RNA–Protein interactions for RNA: ENST00000516549.1

RN7SKP135-201, Transcript of RNA, 7SK small nuclear pseudogene 135, humanhuman

BASIC

Gene RN7SKP135, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP135-201ENST00000516549 ARXQ96QS3 562 aa14.37□□□□□ -0.11
RN7SKP135-201ENST00000516549 KCPQ6ZWJ8 1503 aa14.36□□□□□ -0.11
RN7SKP135-201ENST00000516549 SLC39A6Q13433 755 aa14.36□□□□□ -0.11
RN7SKP135-201ENST00000516549 SLC4A9Q96Q91 983 aa14.36□□□□□ -0.11
RN7SKP135-201ENST00000516549 SGIP1Q9BQI5 828 aa14.36□□□□□ -0.11
RN7SKP135-201ENST00000516549 MYH14Q7Z406 1995 aaKnown RBP14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 GABBR2O75899 941 aa14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 NFE2L2Q16236 605 aa14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 PLEKHF1Q96S99 279 aa14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 TEX13AQ9BXU3 409 aaPredicted RBP14.35□□□□□ -0.11
RN7SKP135-201ENST00000516549 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
RN7SKP135-201ENST00000516549 RPS6KA4O75676 772 aa14.34□□□□□ -0.11
RN7SKP135-201ENST00000516549 CRKLP46109 303 aaKnown RBP14.34□□□□□ -0.11
RN7SKP135-201ENST00000516549 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
RN7SKP135-201ENST00000516549 SRCAPQ6ZRS2 3230 aa14.34□□□□□ -0.11
RN7SKP135-201ENST00000516549 STARD3NLO95772 234 aa14.33□□□□□ -0.12
RN7SKP135-201ENST00000516549 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
RN7SKP135-201ENST00000516549 MCM10Q7L590 875 aa14.33□□□□□ -0.12
RN7SKP135-201ENST00000516549 DNAJC10Q8IXB1 793 aa14.33□□□□□ -0.12
RN7SKP135-201ENST00000516549 PNISRQ8TF01 805 aaKnown RBP14.33□□□□□ -0.12
RN7SKP135-201ENST00000516549 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
RN7SKP135-201ENST00000516549 ANP32CO43423 234 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 RFC4P35249 363 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 LHX8Q68G74 356 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 FHDC1Q9C0D6 1143 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 HEG1Q9ULI3 1381 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
RN7SKP135-201ENST00000516549 CYP19A1P11511 503 aaPredicted RBP14.31□□□□□ -0.12
RN7SKP135-201ENST00000516549 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
RN7SKP135-201ENST00000516549 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
RN7SKP135-201ENST00000516549 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
RN7SKP135-201ENST00000516549 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
RN7SKP135-201ENST00000516549 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
RN7SKP135-201ENST00000516549 NLGN1Q8N2Q7 840 aa14.3□□□□□ -0.12
RN7SKP135-201ENST00000516549 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
RN7SKP135-201ENST00000516549 SYT17Q9BSW7 474 aa14.3□□□□□ -0.12
RN7SKP135-201ENST00000516549 RIPK4P57078 832 aa14.29□□□□□ -0.12
RN7SKP135-201ENST00000516549 INTS5Q6P9B9 1019 aaKnown RBP14.29□□□□□ -0.12
RN7SKP135-201ENST00000516549 NPM2Q86SE8 214 aaKnown RBP14.29□□□□□ -0.12
RN7SKP135-201ENST00000516549 ARHGEF1Q92888 912 aaKnown RBP14.29□□□□□ -0.12
RN7SKP135-201ENST00000516549 SSUH2Q9Y2M2 353 aa14.29□□□□□ -0.12
RN7SKP135-201ENST00000516549 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
RN7SKP135-201ENST00000516549 KDM3BQ7LBC6 1761 aa14.28□□□□□ -0.12
RN7SKP135-201ENST00000516549 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
RN7SKP135-201ENST00000516549 A0A087WZG4 1122 aa14.27□□□□□ -0.13
RN7SKP135-201ENST00000516549 ZPR1O75312 459 aa14.27□□□□□ -0.13
RN7SKP135-201ENST00000516549 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.13
RN7SKP135-201ENST00000516549 SMIM5Q71RC9 77 aa14.27□□□□□ -0.13
RN7SKP135-201ENST00000516549 ADAMTS8Q9UP79 889 aa14.27□□□□□ -0.13
RN7SKP135-201ENST00000516549 COL15A1P39059 1388 aa14.26□□□□□ -0.13
RN7SKP135-201ENST00000516549 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
RN7SKP135-201ENST00000516549 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP135-201ENST00000516549 CCDC146Q8IYE0 955 aa14.26□□□□□ -0.13
RN7SKP135-201ENST00000516549 ZBTB1Q9Y2K1 713 aa14.26□□□□□ -0.13
RN7SKP135-201ENST00000516549 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
RN7SKP135-201ENST00000516549 LAMB4A4D0S4 1761 aa14.25□□□□□ -0.13
RN7SKP135-201ENST00000516549 MMP10P09238 476 aa14.25□□□□□ -0.13
RN7SKP135-201ENST00000516549 GYS1P13807 737 aa14.25□□□□□ -0.13
RN7SKP135-201ENST00000516549 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
RN7SKP135-201ENST00000516549 BABAM1Q9NWV8 329 aa14.25□□□□□ -0.13
RN7SKP135-201ENST00000516549 KCNQ3O43525 872 aa14.24□□□□□ -0.13
RN7SKP135-201ENST00000516549 IL6STP40189 918 aaPredicted RBP14.24□□□□□ -0.13
RN7SKP135-201ENST00000516549 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
RN7SKP135-201ENST00000516549 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
RN7SKP135-201ENST00000516549 NARFQ9UHQ1 456 aa14.23□□□□□ -0.13
RN7SKP135-201ENST00000516549 PARP3Q9Y6F1 533 aa14.23□□□□□ -0.13
RN7SKP135-201ENST00000516549 EIF5P55010 431 aaKnown RBP14.22□□□□□ -0.13
RN7SKP135-201ENST00000516549 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
RN7SKP135-201ENST00000516549 TSPYL4Q9UJ04 414 aa14.22□□□□□ -0.13
RN7SKP135-201ENST00000516549 RRP7AQ9Y3A4 280 aaKnown RBP14.22□□□□□ -0.13
RN7SKP135-201ENST00000516549 ZNF330Q9Y3S2 320 aaPredicted RBP14.22□□□□□ -0.13
RN7SKP135-201ENST00000516549 KIF13BQ9NQT8 1826 aa14.21□□□□□ -0.13
RN7SKP135-201ENST00000516549 CALD1Q05682 793 aaKnown RBP14.21□□□□□ -0.13
RN7SKP135-201ENST00000516549 USPL1Q5W0Q7 1092 aa14.21□□□□□ -0.13
RN7SKP135-201ENST00000516549 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.13
RN7SKP135-201ENST00000516549 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
RN7SKP135-201ENST00000516549 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
RN7SKP135-201ENST00000516549 A1BGP04217 495 aa14.2□□□□□ -0.14
RN7SKP135-201ENST00000516549 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
RN7SKP135-201ENST00000516549 FKBP8Q14318 412 aa14.2□□□□□ -0.14
RN7SKP135-201ENST00000516549 GPR162Q16538 588 aa14.2□□□□□ -0.14
RN7SKP135-201ENST00000516549 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
RN7SKP135-201ENST00000516549 GIGYF1O75420 1035 aaPredicted RBP14.19□□□□□ -0.14
RN7SKP135-201ENST00000516549 NLGN2Q8NFZ4 835 aa14.19□□□□□ -0.14
RN7SKP135-201ENST00000516549 CHD4Q14839 1912 aa14.19□□□□□ -0.14
RN7SKP135-201ENST00000516549 C10orf71Q711Q0 1435 aa14.18□□□□□ -0.14
RN7SKP135-201ENST00000516549 APAF1O14727 1248 aa14.18□□□□□ -0.14
RN7SKP135-201ENST00000516549 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
RN7SKP135-201ENST00000516549 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
RN7SKP135-201ENST00000516549 ZNF652Q9Y2D9 606 aa14.18□□□□□ -0.14
RN7SKP135-201ENST00000516549 BCORQ6W2J9 1755 aa14.18□□□□□ -0.14
RN7SKP135-201ENST00000516549 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
RN7SKP135-201ENST00000516549 GRIN3BO60391 1043 aa14.17□□□□□ -0.14
RN7SKP135-201ENST00000516549 TGFB2P61812 414 aa14.17□□□□□ -0.14
RN7SKP135-201ENST00000516549 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
RN7SKP135-201ENST00000516549 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms