RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
RN7SKP248-201ENST00000516278 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
RN7SKP248-201ENST00000516278 SLC16A10Q8TF71 515 aa8.74□□□□□ -1.01
RN7SKP248-201ENST00000516278 SENP3-EIF4A1A0A087X0R7 540 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L15C9J2P7 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L13C9JLJ4 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L12C9JPN9 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L11C9JVI0 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L21D6R901 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L18D6R9N7 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L22D6RA61 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L17D6RBQ6 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L19D6RCP7 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L20D6RJB6 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 USP17L24Q0WX57 530 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 CDCA8Q53HL2 280 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 ANKMY2Q8IV38 441 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 DYRK1BQ9Y463 629 aa8.73□□□□□ -1.01
RN7SKP248-201ENST00000516278 DPYDQ12882 1025 aa8.72□□□□□ -1.01
RN7SKP248-201ENST00000516278 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
RN7SKP248-201ENST00000516278 NIFKQ9BYG3 293 aaKnown RBP8.72□□□□□ -1.01
RN7SKP248-201ENST00000516278 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
RN7SKP248-201ENST00000516278 SCHIP1Q9P0W5 487 aaPredicted RBP8.72□□□□□ -1.01
RN7SKP248-201ENST00000516278 SYNJ1O43426 1573 aa8.72□□□□□ -1.01
RN7SKP248-201ENST00000516278 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.01
RN7SKP248-201ENST00000516278 PRXQ9BXM0 1461 aa8.71□□□□□ -1.01
RN7SKP248-201ENST00000516278 H3BM21 787 aa8.71□□□□□ -1.02
RN7SKP248-201ENST00000516278 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.02
RN7SKP248-201ENST00000516278 C4orf17Q53FE4 359 aa8.71□□□□□ -1.02
RN7SKP248-201ENST00000516278 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
RN7SKP248-201ENST00000516278 IQSEC3Q9UPP2 1182 aaPredicted RBP8.71□□□□□ -1.02
RN7SKP248-201ENST00000516278 TOP2BQ02880 1626 aa8.71□□□□□ -1.02
RN7SKP248-201ENST00000516278 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP248-201ENST00000516278 SFI1A8K8P3 1242 aa8.7□□□□□ -1.02
RN7SKP248-201ENST00000516278 WFS1O76024 890 aa8.7□□□□□ -1.02
RN7SKP248-201ENST00000516278 EPHA4P54764 986 aa8.7□□□□□ -1.02
RN7SKP248-201ENST00000516278 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
RN7SKP248-201ENST00000516278 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
RN7SKP248-201ENST00000516278 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 ATG7O95352 703 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 ITGA6P23229 1130 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 PHKA2P46019 1235 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 VEGFBP49765 207 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 FOXK2Q01167 660 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 ELOAQ14241 798 aaKnown RBP8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 FAM200AQ8TCP9 573 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 ARXQ96QS3 562 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 RAPGEF2Q9Y4G8 1499 aa8.69□□□□□ -1.02
RN7SKP248-201ENST00000516278 PPP1R15AO75807 674 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 F11P03951 625 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 SLC9A9Q8IVB4 645 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 TSEN2Q8NCE0 465 aaKnown RBP8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 NANOS1Q8WY41 292 aaKnown RBP8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 IRF7Q92985 503 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
RN7SKP248-201ENST00000516278 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 GAS2L1Q99501 681 aaPredicted RBP8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
RN7SKP248-201ENST00000516278 ARAP1Q96P48 1450 aa8.66□□□□□ -1.02
RN7SKP248-201ENST00000516278 H7C1W4 665 aa8.66□□□□□ -1.02
RN7SKP248-201ENST00000516278 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
RN7SKP248-201ENST00000516278 TEAD4Q15561 434 aa8.66□□□□□ -1.02
RN7SKP248-201ENST00000516278 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
RN7SKP248-201ENST00000516278 USP3Q9Y6I4 520 aa8.66□□□□□ -1.02
RN7SKP248-201ENST00000516278 RAB3GAP2Q9H2M9 1393 aa8.65□□□□□ -1.02
RN7SKP248-201ENST00000516278 VSIG8P0DPA2 414 aa8.65□□□□□ -1.02
RN7SKP248-201ENST00000516278 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
RN7SKP248-201ENST00000516278 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
RN7SKP248-201ENST00000516278 TSPAN10Q9H1Z9 355 aaPredicted RBP8.65□□□□□ -1.02
RN7SKP248-201ENST00000516278 CHMP3Q9Y3E7 222 aa8.65□□□□□ -1.02
RN7SKP248-201ENST00000516278 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 NOS2P35228 1153 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 PSMA6P60900 246 aaKnown RBP8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 VWA5B2Q8N398 1253 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 USP35Q9P2H5 1018 aa8.64□□□□□ -1.03
RN7SKP248-201ENST00000516278 SERTM1A2A2V5 107 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 CSB-PGBD3P0DP91 1061 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 MSX1P28360 303 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 PGBD3Q8N328 593 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 L3MBTL2Q969R5 705 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 ZNF232Q9UNY5 417 aa8.63□□□□□ -1.03
RN7SKP248-201ENST00000516278 CDC14CA4D256 554 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 TATP17735 454 aaPredicted RBP8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 LBRQ14739 615 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms