RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 HCN2Q9UL51 889 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 PCDHGC4Q9Y5F7 938 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 USP3Q9Y6I4 520 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
HERC4-215ENST00000515753 EPXP11678 715 aa7.16□□□□□ -1.26
HERC4-215ENST00000515753 BAG6P46379 1132 aa7.16□□□□□ -1.26
HERC4-215ENST00000515753 SEMA3FQ13275 785 aa7.16□□□□□ -1.26
HERC4-215ENST00000515753 FIGNL1Q6PIW4 674 aa7.16□□□□□ -1.26
HERC4-215ENST00000515753 BTBD6Q96KE9 485 aa7.16□□□□□ -1.26
HERC4-215ENST00000515753 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
HERC4-215ENST00000515753 A0A1W2PNR3 127 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 TMEM229AB2RXF0 380 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 PIK3CDO00329 1044 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 FURINP09958 794 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 CD33P20138 364 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 MAP7D1Q3KQU3 841 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 PARP3Q9Y6F1 533 aa7.15□□□□□ -1.26
HERC4-215ENST00000515753 KHNYNO15037 678 aaKnown RBP7.14□□□□□ -1.27
HERC4-215ENST00000515753 ARAFP10398 606 aa7.14□□□□□ -1.27
HERC4-215ENST00000515753 MAPTP10636 758 aaKnown RBP7.14□□□□□ -1.27
HERC4-215ENST00000515753 NLRP8Q86W28 1048 aa7.14□□□□□ -1.27
HERC4-215ENST00000515753 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
HERC4-215ENST00000515753 KLF15Q9UIH9 416 aa7.14□□□□□ -1.27
HERC4-215ENST00000515753 A6NJY4 79 aa7.13□□□□□ -1.27
HERC4-215ENST00000515753 K7ELQ4 463 aaPredicted RBP7.13□□□□□ -1.27
HERC4-215ENST00000515753 TNP2Q05952 138 aa7.13□□□□□ -1.27
HERC4-215ENST00000515753 WASHC4Q2M389 1173 aa7.13□□□□□ -1.27
HERC4-215ENST00000515753 ZNF295-AS1Q8N0V1 137 aa7.13□□□□□ -1.27
HERC4-215ENST00000515753 C1orf216Q8TAB5 229 aa7.13□□□□□ -1.27
HERC4-215ENST00000515753 GNB5O14775 395 aa7.12□□□□□ -1.27
HERC4-215ENST00000515753 DGKGP49619 791 aa7.12□□□□□ -1.27
HERC4-215ENST00000515753 NBPF1Q3BBV0 1214 aa7.12□□□□□ -1.27
HERC4-215ENST00000515753 ZIC5Q96T25 663 aa7.12□□□□□ -1.27
HERC4-215ENST00000515753 IQSEC3Q9UPP2 1182 aaPredicted RBP7.12□□□□□ -1.27
HERC4-215ENST00000515753 PCDHGA11Q9Y5H2 935 aa7.12□□□□□ -1.27
HERC4-215ENST00000515753 C1QTNF9BB2RNN3 333 aa7.11□□□□□ -1.27
HERC4-215ENST00000515753 CDK2AP1O14519 115 aa7.11□□□□□ -1.27
HERC4-215ENST00000515753 TATP17735 454 aaPredicted RBP7.11□□□□□ -1.27
HERC4-215ENST00000515753 PCBP4P57723 403 aaKnown RBP7.11□□□□□ -1.27
HERC4-215ENST00000515753 CHSY3Q70JA7 882 aa7.11□□□□□ -1.27
HERC4-215ENST00000515753 FCHSD1Q86WN1 690 aa7.11□□□□□ -1.27
HERC4-215ENST00000515753 SLC4A9Q96Q91 983 aa7.11□□□□□ -1.27
HERC4-215ENST00000515753 GJA3Q9Y6H8 435 aa7.11□□□□□ -1.27
HERC4-215ENST00000515753 ADH6P28332 368 aa7.1□□□□□ -1.27
HERC4-215ENST00000515753 TXLNAP40222 546 aa7.1□□□□□ -1.27
HERC4-215ENST00000515753 MTFR1Q15390 333 aa7.1□□□□□ -1.27
HERC4-215ENST00000515753 BICDL1Q6ZP65 573 aa7.1□□□□□ -1.27
HERC4-215ENST00000515753 ALYREFQ86V81 257 aaKnown RBP7.1□□□□□ -1.27
HERC4-215ENST00000515753 CD163Q86VB7 1156 aa7.1□□□□□ -1.27
HERC4-215ENST00000515753 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
HERC4-215ENST00000515753 STRN4Q9NRL3 753 aa7.1□□□□□ -1.27
HERC4-215ENST00000515753 SKIP12755 728 aa7.09□□□□□ -1.27
HERC4-215ENST00000515753 CHRNA4P43681 627 aa7.09□□□□□ -1.27
HERC4-215ENST00000515753 MCM6Q14566 821 aa7.09□□□□□ -1.27
HERC4-215ENST00000515753 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
HERC4-215ENST00000515753 PRR12Q9ULL5 1215 aa7.09□□□□□ -1.27
HERC4-215ENST00000515753 PIK3R2O00459 728 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 SOX11P35716 441 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 PSME1Q06323 249 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 EML3Q32P44 896 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 TBCELQ5QJ74 424 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 FAM182BQ5T319 152 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 DEPDC4Q8N2C3 294 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 ZDHHC1Q8WTX9 485 aa7.08□□□□□ -1.28
HERC4-215ENST00000515753 FAM157BP0CG42 384 aa7.07□□□□□ -1.28
HERC4-215ENST00000515753 GTF2IP78347 998 aa7.07□□□□□ -1.28
HERC4-215ENST00000515753 ZNF358Q9NW07 568 aa7.07□□□□□ -1.28
HERC4-215ENST00000515753 MARK1Q9P0L2 795 aa7.07□□□□□ -1.28
HERC4-215ENST00000515753 NOD1Q9Y239 953 aa7.07□□□□□ -1.28
HERC4-215ENST00000515753 COG6Q9Y2V7 657 aa7.07□□□□□ -1.28
HERC4-215ENST00000515753 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
HERC4-215ENST00000515753 BACH1O14867 736 aa7.06□□□□□ -1.28
HERC4-215ENST00000515753 NCOA4Q13772 614 aa7.06□□□□□ -1.28
HERC4-215ENST00000515753 ZNF468Q5VIY5 522 aaPredicted RBP7.06□□□□□ -1.28
HERC4-215ENST00000515753 LRRC69Q6ZNQ3 347 aa7.06□□□□□ -1.28
HERC4-215ENST00000515753 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
HERC4-215ENST00000515753 TRIM11Q96F44 468 aa7.06□□□□□ -1.28
HERC4-215ENST00000515753 NOP53Q9NZM5 478 aaKnown RBP7.06□□□□□ -1.28
HERC4-215ENST00000515753 SCHIP1Q9P0W5 487 aaPredicted RBP7.06□□□□□ -1.28
HERC4-215ENST00000515753 DOC2BQ14184 412 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 SH3PXD2AQ5TCZ1 1133 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 TNS4Q8IZW8 715 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 PLVAPQ9BX97 442 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 ALG2Q9H553 416 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 AVENQ9NQS1 362 aaPredicted RBP7.05□□□□□ -1.28
HERC4-215ENST00000515753 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
HERC4-215ENST00000515753 EFSO43281 561 aa7.04□□□□□ -1.28
HERC4-215ENST00000515753 NOS2P35228 1153 aa7.04□□□□□ -1.28
HERC4-215ENST00000515753 FLIIQ13045 1269 aa7.04□□□□□ -1.28
HERC4-215ENST00000515753 SYT9Q86SS6 491 aa7.04□□□□□ -1.28
HERC4-215ENST00000515753 SLC9A9Q8IVB4 645 aa7.04□□□□□ -1.28
HERC4-215ENST00000515753 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
HERC4-215ENST00000515753 SAMD5Q5TGI4 173 aa7.03□□□□□ -1.28
HERC4-215ENST00000515753 Q8N3U1 123 aa7.03□□□□□ -1.28
HERC4-215ENST00000515753 USP17L5A8MUK1 530 aa7.02□□□□□ -1.29
HERC4-215ENST00000515753 EPHA4P54764 986 aa7.02□□□□□ -1.29
HERC4-215ENST00000515753 SFSWAPQ12872 951 aaKnown RBP7.02□□□□□ -1.29
HERC4-215ENST00000515753 TEAD4Q15561 434 aa7.02□□□□□ -1.29
HERC4-215ENST00000515753 NEUROD4Q9HD90 331 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms