RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 KCNA3P22001 575 aa11.78□□□□□ -0.52
PABPC1-202ENST00000517403 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
PABPC1-202ENST00000517403 FLAD1Q8NFF5 587 aa11.78□□□□□ -0.52
PABPC1-202ENST00000517403 SLC52A2Q9HAB3 445 aa11.78□□□□□ -0.52
PABPC1-202ENST00000517403 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
PABPC1-202ENST00000517403 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
PABPC1-202ENST00000517403 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
PABPC1-202ENST00000517403 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
PABPC1-202ENST00000517403 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
PABPC1-202ENST00000517403 PHACTR3Q96KR7 559 aa11.77□□□□□ -0.53
PABPC1-202ENST00000517403 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
PABPC1-202ENST00000517403 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
PABPC1-202ENST00000517403 KCNQ3O43525 872 aa11.76□□□□□ -0.53
PABPC1-202ENST00000517403 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
PABPC1-202ENST00000517403 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-202ENST00000517403 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
PABPC1-202ENST00000517403 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
PABPC1-202ENST00000517403 ZBTB1Q9Y2K1 713 aa11.76□□□□□ -0.53
PABPC1-202ENST00000517403 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
PABPC1-202ENST00000517403 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
PABPC1-202ENST00000517403 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
PABPC1-202ENST00000517403 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
PABPC1-202ENST00000517403 DPEP1P16444 411 aa11.74□□□□□ -0.53
PABPC1-202ENST00000517403 C1QTNF8P60827 252 aa11.74□□□□□ -0.53
PABPC1-202ENST00000517403 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
PABPC1-202ENST00000517403 COL15A1P39059 1388 aa11.74□□□□□ -0.53
PABPC1-202ENST00000517403 SBF1O95248 1867 aa11.74□□□□□ -0.53
PABPC1-202ENST00000517403 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
PABPC1-202ENST00000517403 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
PABPC1-202ENST00000517403 PRELPP51888 382 aa11.73□□□□□ -0.53
PABPC1-202ENST00000517403 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
PABPC1-202ENST00000517403 KDM3BQ7LBC6 1761 aa11.73□□□□□ -0.53
PABPC1-202ENST00000517403 ZNF526Q8TF50 670 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-202ENST00000517403 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-202ENST00000517403 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
PABPC1-202ENST00000517403 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
PABPC1-202ENST00000517403 CHRNA5P30532 468 aa11.72□□□□□ -0.53
PABPC1-202ENST00000517403 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
PABPC1-202ENST00000517403 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
PABPC1-202ENST00000517403 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
PABPC1-202ENST00000517403 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
PABPC1-202ENST00000517403 TM4SF1P30408 202 aa11.71□□□□□ -0.53
PABPC1-202ENST00000517403 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
PABPC1-202ENST00000517403 PIP4K2AP48426 406 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-202ENST00000517403 TIAM2Q8IVF5 1701 aa11.71□□□□□ -0.54
PABPC1-202ENST00000517403 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.54
PABPC1-202ENST00000517403 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
PABPC1-202ENST00000517403 KIF3CO14782 793 aa11.7□□□□□ -0.54
PABPC1-202ENST00000517403 RFC4P35249 363 aa11.7□□□□□ -0.54
PABPC1-202ENST00000517403 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
PABPC1-202ENST00000517403 NFIXQ14938 502 aa11.7□□□□□ -0.54
PABPC1-202ENST00000517403 TPRNQ4KMQ1 711 aa11.7□□□□□ -0.54
PABPC1-202ENST00000517403 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
PABPC1-202ENST00000517403 GRIN3BO60391 1043 aa11.69□□□□□ -0.54
PABPC1-202ENST00000517403 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-202ENST00000517403 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
PABPC1-202ENST00000517403 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
PABPC1-202ENST00000517403 CCDC24Q8N4L8 307 aa11.68□□□□□ -0.54
PABPC1-202ENST00000517403 CEP350Q5VT06 3117 aa11.67□□□□□ -0.54
PABPC1-202ENST00000517403 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
PABPC1-202ENST00000517403 EIF5P55010 431 aaKnown RBP11.67□□□□□ -0.54
PABPC1-202ENST00000517403 RASSF7Q02833 373 aa11.67□□□□□ -0.54
PABPC1-202ENST00000517403 MCM10Q7L590 875 aa11.67□□□□□ -0.54
PABPC1-202ENST00000517403 SLC51AQ86UW1 340 aa11.67□□□□□ -0.54
PABPC1-202ENST00000517403 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
PABPC1-202ENST00000517403 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
PABPC1-202ENST00000517403 GNAT3A8MTJ3 354 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 A1BGP04217 495 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 TGFB2P61812 414 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
PABPC1-202ENST00000517403 SLX4Q8IY92 1834 aa11.65□□□□□ -0.54
PABPC1-202ENST00000517403 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-202ENST00000517403 THUMPD2Q9BTF0 503 aaKnown RBP11.65□□□□□ -0.54
PABPC1-202ENST00000517403 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
PABPC1-202ENST00000517403 PARP3Q9Y6F1 533 aa11.65□□□□□ -0.54
PABPC1-202ENST00000517403 FER1L6Q2WGJ9 1857 aa11.65□□□□□ -0.54
PABPC1-202ENST00000517403 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
PABPC1-202ENST00000517403 FCHSD2O94868 740 aa11.64□□□□□ -0.55
PABPC1-202ENST00000517403 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
PABPC1-202ENST00000517403 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
PABPC1-202ENST00000517403 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
PABPC1-202ENST00000517403 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-202ENST00000517403 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
PABPC1-202ENST00000517403 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
PABPC1-202ENST00000517403 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
PABPC1-202ENST00000517403 PLEKHF1Q96S99 279 aa11.63□□□□□ -0.55
PABPC1-202ENST00000517403 SERPINB2P05120 415 aa11.62□□□□□ -0.55
PABPC1-202ENST00000517403 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-202ENST00000517403 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.55
PABPC1-202ENST00000517403 C9orf131Q5VYM1 1079 aa11.62□□□□□ -0.55
PABPC1-202ENST00000517403 ARHGAP27Q6ZUM4 889 aa11.62□□□□□ -0.55
PABPC1-202ENST00000517403 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-202ENST00000517403 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
PABPC1-202ENST00000517403 WDR90Q96KV7 1748 aa11.62□□□□□ -0.55
PABPC1-202ENST00000517403 NFKBIEO00221 500 aa11.61□□□□□ -0.55
PABPC1-202ENST00000517403 TEFQ10587 303 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms