RNA–Protein interactions for RNA: ENST00000518149.5

NKX2-1-203, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-203ENST00000518149 VAMP4O75379 141 aa22.92■■□□□ 1.26
NKX2-1-203ENST00000518149 NUTM2AQ8IVF1 878 aaPredicted RBP22.92■■□□□ 1.26
NKX2-1-203ENST00000518149 NSFL1CQ9UNZ2 370 aaKnown RBP22.92■■□□□ 1.26
NKX2-1-203ENST00000518149 MBD3O95983 291 aa22.91■■□□□ 1.26
NKX2-1-203ENST00000518149 RNF214Q8ND24 703 aa22.91■■□□□ 1.26
NKX2-1-203ENST00000518149 CCDC94Q9BW85 323 aaPredicted RBP22.91■■□□□ 1.26
NKX2-1-203ENST00000518149 RTL1A6NKG5 1358 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 PTMAP06454 111 aaKnown RBP22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 HSPA1LP34931 641 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 KIAA2012Q0VF49 1180 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 ELL2O00472 640 aaPredicted RBP22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 ADAMTS2O95450 1211 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 IFT57Q9NWB7 429 aa22.9■■□□□ 1.26
NKX2-1-203ENST00000518149 CHAMP1Q96JM3 812 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 KIF24Q5T7B8 1368 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 FAM83GA6ND36 823 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 NBPF4Q96M43 638 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 PRDM10Q9NQV6 1147 aa22.89■■□□□ 1.25
NKX2-1-203ENST00000518149 CASC1Q6TDU7 716 aa22.87■■□□□ 1.25
NKX2-1-203ENST00000518149 MYRIPQ8NFW9 859 aa22.87■■□□□ 1.25
NKX2-1-203ENST00000518149 DCTPP1Q9H773 170 aa22.87■■□□□ 1.25
NKX2-1-203ENST00000518149 TSPYL6Q8N831 410 aa22.87■■□□□ 1.25
NKX2-1-203ENST00000518149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.87■■□□□ 1.25
NKX2-1-203ENST00000518149 TSPY26PQ9H489 355 aa22.86■■□□□ 1.25
NKX2-1-203ENST00000518149 CPDO75976 1380 aa22.86■■□□□ 1.25
NKX2-1-203ENST00000518149 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
NKX2-1-203ENST00000518149 MBIPQ9NS73 344 aa22.86■■□□□ 1.25
NKX2-1-203ENST00000518149 RGPD2P0DJD1 1756 aa22.86■■□□□ 1.25
NKX2-1-203ENST00000518149 ERBB3P21860 1342 aa22.85■■□□□ 1.25
NKX2-1-203ENST00000518149 DNTTIP2Q5QJE6 756 aaKnown RBP22.85■■□□□ 1.25
NKX2-1-203ENST00000518149 FOXD4L5Q5VV16 416 aaPredicted RBP22.85■■□□□ 1.25
NKX2-1-203ENST00000518149 FOXD4L4Q8WXT5 416 aaPredicted RBP22.85■■□□□ 1.25
NKX2-1-203ENST00000518149 TWISTNBQ3B726 338 aaPredicted RBP22.84■■□□□ 1.25
NKX2-1-203ENST00000518149 COL18A1P39060 1754 aa22.84■■□□□ 1.25
NKX2-1-203ENST00000518149 IGSF1Q8N6C5 1336 aa22.84■■□□□ 1.25
NKX2-1-203ENST00000518149 UTP14CQ5TAP6 766 aaKnown RBP22.84■■□□□ 1.25
NKX2-1-203ENST00000518149 API5Q9BZZ5 524 aaKnown RBP22.84■■□□□ 1.25
NKX2-1-203ENST00000518149 CSB-PGBD3P0DP91 1061 aa22.83■■□□□ 1.25
NKX2-1-203ENST00000518149 SDSP20132 328 aa22.83■■□□□ 1.25
NKX2-1-203ENST00000518149 DMTNQ08495 405 aa22.83■■□□□ 1.25
NKX2-1-203ENST00000518149 STRN4Q9NRL3 753 aa22.83■■□□□ 1.24
NKX2-1-203ENST00000518149 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.24
NKX2-1-203ENST00000518149 REC8O95072 547 aa22.82■■□□□ 1.24
NKX2-1-203ENST00000518149 CAMTA1Q9Y6Y1 1673 aa22.82■■□□□ 1.24
NKX2-1-203ENST00000518149 NLRP2Q9NX02 1062 aa22.82■■□□□ 1.24
NKX2-1-203ENST00000518149 ZHX1Q9UKY1 873 aaPredicted RBP22.82■■□□□ 1.24
NKX2-1-203ENST00000518149 COL22A1Q8NFW1 1626 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-203ENST00000518149 PRIMPOLQ96LW4 560 aa22.81■■□□□ 1.24
NKX2-1-203ENST00000518149 ZNF853P0CG23 659 aa22.81■■□□□ 1.24
NKX2-1-203ENST00000518149 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-203ENST00000518149 SYAP1Q96A49 352 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-203ENST00000518149 BTG4Q9NY30 223 aa22.8■■□□□ 1.24
NKX2-1-203ENST00000518149 HMGN5P82970 282 aaKnown RBP22.79■■□□□ 1.24
NKX2-1-203ENST00000518149 JCADQ9P266 1359 aa22.78■■□□□ 1.24
NKX2-1-203ENST00000518149 BRD1O95696 1058 aa22.78■■□□□ 1.24
NKX2-1-203ENST00000518149 C8orf58Q8NAV2 365 aa22.78■■□□□ 1.24
NKX2-1-203ENST00000518149 ZSCAN20P17040 1043 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-203ENST00000518149 PIBF1Q8WXW3 757 aa22.78■■□□□ 1.24
NKX2-1-203ENST00000518149 ERC2O15083 957 aa22.77■■□□□ 1.24
NKX2-1-203ENST00000518149 TMX3Q96JJ7 454 aa22.77■■□□□ 1.24
NKX2-1-203ENST00000518149 ZNF710Q8N1W2 664 aa22.77■■□□□ 1.24
NKX2-1-203ENST00000518149 ANKRD44Q8N8A2 993 aa22.77■■□□□ 1.24
NKX2-1-203ENST00000518149 JARID2Q92833 1246 aaPredicted RBP22.77■■□□□ 1.24
NKX2-1-203ENST00000518149 KDRP35968 1356 aa22.76■■□□□ 1.23
NKX2-1-203ENST00000518149 DCTN1Q14203 1278 aa22.76■■□□□ 1.23
NKX2-1-203ENST00000518149 LARP1Q6PKG0 1096 aaKnown RBP22.76■■□□□ 1.23
NKX2-1-203ENST00000518149 PHF14O94880 888 aa22.76■■□□□ 1.23
NKX2-1-203ENST00000518149 GTF2F1P35269 517 aaKnown RBP eCLIP22.76■■□□□ 1.23
NKX2-1-203ENST00000518149 EVA1CP58658 441 aa22.76■■□□□ 1.23
NKX2-1-203ENST00000518149 LMO7Q8WWI1 1683 aa22.75■■□□□ 1.23
NKX2-1-203ENST00000518149 COL5A2P05997 1499 aaPredicted RBP22.75■■□□□ 1.23
NKX2-1-203ENST00000518149 NEK4P51957 841 aa22.75■■□□□ 1.23
NKX2-1-203ENST00000518149 NOLC1Q14978 699 aaKnown RBP eCLIP22.75■■□□□ 1.23
NKX2-1-203ENST00000518149 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
NKX2-1-203ENST00000518149 TSC1Q92574 1164 aa22.75■■□□□ 1.23
NKX2-1-203ENST00000518149 SMARCA5O60264 1052 aaPredicted RBP22.74■■□□□ 1.23
NKX2-1-203ENST00000518149 UVSSAQ2YD98 709 aa22.74■■□□□ 1.23
NKX2-1-203ENST00000518149 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
NKX2-1-203ENST00000518149 MCM2P49736 904 aa22.73■■□□□ 1.23
NKX2-1-203ENST00000518149 MTHFSDQ2M296 383 aaKnown RBP22.73■■□□□ 1.23
NKX2-1-203ENST00000518149 FAM184AQ8NB25 1140 aa22.73■■□□□ 1.23
NKX2-1-203ENST00000518149 ZNF830Q96NB3 372 aaPredicted RBP22.73■■□□□ 1.23
NKX2-1-203ENST00000518149 C8orf37Q96NL8 207 aa22.73■■□□□ 1.23
NKX2-1-203ENST00000518149 APBB1O00213 710 aa22.72■■□□□ 1.23
NKX2-1-203ENST00000518149 RPAP2Q8IXW5 612 aaPredicted RBP22.72■■□□□ 1.23
NKX2-1-203ENST00000518149 MPNDQ8N594 471 aa22.72■■□□□ 1.23
NKX2-1-203ENST00000518149 WDR17Q8IZU2 1322 aa22.72■■□□□ 1.23
NKX2-1-203ENST00000518149 CUL4AQ13619 759 aa22.71■■□□□ 1.23
NKX2-1-203ENST00000518149 CEP85Q6P2H3 762 aa22.71■■□□□ 1.23
NKX2-1-203ENST00000518149 CBX1P83916 185 aa22.7■■□□□ 1.22
NKX2-1-203ENST00000518149 USP25Q9UHP3 1055 aa22.7■■□□□ 1.22
NKX2-1-203ENST00000518149 KIF3AQ9Y496 699 aa22.7■■□□□ 1.22
NKX2-1-203ENST00000518149 LRP6O75581 1613 aa22.7■■□□□ 1.22
NKX2-1-203ENST00000518149 GTPBP4Q9BZE4 634 aaKnown RBP22.69■■□□□ 1.22
NKX2-1-203ENST00000518149 GADD45BO75293 160 aaPredicted RBP22.68■■□□□ 1.22
NKX2-1-203ENST00000518149 PPP4R3BQ5MIZ7 849 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms