RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 MCCD1P59942 119 aaPredicted RBP5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 TNP2Q05952 138 aa5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 COL9A3Q14050 684 aaPredicted RBP5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 TMEM214Q6NUQ4 689 aaKnown RBP5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 RHBDD1Q8TEB9 315 aa5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 PRDM6Q9NQX0 595 aa5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 PCDHB11Q9Y5F2 797 aa5.22□□□□□ -1.57
RNU6-1278P-201ENST00000516130 ELOA3CA0A087WX78 387 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ELOA3DA6NLF2 546 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ATXN7O15265 892 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 USP17L8P0C7I0 530 aa5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 MAPTP10636 758 aaKnown RBP5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 SKIV2LQ15477 1246 aaKnown RBP5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ELOA3BQ3SY89 546 aa5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 PPARGC1BQ86YN6 1023 aaKnown RBP5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ELOA3Q8NG57 546 aa5.21□□□□□ -1.58
RNU6-1278P-201ENST00000516130 FBXO45P0C2W1 286 aa5.2□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ELNP15502 786 aa5.2□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ATP4AP20648 1035 aa5.2□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ADGRE1Q14246 886 aa5.2□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ZNF592Q92610 1267 aa5.2□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ESF1Q9H501 851 aaKnown RBP5.2□□□□□ -1.58
RNU6-1278P-201ENST00000516130 CD33P20138 364 aa5.19□□□□□ -1.58
RNU6-1278P-201ENST00000516130 PCBP4P57723 403 aaKnown RBP5.19□□□□□ -1.58
RNU6-1278P-201ENST00000516130 TBC1D9Q6ZT07 1266 aa5.19□□□□□ -1.58
RNU6-1278P-201ENST00000516130 TRIM34Q9BYJ4 488 aa5.19□□□□□ -1.58
RNU6-1278P-201ENST00000516130 C9orf172C9J069 976 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 FAM157BP0CG42 384 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ALAS2P22557 587 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 TRIM28Q13263 835 aaKnown RBP5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 MBTPS1Q14703 1052 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ESCO1Q5FWF5 840 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 SH3D19Q5HYK7 790 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 RNF112Q9ULX5 631 aa5.18□□□□□ -1.58
RNU6-1278P-201ENST00000516130 DCDC2BA2VCK2 349 aa5.17□□□□□ -1.58
RNU6-1278P-201ENST00000516130 ADARB2-AS1A8MUL3 147 aa5.17□□□□□ -1.58
RNU6-1278P-201ENST00000516130 FAM229AH3BQW9 127 aa5.17□□□□□ -1.58
RNU6-1278P-201ENST00000516130 TXNRD3Q86VQ6 643 aa5.17□□□□□ -1.58
RNU6-1278P-201ENST00000516130 PRR12Q9ULL5 1215 aa5.17□□□□□ -1.58
RNU6-1278P-201ENST00000516130 NID1P14543 1247 aa5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 HAP1P54257 671 aaPredicted RBP5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 LAMC2Q13753 1193 aa5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 GRIK4Q16099 956 aa5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 SAMD5Q5TGI4 173 aa5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 PROCA1Q8NCQ7 364 aaPredicted RBP5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 SSBP4Q9BWG4 385 aaPredicted RBP5.16□□□□□ -1.58
RNU6-1278P-201ENST00000516130 M0R082 166 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 KHNYNO15037 678 aaKnown RBP5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 EFSO43281 561 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 SIN3BO75182 1162 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 MYCP01106 439 aaPredicted RBP5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 SELPP16109 830 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 PLA2G4AP47712 749 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 FZD5Q13467 585 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ZNF417Q8TAU3 575 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ZNF587Q96SQ5 575 aaPredicted RBP5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
RNU6-1278P-201ENST00000516130 A0A1W2PNR3 127 aa5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 NRG1Q02297 640 aaPredicted RBP5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 TNFRSF25Q93038 417 aa5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 LENG1Q96BZ8 264 aaPredicted RBP5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 MARK1Q9P0L2 795 aa5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ATP1B4Q9UN42 357 aaPredicted RBP5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 STARD13Q9Y3M8 1113 aa5.14□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ALBP02768 609 aa5.13□□□□□ -1.59
RNU6-1278P-201ENST00000516130 NR1H3Q13133 447 aa5.13□□□□□ -1.59
RNU6-1278P-201ENST00000516130 TLR1Q15399 786 aa5.13□□□□□ -1.59
RNU6-1278P-201ENST00000516130 SYT9Q86SS6 491 aa5.13□□□□□ -1.59
RNU6-1278P-201ENST00000516130 MICALL1Q8N3F8 863 aa5.13□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ZNF295-AS1Q8N0V1 137 aa5.12□□□□□ -1.59
RNU6-1278P-201ENST00000516130 VSIG10Q8N0Z9 540 aa5.12□□□□□ -1.59
RNU6-1278P-201ENST00000516130 TP53INP1Q96A56 240 aa5.12□□□□□ -1.59
RNU6-1278P-201ENST00000516130 NIFKQ9BYG3 293 aaKnown RBP5.12□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ETNK1Q9HBU6 452 aa5.12□□□□□ -1.59
RNU6-1278P-201ENST00000516130 STRN4Q9NRL3 753 aa5.12□□□□□ -1.59
RNU6-1278P-201ENST00000516130 C20orf204Q6ZNR8 217 aa5.11□□□□□ -1.59
RNU6-1278P-201ENST00000516130 CDCA7Q9BWT1 371 aaPredicted RBP5.11□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ZDHHC3Q9NYG2 299 aa5.11□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ZNF330Q9Y3S2 320 aaPredicted RBP5.11□□□□□ -1.59
RNU6-1278P-201ENST00000516130 RFC5P40937 340 aa5.1□□□□□ -1.59
RNU6-1278P-201ENST00000516130 NBPF1Q3BBV0 1214 aa5.1□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ARSJQ5FYB0 599 aaPredicted RBP5.1□□□□□ -1.59
RNU6-1278P-201ENST00000516130 GJD4Q96KN9 370 aaPredicted RBP5.1□□□□□ -1.59
RNU6-1278P-201ENST00000516130 CCDC85AQ96PX6 553 aaPredicted RBP5.1□□□□□ -1.59
RNU6-1278P-201ENST00000516130 ZIC5Q96T25 663 aa5.1□□□□□ -1.59
RNU6-1278P-201ENST00000516130 A0A0A0MRY4 1105 aa5.09□□□□□ -1.59
RNU6-1278P-201ENST00000516130 IRAK1P51617 712 aa5.09□□□□□ -1.59
RNU6-1278P-201ENST00000516130 C8orf86Q6ZUL3 223 aa5.09□□□□□ -1.59
RNU6-1278P-201ENST00000516130 SLC51AQ86UW1 340 aa5.09□□□□□ -1.59
RNU6-1278P-201ENST00000516130 AIDAQ96BJ3 306 aa5.09□□□□□ -1.59
RNU6-1278P-201ENST00000516130 PCMTD2Q9NV79 361 aa5.09□□□□□ -1.59
RNU6-1278P-201ENST00000516130 TATP17735 454 aaPredicted RBP5.08□□□□□ -1.6
RNU6-1278P-201ENST00000516130 TRAPPC3LQ5T215 181 aa5.08□□□□□ -1.6
RNU6-1278P-201ENST00000516130 STAU1O95793 577 aaKnown RBP5.07□□□□□ -1.6
RNU6-1278P-201ENST00000516130 ADH7P40394 386 aa5.07□□□□□ -1.6
RNU6-1278P-201ENST00000516130 ILDR2Q71H61 639 aa5.07□□□□□ -1.6
RNU6-1278P-201ENST00000516130 GJA3Q9Y6H8 435 aa5.07□□□□□ -1.6
RNU6-1278P-201ENST00000516130 LILRB5O75023 590 aa5.06□□□□□ -1.6
RNU6-1278P-201ENST00000516130 INHAP05111 366 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms