RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 LIAT1Q6ZQX7 453 aa5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 GJD3Q8N144 294 aa5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 KDF1Q8NAX2 398 aaPredicted RBP5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 RNF166Q96A37 237 aaPredicted RBP5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 PRKD2Q9BZL6 878 aa5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 SAP130Q9H0E3 1048 aa5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 ARHGEF10LQ9HCE6 1279 aa5.43□□□□□ -1.54
RNU6-840P-201ENST00000517275 PDE3BQ13370 1112 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 NAA30Q147X3 362 aaPredicted RBP5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 ARID5BQ14865 1188 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 TLR1Q15399 786 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 RTN1Q16799 776 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 MRGPRX2Q96LB1 330 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 KLF16Q9BXK1 252 aaPredicted RBP5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 SERTAD1Q9UHV2 236 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 BRPF3Q9ULD4 1205 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 CHMP3Q9Y3E7 222 aa5.42□□□□□ -1.54
RNU6-840P-201ENST00000517275 PRPF40AO75400 957 aaKnown RBP5.41□□□□□ -1.54
RNU6-840P-201ENST00000517275 USP5P45974 858 aa5.41□□□□□ -1.54
RNU6-840P-201ENST00000517275 CNKSR1Q969H4 720 aa5.41□□□□□ -1.54
RNU6-840P-201ENST00000517275 LRFN2Q9ULH4 789 aa5.41□□□□□ -1.54
RNU6-840P-201ENST00000517275 GPC6Q9Y625 555 aaPredicted RBP5.41□□□□□ -1.54
RNU6-840P-201ENST00000517275 USP3Q9Y6I4 520 aa5.41□□□□□ -1.54
RNU6-840P-201ENST00000517275 GPR182O15218 404 aa5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 BRD2P25440 801 aaKnown RBP5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 GPC1P35052 558 aa5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 NNTQ13423 1086 aa5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 C1orf53Q5VUE5 145 aa5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 PPARGC1BQ86YN6 1023 aaKnown RBP5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 ZDHHC1Q8WTX9 485 aa5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 RAB6BQ9NRW1 208 aa5.4□□□□□ -1.54
RNU6-840P-201ENST00000517275 SERTM1A2A2V5 107 aa5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 MZF1P28698 734 aaPredicted RBP5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 PTGIRP43119 386 aa5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 TAGLNQ01995 201 aaKnown RBP5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 EHHADHQ08426 723 aa5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 SPRYD7Q5W111 196 aa5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 CHMP7Q8WUX9 453 aaPredicted RBP5.39□□□□□ -1.55
RNU6-840P-201ENST00000517275 NOS2P35228 1153 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 SLC19A1P41440 591 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZC3H6P61129 1189 aaKnown RBP5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 ENOX2Q16206 610 aaKnown RBP5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 HIF1AQ16665 826 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 LDLRAD1Q5T700 205 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 IER5Q5VY09 327 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 TMC4Q7Z404 712 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZNF598Q86UK7 904 aaKnown RBP5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 ALDH16A1Q8IZ83 802 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 FBF1Q8TES7 1133 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 CCDC87Q9NVE4 849 aa5.38□□□□□ -1.55
RNU6-840P-201ENST00000517275 SCAMP3O14828 347 aaKnown RBP5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 CENPCQ03188 943 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 C11orf91Q3C1V1 193 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 FAM26DQ5JW98 314 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 TBCELQ5QJ74 424 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 ETFBKMTQ8IXQ9 262 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 MEIOBQ8N635 442 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 RHBDD1Q8TEB9 315 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 METTL5Q9NRN9 209 aaKnown RBP5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZDHHC3Q9NYG2 299 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 PKD2L1Q9P0L9 805 aa5.37□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZBTB39O15060 712 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 LDHBP07195 334 aaKnown RBP5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 TIMP2P16035 220 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 DAB2P98082 770 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 SH3PXD2AQ5TCZ1 1133 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 ALG1LQ6GMV1 187 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 SNIP1Q8TAD8 396 aaKnown RBP5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 L3MBTL2Q969R5 705 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 NIFKQ9BYG3 293 aaKnown RBP5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 V9GY48 417 aaPredicted RBP5.36□□□□□ -1.55
RNU6-840P-201ENST00000517275 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 ALDH1A1P00352 501 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 PDGFAP04085 211 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZAP70P43403 619 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 ATP2B2Q01814 1243 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 PLCB3Q01970 1234 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 DGKZQ13574 1117 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZNF697Q5TEC3 545 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 SPNS2Q8IVW8 549 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 C7orf43Q8WVR3 580 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 FRMD6Q96NE9 622 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 ZSCAN10Q96SZ4 725 aaPredicted RBP5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 PHACTR1Q9C0D0 580 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 GRIP2Q9C0E4 1043 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 FAM13BQ9NYF5 915 aa5.35□□□□□ -1.55
RNU6-840P-201ENST00000517275 TGFBR3LH3BV60 316 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 RNF144AP50876 292 aaPredicted RBP5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 CBLBQ13191 982 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 CFHR5Q9BXR6 569 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 BACH2Q9BYV9 841 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 DNAJC25Q9H1X3 360 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 PARP2Q9UGN5 583 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 POLIQ9UNA4 740 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 WASF2Q9Y6W5 498 aa5.34□□□□□ -1.55
RNU6-840P-201ENST00000517275 A0A0G2JS52 829 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 LOC105371045A0A1W2PR82 267 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms