RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 ABCC10Q5T3U5 1492 aa8.68□□□□□ -1.02
CAST-243ENST00000515160 TNFRSF10AO00220 468 aa8.67□□□□□ -1.02
CAST-243ENST00000515160 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
CAST-243ENST00000515160 RECKO95980 971 aa8.67□□□□□ -1.02
CAST-243ENST00000515160 RAB15P59190 212 aa8.67□□□□□ -1.02
CAST-243ENST00000515160 NUP160Q12769 1436 aa8.67□□□□□ -1.02
CAST-243ENST00000515160 ABCA5Q8WWZ7 1642 aa8.67□□□□□ -1.02
CAST-243ENST00000515160 DIP2BQ9P265 1576 aa8.66□□□□□ -1.02
CAST-243ENST00000515160 WIPF1O43516 503 aa8.66□□□□□ -1.02
CAST-243ENST00000515160 GDF9O60383 454 aa8.66□□□□□ -1.02
CAST-243ENST00000515160 NPR3P17342 541 aa8.66□□□□□ -1.02
CAST-243ENST00000515160 ZC3H6P61129 1189 aaKnown RBP8.66□□□□□ -1.02
CAST-243ENST00000515160 TSNAXIP1Q2TAA8 658 aa8.66□□□□□ -1.02
CAST-243ENST00000515160 DRC1Q96MC2 740 aa8.66□□□□□ -1.02
CAST-243ENST00000515160 KCTD15Q96SI1 283 aaPredicted RBP8.66□□□□□ -1.02
CAST-243ENST00000515160 GRIN2AQ12879 1464 aa8.65□□□□□ -1.02
CAST-243ENST00000515160 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.02
CAST-243ENST00000515160 RBCK1Q9BYM8 510 aa8.65□□□□□ -1.02
CAST-243ENST00000515160 KDM6BO15054 1643 aa8.65□□□□□ -1.03
CAST-243ENST00000515160 HECW2Q9P2P5 1572 aa8.65□□□□□ -1.03
CAST-243ENST00000515160 BACH1O14867 736 aa8.64□□□□□ -1.03
CAST-243ENST00000515160 HMGB1P09429 215 aaKnown RBP8.64□□□□□ -1.03
CAST-243ENST00000515160 GAS2L2Q8NHY3 880 aa8.64□□□□□ -1.03
CAST-243ENST00000515160 SREK1Q8WXA9 508 aaKnown RBP8.64□□□□□ -1.03
CAST-243ENST00000515160 SCG3Q8WXD2 468 aaKnown RBP8.64□□□□□ -1.03
CAST-243ENST00000515160 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
CAST-243ENST00000515160 FCF1Q9Y324 198 aaKnown RBP8.64□□□□□ -1.03
CAST-243ENST00000515160 TMEM229AB2RXF0 380 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 C11orf95C9JLR9 678 aaPredicted RBP8.63□□□□□ -1.03
CAST-243ENST00000515160 NDUFB5O43674 189 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 SCTRP47872 440 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 SH3BP2P78314 561 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 TMC7Q7Z402 723 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.63□□□□□ -1.03
CAST-243ENST00000515160 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
CAST-243ENST00000515160 ATAD2Q6PL18 1390 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 S1PR4O95977 384 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 P4HBP07237 508 aaKnown RBP8.62□□□□□ -1.03
CAST-243ENST00000515160 MPSTP25325 297 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 CRIPAKQ8N1N5 446 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
CAST-243ENST00000515160 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 ABCA10Q8WWZ4 1543 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 ERVH48-1M5A8F1 160 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 GDF10P55107 478 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 FGD1P98174 961 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 INTS6LQ5JSJ4 861 aaKnown RBP8.61□□□□□ -1.03
CAST-243ENST00000515160 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 VASH1Q7L8A9 365 aaPredicted RBP8.61□□□□□ -1.03
CAST-243ENST00000515160 CITED4Q96RK1 184 aa8.61□□□□□ -1.03
CAST-243ENST00000515160 ADGRL1O94910 1474 aa8.6□□□□□ -1.03
CAST-243ENST00000515160 WASLO00401 505 aaPredicted RBP8.6□□□□□ -1.03
CAST-243ENST00000515160 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
CAST-243ENST00000515160 BACH2Q9BYV9 841 aa8.6□□□□□ -1.03
CAST-243ENST00000515160 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
CAST-243ENST00000515160 ADCY10Q96PN6 1610 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 SCAMP3O14828 347 aaKnown RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 AXIN1O15169 862 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 TREHO43280 583 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 VARSP26640 1264 aaKnown RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 ERCC5P28715 1186 aaPredicted RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 SCNN1DP51172 638 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 AAMPQ13685 434 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 MRPL58Q14197 206 aaKnown RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 NAALADL2Q58DX5 795 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 C16orf46Q6P387 395 aa8.59□□□□□ -1.03
CAST-243ENST00000515160 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
CAST-243ENST00000515160 TSPOAP1O95153 1857 aa8.58□□□□□ -1.04
CAST-243ENST00000515160 ZBTB24O43167 697 aaPredicted RBP8.58□□□□□ -1.04
CAST-243ENST00000515160 INHAP05111 366 aa8.58□□□□□ -1.04
CAST-243ENST00000515160 HSP90B1P14625 803 aaKnown RBP8.58□□□□□ -1.04
CAST-243ENST00000515160 ITGAEP38570 1179 aa8.58□□□□□ -1.04
CAST-243ENST00000515160 XPCQ01831 940 aaPredicted RBP8.58□□□□□ -1.04
CAST-243ENST00000515160 FMR1Q06787 632 aaKnown RBP eCLIP8.58□□□□□ -1.04
CAST-243ENST00000515160 SUZ12Q15022 739 aaKnown RBP8.58□□□□□ -1.04
CAST-243ENST00000515160 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
CAST-243ENST00000515160 PUS7Q96PZ0 661 aaKnown RBP8.58□□□□□ -1.04
CAST-243ENST00000515160 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
CAST-243ENST00000515160 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
CAST-243ENST00000515160 PPRC1Q5VV67 1664 aaKnown RBP8.58□□□□□ -1.04
CAST-243ENST00000515160 PRG4Q92954 1404 aaPredicted RBP8.57□□□□□ -1.04
CAST-243ENST00000515160 PPP1R12BO60237 982 aaPredicted RBP8.57□□□□□ -1.04
CAST-243ENST00000515160 EPHA4P54764 986 aa8.57□□□□□ -1.04
CAST-243ENST00000515160 PLCB3Q01970 1234 aa8.57□□□□□ -1.04
CAST-243ENST00000515160 SF3A1Q15459 793 aaKnown RBP8.57□□□□□ -1.04
CAST-243ENST00000515160 DMRTB1Q96MA1 342 aa8.57□□□□□ -1.04
CAST-243ENST00000515160 SAP130Q9H0E3 1048 aa8.57□□□□□ -1.04
CAST-243ENST00000515160 GMPR2Q9P2T1 348 aaKnown RBP8.57□□□□□ -1.04
CAST-243ENST00000515160 LDHBP07195 334 aaKnown RBP8.56□□□□□ -1.04
CAST-243ENST00000515160 EIF1AXP47813 144 aaKnown RBP8.56□□□□□ -1.04
CAST-243ENST00000515160 FOXC1Q12948 553 aa8.56□□□□□ -1.04
CAST-243ENST00000515160 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms