RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 DDB1Q16531 1140 aa11.22□□□□□ -0.61
CAST-244ENST00000515663 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
CAST-244ENST00000515663 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
CAST-244ENST00000515663 BCL9O00512 1426 aa11.21□□□□□ -0.61
CAST-244ENST00000515663 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
CAST-244ENST00000515663 PDIA6Q15084 440 aa11.21□□□□□ -0.61
CAST-244ENST00000515663 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
CAST-244ENST00000515663 ITPRIPQ8IWB1 547 aa11.21□□□□□ -0.61
CAST-244ENST00000515663 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.61
CAST-244ENST00000515663 USP21Q9UK80 565 aa11.21□□□□□ -0.61
CAST-244ENST00000515663 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
CAST-244ENST00000515663 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.62
CAST-244ENST00000515663 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 LRP10Q7Z4F1 713 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
CAST-244ENST00000515663 PIGBQ92521 554 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 DDX21Q9NR30 783 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAST-244ENST00000515663 TMOD3Q9NYL9 352 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 CHPF2Q9P2E5 772 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 UBR2Q8IWV8 1755 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
CAST-244ENST00000515663 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
CAST-244ENST00000515663 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
CAST-244ENST00000515663 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 PHAXQ9H814 394 aaKnown RBP11.19□□□□□ -0.62
CAST-244ENST00000515663 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 ATRNO75882 1429 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
CAST-244ENST00000515663 IGHDP01880 384 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 HDAC1Q13547 482 aaPredicted RBP11.19□□□□□ -0.62
CAST-244ENST00000515663 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 USP16Q9Y5T5 823 aa11.19□□□□□ -0.62
CAST-244ENST00000515663 AFF2P51816 1311 aa11.18□□□□□ -0.62
CAST-244ENST00000515663 THSD7AQ9UPZ6 1657 aa11.18□□□□□ -0.62
CAST-244ENST00000515663 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
CAST-244ENST00000515663 GJD4Q96KN9 370 aaPredicted RBP11.18□□□□□ -0.62
CAST-244ENST00000515663 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
CAST-244ENST00000515663 F6X3S4 739 aa11.17□□□□□ -0.62
CAST-244ENST00000515663 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
CAST-244ENST00000515663 PROSER3Q2NL68 480 aa11.17□□□□□ -0.62
CAST-244ENST00000515663 TEX13AQ9BXU3 409 aaPredicted RBP11.17□□□□□ -0.62
CAST-244ENST00000515663 C5P01031 1676 aa11.17□□□□□ -0.62
CAST-244ENST00000515663 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
CAST-244ENST00000515663 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
CAST-244ENST00000515663 RWDD1Q9H446 243 aaPredicted RBP11.16□□□□□ -0.62
CAST-244ENST00000515663 TRPC5Q9UL62 973 aaPredicted RBP11.16□□□□□ -0.62
CAST-244ENST00000515663 ASAP1Q9ULH1 1129 aa11.16□□□□□ -0.62
CAST-244ENST00000515663 ADCY9O60503 1353 aa11.16□□□□□ -0.62
CAST-244ENST00000515663 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
CAST-244ENST00000515663 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
CAST-244ENST00000515663 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
CAST-244ENST00000515663 KSR2Q6VAB6 950 aa11.15□□□□□ -0.62
CAST-244ENST00000515663 LAMB4A4D0S4 1761 aa11.15□□□□□ -0.63
CAST-244ENST00000515663 PI4KAP2A4QPH2 592 aa11.14□□□□□ -0.63
CAST-244ENST00000515663 ANXA1P04083 346 aa11.14□□□□□ -0.63
CAST-244ENST00000515663 SMC5Q8IY18 1101 aa11.14□□□□□ -0.63
CAST-244ENST00000515663 PI4KAP1Q8N8J0 262 aa11.14□□□□□ -0.63
CAST-244ENST00000515663 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
CAST-244ENST00000515663 ITGB4P16144 1822 aa11.14□□□□□ -0.63
CAST-244ENST00000515663 N4BP2Q86UW6 1770 aaPredicted RBP11.14□□□□□ -0.63
CAST-244ENST00000515663 NBPF26B4DH59 902 aa11.13□□□□□ -0.63
CAST-244ENST00000515663 PTCD1O75127 700 aaKnown RBP11.13□□□□□ -0.63
CAST-244ENST00000515663 DDX58O95786 925 aaKnown RBP11.13□□□□□ -0.63
CAST-244ENST00000515663 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
CAST-244ENST00000515663 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
CAST-244ENST00000515663 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
CAST-244ENST00000515663 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
CAST-244ENST00000515663 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
CAST-244ENST00000515663 MEIS3Q99687 375 aa11.13□□□□□ -0.63
CAST-244ENST00000515663 USP44Q9H0E7 712 aa11.13□□□□□ -0.63
CAST-244ENST00000515663 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 GNAI3P08754 354 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 CICQ96RK0 1608 aaPredicted RBP11.12□□□□□ -0.63
CAST-244ENST00000515663 COPS6Q7L5N1 327 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 XAGE3Q8WTP9 111 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 SRCIN1Q9C0H9 1055 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 QTRT2Q9H974 415 aaKnown RBP11.12□□□□□ -0.63
CAST-244ENST00000515663 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
CAST-244ENST00000515663 UTYO14607 1347 aa11.11□□□□□ -0.63
CAST-244ENST00000515663 A1BGP04217 495 aa11.11□□□□□ -0.63
CAST-244ENST00000515663 CYP19A1P11511 503 aaPredicted RBP11.11□□□□□ -0.63
CAST-244ENST00000515663 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
CAST-244ENST00000515663 DNAJC10Q8IXB1 793 aa11.11□□□□□ -0.63
CAST-244ENST00000515663 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
CAST-244ENST00000515663 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
CAST-244ENST00000515663 STARD3NLO95772 234 aa11.1□□□□□ -0.63
CAST-244ENST00000515663 MYL6BP14649 208 aa11.1□□□□□ -0.63
CAST-244ENST00000515663 CEP85Q6P2H3 762 aa11.1□□□□□ -0.63
CAST-244ENST00000515663 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
CAST-244ENST00000515663 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
CAST-244ENST00000515663 ZNF831Q5JPB2 1677 aa11.09□□□□□ -0.63
CAST-244ENST00000515663 KCNQ2O43526 872 aa11.09□□□□□ -0.63
CAST-244ENST00000515663 GNAI2P04899 355 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms