMYM1Q5SVZ6 1142 aa8.65□□□□□ -1.02
SMN1-210ENST00000518504 APBB1O00213 710 aa8.64□□□□□ -1.03
SMN1-210ENST00000518504 GATA4P43694 442 aa8.64□□□□□ -1.03
SMN1-210ENST00000518504 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMN1-210ENST00000518504 PRR12Q9ULL5 1215 aa8.64□□□□□ -1.03
SMN1-210ENST00000518504 USP3Q9Y6I4 520 aa8.64□□□□□ -1.03
SMN1-210ENST00000518504 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
SMN1-210ENST00000518504 SMTNP53814 917 aa8.63□□□□□ -1.03
SMN1-210ENST00000518504 STRN4Q9NRL3 753 aa8.63□□□□□ -1.03
SMN1-210ENST00000518504 SOCS7O14512 581 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 VAC14Q08AM6 782 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 C1orf216Q8TAB5 229 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 GJA3Q9Y6H8 435 aa8.62□□□□□ -1.03
SMN1-210ENST00000518504 IRF5Q13568 498 aa8.61□□□□□ -1.03
SMN1-210ENST00000518504 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
SMN1-210ENST00000518504 FAM182BQ5T319 152 aa8.61□□□□□ -1.03
SMN1-210ENST00000518504 SIRT1Q96EB6 747 aa8.61□□□□□ -1.03
SMN1-210ENST00000518504 CABP1Q9NZU7 370 aa8.61□□□□□ -1.03
SMN1-210ENST00000518504 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
SMN1-210ENST00000518504 ZNF468Q5VIY5 522 aaPredicted RBP8.6□□□□□ -1.03
SMN1-210ENST00000518504 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
SMN1-210ENST00000518504 SPATA31C1P0DKV0 1188 aa8.59□□□□□ -1.03
SMN1-210ENST00000518504 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
SMN1-210ENST00000518504 BICDL1Q6ZP65 573 aa8.59□□□□□ -1.03
SMN1-210ENST00000518504 ZNF295-AS1Q8N0V1 137 aa8.59□□□□□ -1.03
SMN1-210ENST00000518504 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
SMN1-210ENST00000518504 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
SMN1-210ENST00000518504 TMEM229AB2RXF0 380 aa8.58□□□□□ -1.04
SMN1-210ENST00000518504 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
SMN1-210ENST00000518504 FAM157BP0CG42 384 aa8.58□□□□□ -1.04
SMN1-210ENST00000518504 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
SMN1-210ENST00000518504 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
SMN1-210ENST00000518504 AVENQ9NQS1 362 aaPredicted RBP8.58□□□□□ -1.04
SMN1-210ENST00000518504 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
SMN1-210ENST00000518504 IQSEC3Q9UPP2 1182 aaPredicted RBP8.58□□□□□ -1.04
SMN1-210ENST00000518504 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
SMN1-210ENST00000518504 SYT9Q86SS6 491 aa8.57□□□□□ -1.04
SMN1-210ENST00000518504 PLPP7Q8NBV4 271 aa8.57□□□□□ -1.04
SMN1-210ENST00000518504 BCANQ96GW7 911 aa8.57□□□□□ -1.04
SMN1-210ENST00000518504 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
SMN1-210ENST00000518504 ELOA3CA0A087WX78 387 aaPredicted RBP8.56□□□□□ -1.04
SMN1-210ENST00000518504 A6NJY4 79 aa8.56□□□□□ -1.04
SMN1-210ENST00000518504 ELOA3DA6NLF2 546 aaPredicted RBP8.56□□□□□ -1.04
SMN1-210ENST00000518504 TXLNAP40222 546 aa8.56□□□□□ -1.04
SMN1-210ENST00000518504 ELOA3BQ3SY89 546 aa8.56□□□□□ -1.04
SMN1-210ENST00000518504 ELOA3Q8NG57 546 aa8.56□□□□□ -1.04
SMN1-210ENST00000518504 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
SMN1-210ENST00000518504 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
SMN1-210ENST00000518504 EFSO43281 561 aa8.54□□□□□ -1.04
SMN1-210ENST00000518504 ALAS2P22557 587 aa8.54□□□□□ -1.04
SMN1-210ENST00000518504 MTFR1Q15390 333 aa8.54□□□□□ -1.04
SMN1-210ENST00000518504 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
SMN1-210ENST00000518504 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
SMN1-210ENST00000518504 SLC4A9Q96Q91 983 aa8.54□□□□□ -1.04
SMN1-210ENST00000518504 M0R082 166 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 APBA3O96018 575 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 ABL2P42684 1182 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 PRRT3Q5FWE3 981 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 LRRC69Q6ZNQ3 347 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
SMN1-210ENST00000518504 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 PRM3Q9NNZ6 103 aa8.53□□□□□ -1.04
SMN1-210ENST00000518504 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
SMN1-210ENST00000518504 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
SMN1-210ENST00000518504 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
SMN1-210ENST00000518504 DYRK3O43781 588 aa8.51□□□□□ -1.05
SMN1-210ENST00000518504 GRIK4Q16099 956 aa8.51□□□□□ -1.05
SMN1-210ENST00000518504 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
SMN1-210ENST00000518504 SLC30A3Q99726 388 aa8.51□□□□□ -1.05
SMN1-210ENST00000518504 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
SMN1-210ENST00000518504 SFSWAPQ12872 951 aaKnown RBP8.5□□□□□ -1.05
SMN1-210ENST00000518504 LAMC2Q13753 1193 aa8.5□□□□□ -1.05
SMN1-210ENST00000518504 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
SMN1-210ENST00000518504 RAB44Q7Z6P3 723 aaPredicted RBP8.5□□□□□ -1.05
SMN1-210ENST00000518504 MDFIQ99750 246 aa8.5□□□□□ -1.05
SMN1-210ENST00000518504 PCDHGA11Q9Y5H2 935 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms