RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
TRIM6-211ENST00000515022 KIF20BQ96Q89 1820 aa11.75□□□□□ -0.53
TRIM6-211ENST00000515022 PHKG2P15735 406 aa11.75□□□□□ -0.53
TRIM6-211ENST00000515022 DDR1Q08345 913 aa11.75□□□□□ -0.53
TRIM6-211ENST00000515022 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
TRIM6-211ENST00000515022 EYA1Q99502 592 aa11.74□□□□□ -0.53
TRIM6-211ENST00000515022 KDRP35968 1356 aa11.74□□□□□ -0.53
TRIM6-211ENST00000515022 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
TRIM6-211ENST00000515022 COL5A3P25940 1745 aaPredicted RBP11.73□□□□□ -0.53
TRIM6-211ENST00000515022 IFNL2Q8IZJ0 200 aa11.73□□□□□ -0.53
TRIM6-211ENST00000515022 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
TRIM6-211ENST00000515022 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
TRIM6-211ENST00000515022 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.53
TRIM6-211ENST00000515022 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.53
TRIM6-211ENST00000515022 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
TRIM6-211ENST00000515022 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
TRIM6-211ENST00000515022 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
TRIM6-211ENST00000515022 POTECB2RU33 542 aa11.69□□□□□ -0.54
TRIM6-211ENST00000515022 FOXN1O15353 648 aa11.69□□□□□ -0.54
TRIM6-211ENST00000515022 SLC34A2O95436 690 aa11.69□□□□□ -0.54
TRIM6-211ENST00000515022 CRKLP46109 303 aaKnown RBP11.69□□□□□ -0.54
TRIM6-211ENST00000515022 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
TRIM6-211ENST00000515022 CARD14Q9BXL6 1004 aa11.69□□□□□ -0.54
TRIM6-211ENST00000515022 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
TRIM6-211ENST00000515022 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
TRIM6-211ENST00000515022 AFDNP55196 1824 aaKnown RBP11.68□□□□□ -0.54
TRIM6-211ENST00000515022 POLRMTO00411 1230 aaKnown RBP11.68□□□□□ -0.54
TRIM6-211ENST00000515022 LMNB1P20700 586 aa11.68□□□□□ -0.54
TRIM6-211ENST00000515022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRIM6-211ENST00000515022 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
TRIM6-211ENST00000515022 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
TRIM6-211ENST00000515022 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
TRIM6-211ENST00000515022 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
TRIM6-211ENST00000515022 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
TRIM6-211ENST00000515022 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
TRIM6-211ENST00000515022 CABP4P57796 275 aa11.67□□□□□ -0.54
TRIM6-211ENST00000515022 KDM6AO15550 1401 aaPredicted RBP11.67□□□□□ -0.54
TRIM6-211ENST00000515022 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
TRIM6-211ENST00000515022 ZNF831Q5JPB2 1677 aa11.66□□□□□ -0.54
TRIM6-211ENST00000515022 ERVV-2B6SEH9 535 aa11.66□□□□□ -0.54
TRIM6-211ENST00000515022 NFKBIEO00221 500 aa11.66□□□□□ -0.54
TRIM6-211ENST00000515022 TM4SF1P30408 202 aa11.66□□□□□ -0.54
TRIM6-211ENST00000515022 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
TRIM6-211ENST00000515022 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
TRIM6-211ENST00000515022 EIF4A2Q14240 407 aaKnown RBP11.65□□□□□ -0.54
TRIM6-211ENST00000515022 ZNF530Q6P9A1 599 aaPredicted RBP11.65□□□□□ -0.54
TRIM6-211ENST00000515022 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.54
TRIM6-211ENST00000515022 TJP1Q07157 1748 aa11.65□□□□□ -0.54
TRIM6-211ENST00000515022 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
TRIM6-211ENST00000515022 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
TRIM6-211ENST00000515022 POLKQ9UBT6 870 aa11.64□□□□□ -0.55
TRIM6-211ENST00000515022 ADAMTS7Q9UKP4 1686 aa11.64□□□□□ -0.55
TRIM6-211ENST00000515022 ZC3H4Q9UPT8 1303 aaKnown RBP11.63□□□□□ -0.55
TRIM6-211ENST00000515022 ZPR1O75312 459 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 NFIXQ14938 502 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 TTLL6Q8N841 843 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
TRIM6-211ENST00000515022 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
TRIM6-211ENST00000515022 LBX1P52954 281 aa11.62□□□□□ -0.55
TRIM6-211ENST00000515022 CCDC24Q8N4L8 307 aa11.62□□□□□ -0.55
TRIM6-211ENST00000515022 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
TRIM6-211ENST00000515022 DICER1Q9UPY3 1922 aaKnown RBP11.62□□□□□ -0.55
TRIM6-211ENST00000515022 SERPINB2P05120 415 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
TRIM6-211ENST00000515022 VEGFBP49765 207 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 MTHFSP49914 203 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
TRIM6-211ENST00000515022 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 PRDM10Q9NQV6 1147 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
TRIM6-211ENST00000515022 C21orf2O43822 256 aa11.6□□□□□ -0.55
TRIM6-211ENST00000515022 DDNO94850 711 aaPredicted RBP11.6□□□□□ -0.55
TRIM6-211ENST00000515022 HSP90AB1P08238 724 aaKnown RBP11.6□□□□□ -0.55
TRIM6-211ENST00000515022 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
TRIM6-211ENST00000515022 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
TRIM6-211ENST00000515022 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRIM6-211ENST00000515022 AIDAQ96BJ3 306 aa11.6□□□□□ -0.55
TRIM6-211ENST00000515022 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
TRIM6-211ENST00000515022 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
TRIM6-211ENST00000515022 CACNA1SQ13698 1873 aa11.59□□□□□ -0.55
TRIM6-211ENST00000515022 H0YIN7 160 aa11.59□□□□□ -0.55
TRIM6-211ENST00000515022 ABHD8Q96I13 439 aa11.59□□□□□ -0.55
TRIM6-211ENST00000515022 NRXN2Q9P2S2 1712 aa11.59□□□□□ -0.55
TRIM6-211ENST00000515022 ANKRD31Q8N7Z5 1873 aa11.59□□□□□ -0.55
TRIM6-211ENST00000515022 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
TRIM6-211ENST00000515022 SLC39A6Q13433 755 aa11.58□□□□□ -0.56
TRIM6-211ENST00000515022 C1orf141Q5JVX7 400 aa11.58□□□□□ -0.56
TRIM6-211ENST00000515022 NARFQ9UHQ1 456 aa11.58□□□□□ -0.56
TRIM6-211ENST00000515022 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
TRIM6-211ENST00000515022 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
TRIM6-211ENST00000515022 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
TRIM6-211ENST00000515022 CCER1Q8TC90 406 aaPredicted RBP11.57□□□□□ -0.56
TRIM6-211ENST00000515022 POLR3GLQ9BT43 218 aa11.57□□□□□ -0.56
TRIM6-211ENST00000515022 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
TRIM6-211ENST00000515022 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
TRIM6-211ENST00000515022 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms