RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 CHMP3Q9Y3E7 222 aa7.75□□□□□ -1.17
LINC00534-201ENST00000517400 NACADO15069 1562 aa7.75□□□□□ -1.17
LINC00534-201ENST00000517400 SERTM1A2A2V5 107 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 GTF2E1P29083 439 aaPredicted RBP7.74□□□□□ -1.17
LINC00534-201ENST00000517400 NOS2P35228 1153 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
LINC00534-201ENST00000517400 FOXD4L5Q5VV16 416 aaPredicted RBP7.74□□□□□ -1.17
LINC00534-201ENST00000517400 TMEM214Q6NUQ4 689 aaKnown RBP7.74□□□□□ -1.17
LINC00534-201ENST00000517400 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 VTI1AQ96AJ9 217 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 MKNK1Q9BUB5 465 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 NIFKQ9BYG3 293 aaKnown RBP7.74□□□□□ -1.17
LINC00534-201ENST00000517400 POLMQ9NP87 494 aaPredicted RBP7.74□□□□□ -1.17
LINC00534-201ENST00000517400 EGFL7Q9UHF1 273 aa7.74□□□□□ -1.17
LINC00534-201ENST00000517400 SPATA31C2B4DYI2 1134 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 EML1O00423 815 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 AXIN1O15169 862 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 SERPINB4P48594 390 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 SCARF1Q14162 830 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 C6orf118Q5T5N4 469 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 ZDHHC1Q8WTX9 485 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 CABP1Q9NZU7 370 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 SEPT3Q9UH03 358 aa7.73□□□□□ -1.17
LINC00534-201ENST00000517400 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
LINC00534-201ENST00000517400 GNASQ5JWF2 1037 aa7.72□□□□□ -1.17
LINC00534-201ENST00000517400 SND1Q7KZF4 910 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00534-201ENST00000517400 TRIM46Q7Z4K8 759 aa7.72□□□□□ -1.17
LINC00534-201ENST00000517400 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
LINC00534-201ENST00000517400 GTF3C2Q8WUA4 911 aaPredicted RBP7.72□□□□□ -1.17
LINC00534-201ENST00000517400 L3MBTL2Q969R5 705 aa7.72□□□□□ -1.17
LINC00534-201ENST00000517400 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
LINC00534-201ENST00000517400 DACH1Q9UI36 760 aa7.72□□□□□ -1.17
LINC00534-201ENST00000517400 BMP1P13497 986 aa7.71□□□□□ -1.18
LINC00534-201ENST00000517400 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
LINC00534-201ENST00000517400 WDR44Q5JSH3 913 aa7.71□□□□□ -1.18
LINC00534-201ENST00000517400 TMCO4Q5TGY1 634 aa7.71□□□□□ -1.18
LINC00534-201ENST00000517400 SOS2Q07890 1332 aaPredicted RBP7.71□□□□□ -1.18
LINC00534-201ENST00000517400 ICMTO60725 284 aa7.7□□□□□ -1.18
LINC00534-201ENST00000517400 ABL1P00519 1130 aa7.7□□□□□ -1.18
LINC00534-201ENST00000517400 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00534-201ENST00000517400 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
LINC00534-201ENST00000517400 C4orf17Q53FE4 359 aa7.7□□□□□ -1.18
LINC00534-201ENST00000517400 C16orf46Q6P387 395 aa7.7□□□□□ -1.18
LINC00534-201ENST00000517400 LYSMD3Q7Z3D4 306 aa7.7□□□□□ -1.18
LINC00534-201ENST00000517400 ZNF232Q9UNY5 417 aa7.7□□□□□ -1.18
LINC00534-201ENST00000517400 CCDC9Q9Y3X0 531 aaKnown RBP7.7□□□□□ -1.18
LINC00534-201ENST00000517400 TTLL8A6PVC2 850 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 SH3PXD2AQ5TCZ1 1133 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 C1orf53Q5VUE5 145 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 ALDH16A1Q8IZ83 802 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 HELQQ8TDG4 1101 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 MYO19Q96H55 970 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 ZFP42Q96MM3 310 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 QTRT2Q9H974 415 aaKnown RBP7.69□□□□□ -1.18
LINC00534-201ENST00000517400 PARP3Q9Y6F1 533 aa7.69□□□□□ -1.18
LINC00534-201ENST00000517400 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
LINC00534-201ENST00000517400 NPR3P17342 541 aa7.68□□□□□ -1.18
LINC00534-201ENST00000517400 POU4F2Q12837 409 aa7.68□□□□□ -1.18
LINC00534-201ENST00000517400 COX20Q5RI15 118 aa7.68□□□□□ -1.18
LINC00534-201ENST00000517400 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
LINC00534-201ENST00000517400 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
LINC00534-201ENST00000517400 SAP130Q9H0E3 1048 aa7.68□□□□□ -1.18
LINC00534-201ENST00000517400 HCN4Q9Y3Q4 1203 aa7.68□□□□□ -1.18
LINC00534-201ENST00000517400 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
LINC00534-201ENST00000517400 ZNF211Q13398 564 aaPredicted RBP7.67□□□□□ -1.18
LINC00534-201ENST00000517400 RTN1Q16799 776 aa7.67□□□□□ -1.18
LINC00534-201ENST00000517400 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
LINC00534-201ENST00000517400 ZDHHC3Q9NYG2 299 aa7.67□□□□□ -1.18
LINC00534-201ENST00000517400 H3BRB1 525 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 TXLNAP40222 546 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
LINC00534-201ENST00000517400 ECM1Q16610 540 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 CCDC27Q2M243 656 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 PHACTR1Q9C0D0 580 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 TUT1Q9H6E5 874 aaKnown RBP7.66□□□□□ -1.18
LINC00534-201ENST00000517400 ANO2Q9NQ90 1003 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 LRFN2Q9ULH4 789 aa7.66□□□□□ -1.18
LINC00534-201ENST00000517400 PHKA2P46019 1235 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 MTMR3Q13615 1198 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 C11orf91Q3C1V1 193 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 GLYCTKQ8IVS8 523 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 C7orf43Q8WVR3 580 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 AIDAQ96BJ3 306 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 NGLY1Q96IV0 654 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 STIM2Q9P246 746 aa7.65□□□□□ -1.18
LINC00534-201ENST00000517400 FIGNL2A6NMB9 653 aa7.64□□□□□ -1.19
LINC00534-201ENST00000517400 TNFRSF10BO14763 440 aa7.64□□□□□ -1.19
LINC00534-201ENST00000517400 FAM13AO94988 1023 aa7.64□□□□□ -1.19
LINC00534-201ENST00000517400 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.64□□□□□ -1.19
LINC00534-201ENST00000517400 LCE2AQ5TA79 106 aaPredicted RBP7.64□□□□□ -1.19
LINC00534-201ENST00000517400 BIN2Q9UBW5 565 aaPredicted RBP7.64□□□□□ -1.19
LINC00534-201ENST00000517400 DNMT3LQ9UJW3 386 aa7.64□□□□□ -1.19
LINC00534-201ENST00000517400 GPC6Q9Y625 555 aaPredicted RBP7.64□□□□□ -1.19
LINC00534-201ENST00000517400 UNC13AQ9UPW8 1703 aa7.64□□□□□ -1.19
LINC00534-201ENST00000517400 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
LINC00534-201ENST00000517400 TATP17735 454 aaPredicted RBP7.63□□□□□ -1.19
LINC00534-201ENST00000517400 BRD2P25440 801 aaKnown RBP7.63□□□□□ -1.19
LINC00534-201ENST00000517400 TIMMDC1Q9NPL8 285 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms