RNA–Protein interactions for RNA: ENST00000517979.1

CCDC25-202, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-202ENST00000517979 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
CCDC25-202ENST00000517979 CD2APQ9Y5K6 639 aa18.27■□□□□ 0.52
CCDC25-202ENST00000517979 MMP10P09238 476 aa18.26■□□□□ 0.51
CCDC25-202ENST00000517979 CCDC87Q9NVE4 849 aa18.26■□□□□ 0.51
CCDC25-202ENST00000517979 UBR2Q8IWV8 1755 aa18.26■□□□□ 0.51
CCDC25-202ENST00000517979 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
CCDC25-202ENST00000517979 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
CCDC25-202ENST00000517979 INTS5Q6P9B9 1019 aaKnown RBP18.25■□□□□ 0.51
CCDC25-202ENST00000517979 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
CCDC25-202ENST00000517979 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
CCDC25-202ENST00000517979 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
CCDC25-202ENST00000517979 NEFMP07197 916 aa18.24■□□□□ 0.51
CCDC25-202ENST00000517979 CYP19A1P11511 503 aaPredicted RBP18.24■□□□□ 0.51
CCDC25-202ENST00000517979 GYS1P13807 737 aa18.24■□□□□ 0.51
CCDC25-202ENST00000517979 RALBP1Q15311 655 aa18.24■□□□□ 0.51
CCDC25-202ENST00000517979 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
CCDC25-202ENST00000517979 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
CCDC25-202ENST00000517979 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
CCDC25-202ENST00000517979 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
CCDC25-202ENST00000517979 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
CCDC25-202ENST00000517979 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
CCDC25-202ENST00000517979 MCM10Q7L590 875 aa18.21■□□□□ 0.51
CCDC25-202ENST00000517979 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
CCDC25-202ENST00000517979 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
CCDC25-202ENST00000517979 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
CCDC25-202ENST00000517979 STARD3NLO95772 234 aa18.2■□□□□ 0.5
CCDC25-202ENST00000517979 YBX3P16989 372 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC25-202ENST00000517979 FMNL2Q96PY5 1086 aa18.2■□□□□ 0.5
CCDC25-202ENST00000517979 CHD4Q14839 1912 aa18.19■□□□□ 0.5
CCDC25-202ENST00000517979 COL15A1P39059 1388 aa18.19■□□□□ 0.5
CCDC25-202ENST00000517979 ZPR1O75312 459 aa18.19■□□□□ 0.5
CCDC25-202ENST00000517979 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
CCDC25-202ENST00000517979 PARP3Q9Y6F1 533 aa18.19■□□□□ 0.5
CCDC25-202ENST00000517979 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
CCDC25-202ENST00000517979 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
CCDC25-202ENST00000517979 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
CCDC25-202ENST00000517979 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
CCDC25-202ENST00000517979 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
CCDC25-202ENST00000517979 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
CCDC25-202ENST00000517979 KCNQ3O43525 872 aa18.17■□□□□ 0.5
CCDC25-202ENST00000517979 TEX13AQ9BXU3 409 aaPredicted RBP18.17■□□□□ 0.5
CCDC25-202ENST00000517979 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
CCDC25-202ENST00000517979 WWC3Q9ULE0 1092 aa18.17■□□□□ 0.5
CCDC25-202ENST00000517979 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
CCDC25-202ENST00000517979 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
CCDC25-202ENST00000517979 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
CCDC25-202ENST00000517979 KIF13BQ9NQT8 1826 aa18.15■□□□□ 0.5
CCDC25-202ENST00000517979 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
CCDC25-202ENST00000517979 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.5
CCDC25-202ENST00000517979 DLG5Q8TDM6 1919 aa18.14■□□□□ 0.49
CCDC25-202ENST00000517979 DDR1Q08345 913 aa18.14■□□□□ 0.49
CCDC25-202ENST00000517979 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
CCDC25-202ENST00000517979 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
CCDC25-202ENST00000517979 A0A087WZG4 1122 aa18.13■□□□□ 0.49
CCDC25-202ENST00000517979 REM2Q8IYK8 340 aaPredicted RBP18.13■□□□□ 0.49
CCDC25-202ENST00000517979 EIF5P55010 431 aaKnown RBP18.12■□□□□ 0.49
CCDC25-202ENST00000517979 TGFB2P61812 414 aa18.12■□□□□ 0.49
CCDC25-202ENST00000517979 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
CCDC25-202ENST00000517979 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
CCDC25-202ENST00000517979 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
CCDC25-202ENST00000517979 A1BGP04217 495 aa18.11■□□□□ 0.49
CCDC25-202ENST00000517979 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
CCDC25-202ENST00000517979 ZNF784Q8NCA9 323 aaPredicted RBP18.11■□□□□ 0.49
CCDC25-202ENST00000517979 KIAA1551Q9HCM1 1747 aa18.11■□□□□ 0.49
CCDC25-202ENST00000517979 A0A0G2JLW4 131 aa18.1■□□□□ 0.49
CCDC25-202ENST00000517979 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
CCDC25-202ENST00000517979 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
CCDC25-202ENST00000517979 TM4SF1P30408 202 aa18.1■□□□□ 0.49
CCDC25-202ENST00000517979 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
CCDC25-202ENST00000517979 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
CCDC25-202ENST00000517979 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
CCDC25-202ENST00000517979 DPEP1P16444 411 aa18.09■□□□□ 0.49
CCDC25-202ENST00000517979 NFIXQ14938 502 aa18.09■□□□□ 0.49
CCDC25-202ENST00000517979 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC25-202ENST00000517979 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
CCDC25-202ENST00000517979 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
CCDC25-202ENST00000517979 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
CCDC25-202ENST00000517979 USP16Q9Y5T5 823 aa18.09■□□□□ 0.49
CCDC25-202ENST00000517979 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
CCDC25-202ENST00000517979 PRKRIP1Q9H875 184 aaPredicted RBP18.08■□□□□ 0.48
CCDC25-202ENST00000517979 PIP4K2AP48426 406 aaPredicted RBP18.07■□□□□ 0.48
CCDC25-202ENST00000517979 TBC1D2BQ9UPU7 963 aa18.07■□□□□ 0.48
CCDC25-202ENST00000517979 BCS1LQ9Y276 419 aa18.07■□□□□ 0.48
CCDC25-202ENST00000517979 KDM3BQ7LBC6 1761 aa18.07■□□□□ 0.48
CCDC25-202ENST00000517979 RIPK4P57078 832 aa18.06■□□□□ 0.48
CCDC25-202ENST00000517979 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
CCDC25-202ENST00000517979 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
CCDC25-202ENST00000517979 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
CCDC25-202ENST00000517979 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
CCDC25-202ENST00000517979 SERPINB2P05120 415 aa18.04■□□□□ 0.48
CCDC25-202ENST00000517979 TMPOP42166 694 aaKnown RBP18.04■□□□□ 0.48
CCDC25-202ENST00000517979 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
CCDC25-202ENST00000517979 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
CCDC25-202ENST00000517979 SPDYE1Q8NFV5 336 aaPredicted RBP18.04■□□□□ 0.48
CCDC25-202ENST00000517979 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
CCDC25-202ENST00000517979 BRCA1P38398 1863 aaKnown RBP18.03■□□□□ 0.48
CCDC25-202ENST00000517979 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
CCDC25-202ENST00000517979 CHRNA5P30532 468 aa18.03■□□□□ 0.48
CCDC25-202ENST00000517979 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
CCDC25-202ENST00000517979 PIM2Q9P1W9 311 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms